Entamoeba histolytica: EHI_022940
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Entry
EHI_022940 CDS
T00238
Symbol
81.t00015
Name
(RefSeq) DNA-directed RNA polymerase subunit
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
ehi
Entamoeba histolytica
Pathway
ehi03020
RNA polymerase
ehi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ehi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EHI_022940 (81.t00015)
09124 Replication and repair
03420 Nucleotide excision repair
EHI_022940 (81.t00015)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ehi03021
]
EHI_022940 (81.t00015)
03400 DNA repair and recombination proteins [BR:
ehi03400
]
EHI_022940 (81.t00015)
Enzymes [BR:
ehi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EHI_022940 (81.t00015)
Transcription machinery [BR:
ehi03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
EHI_022940 (81.t00015)
DNA repair and recombination proteins [BR:
ehi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
EHI_022940 (81.t00015)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Endotoxin_N
JHY
Motif
Other DBs
NCBI-GeneID:
3407800
NCBI-ProteinID:
XP_653488
UniProt:
C4LUK7
LinkDB
All DBs
AA seq
1170 aa
AA seq
DB search
MQANLPSQQIQPEQFWYLIDAHFKENGLVKQQLSSYNNFIKKVRDVITSDTTKIEISNAE
VLGISANDEEEHTIVLTDPIFHFPKVSTGSKASASLFPHEARLRSLTYSCQLEVKAKDTI
RKNGAEEITTVPKIDIASIPSMLKSDVCRLKRCVTQPSMINKDECSFEQGGYFIIKGSEK
VVIAQEKMAPNTVLVFEGSDQLKYPYEGNINSLASNDEVRTHKIRMDYPKLDKSRLKIKV
PVLSLSRMDCDVPVVLLFVALGYENDQKIVEAICFDENDNEMYNIVTTAIQANECTTTED
ARRWLGEHSKKTNKEGVIEIVSENIQKLQRDGTEKLKKDLLPHIGTDNFESKAQFLGYMT
NHFLSVYTGKRNGDDRDHLARKRMLMTGGLMMELFKNSLKRMMKTARAQLQKQLSSNKAL
EYAKPLSFPTITTDFTKALGTGNWPQPGGKESRHGVAQVLSRLTFTSALAYLRKISSPVE
GKRKTQKPRQLHNTQWGYICPAETPEGESCGLVKMLSLMAQITVALQDEQVDEIKEALDC
QYVCNINDCTGEKMNNITKVFLNGVWLKCSEQPQKLLEELKNYRKNSTKGKVKKVMSMVL
DQLHKELRIYTDAGRCTRPLFTVSNNNGHYTLNLKQSQITELCSRLDNESNGTEKTKFWN
NFLSKGIIEYVDADEEEMSMIAMFPSDLDNTEGGSSKNYTHCEIHPALVMGVLGSIIPFP
DHNQSPRNTYQCAMGKQAIGVYASNYQLRLDSLGHVLFYPQKPLVSTRAAEYVKFGHIPA
GINAIVAVCCYSGYNQEDSVMMNQGSIDRGLFRSMAFKTFSEDAKKSETTELMFFKPSEN
NSEITEDISKYEKVDVDGILAPGTKVKPDDILVAGFYENKNKTLKDCSLRYKPRENGVVD
QVVVTNAQSGTKYIRVKMRSIRIPQIGDKFSSRHGQKGTVGMTYRQEDMPFTIEGISPDI
IMNPHAIPSRMTVGQLVECLLGKVGALVGDVQSGTPFQKDVTVDRIGERLHKLKYQRRGY
EALFSGHTGRKLDSLVYIGPTYYQRLKHLVDDKVHGRATGPYATLTRQPLEGRSRDGGLR
LGEMERDCMISHGVSSLLKERLFLASDKYQIYVCDKCHMPAVANHKACTFQCSCCKDKTH
ISKVDIPYACKLLFQELMSMAVCPRIYTEV
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcaaatcttccctcacaacaaattcaacctgaacaattttggtatttaattgat
gctcattttaaagaaaatgggttagtaaaacaacagctatcatcatataataatttcatt
aaaaaagtaagggatgttattacaagtgatacaactaaaattgaaataagtaatgcagaa
gttttaggaataagtgctaatgatgaagaagaacatacaattgtattaacagatccaatt
ttccattttccaaaagtttctactgggtctaaggcaagtgcttctttattccctcatgag
gctagattaagaagtttaacgtattcttgtcaacttgaagtaaaagccaaagatacaata
agaaaaaatggagcagaagaaattacaacggtaccaaaaattgatatagcaagtattcca
tctatgttaaagtctgatgtttgtagattaaaaagatgtgtaacacaaccatctatgatt
aataaagatgaatgttcatttgagcaaggtggatatttcattattaaaggaagtgaaaag
gtagttattgcacaagaaaagatggcaccaaatacagttttagtttttgaagggagtgat
caattaaaatatccatatgaaggaaatattaatagtttagcatcaaatgatgaagttaga
acccataaaattagaatggattatccaaaattagataagtcaagacttaaaattaaagtt
cctgttttaagtcttagtcgtatggattgtgatgttccagttgtattactttttgttgca
ttaggatatgaaaatgatcaaaaaatagtagaggctatttgctttgatgaaaatgataat
gaaatgtataatattgttactactgctattcaagcaaatgaatgtacaactacagaagat
gcaagaagatggcttggagaacattcaaagaaaacaaataaagaaggagtaattgaaatt
gtatccgaaaatatacaaaaattacaaagagatggaacagaaaaattaaagaaagattta
cttccacatattggaacagataattttgaatcaaaagcacaatttttaggatatatgaca
aaccatttcttatcagtttatacaggaaaaagaaatggagatgatagagatcatttagca
agaaaaagaatgttaatgacaggaggattgatgatggaattatttaagaattcattaaaa
cgaatgatgaaaacagcaagagctcaattacaaaaacaattatcaagtaataaagcatta
gaatatgctaaaccactttcatttccaacaattacaacagattttacaaaagcattagga
acaggaaattggccacagccaggaggaaaagaatcaagacatggagtagcacaagtatta
agtagattaacatttacatcagcattagcatatttaagaaaaatttcatcaccagttgaa
ggaaaaagaaaaacacaaaaaccaagacaattacataatacacaatggggatatatttgt
ccagctgaaacaccagaaggagagtcatgtgggttagttaaaatgttatcattaatggca
caaattactgttgctttacaagatgaacaagttgatgaaattaaagaagcattagattgt
caatatgtttgtaatattaatgattgtacaggagaaaaaatgaataatattactaaagtc
tttttaaatggagtatggttaaaatgttctgaacaaccacaaaaattattagaagaatta
aagaattatagaaagaatagtacaaaaggaaaagtaaaaaaggtaatgtctatggttctt
gatcaacttcataaagaattacgtatttacactgatgctggtcgatgtacaagaccatta
tttacagtaagtaataataatggacattatacattaaatttaaagcaaagtcaaattaca
gagttatgtagtagattagataatgaaagtaatggaacagaaaaaacaaagttttggaat
aatttcttatcaaaaggaattattgaatatgttgatgctgatgaagaagaaatgtctatg
attgctatgttcccatcagacttagataatacagaaggaggttcaagtaaaaattatact
cattgtgaaattcatccagcattagttatgggagtattaggatctattattccattccct
gaccataaccaatctcctagaaatacatatcaatgtgctatgggtaaacaagcaattgga
gtgtatgcatcaaattatcaattaagattagattcattaggacatgttcttttttatcca
caaaaaccattagtatcaacaagagcagctgaatatgtcaaatttggacatattccagca
ggaattaatgctattgttgctgtttgttgttattcaggttataatcaagaggatagtgtt
atgatgaatcaaggatcaattgatagaggattattcagatcaatggcatttaaaacattt
agtgaagatgctaaaaagtcagaaacaacggaattaatgttctttaaaccaagtgaaaat
aattcagaaattactgaagatataagtaaatatgaaaaagttgatgttgatggtatttta
gcacccggaactaaagttaaaccagatgatattttggttgctggattttatgaaaataaa
aataaaacattaaaagattgttcattaagatataaaccaagagaaaatggtgttgttgat
caagttgttgtcactaacgctcagtcaggaacaaaatatattcgagttaaaatgagaagt
ataagaattccacaaattggagataaattctcttcaagacatggacaaaaaggaacagtt
ggtatgacttatagacaagaagatatgccatttacaattgaaggaatttcaccagacatc
attatgaacccacatgctattccatctcgtatgacagttggacaattagtagaatgttta
cttggaaaagtaggggcattggtaggagatgttcaaagtggtacaccattccaaaaagat
gtaacagttgatagaattggagaaagattacataaactaaagtatcaaagaagaggatat
gaggcattatttagtggacatactggtagaaaattagatagtcttgtttatattggacca
acatattatcaacgattaaaacatcttgtagatgataaagttcatggaagagcaactgga
ccatatgctactctcacaagacaaccactagaaggaagatcaagagatggaggattacgt
ttaggggagatggagagagattgtatgatttcacatggtgttagttctctattaaaagaa
agattattccttgcatctgataagtatcaaatttatgtttgtgataaatgtcatatgcca
gcagtagcaaatcataaagcatgtacattccaatgttcttgttgtaaagataaaactcat
atttcaaaagttgatattccatatgcttgcaaattattattccaagaattaatgtcaatg
gcagtttgtcctagaatttatactgaagtttaa
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integrated database retrieval system
