KEGG   Entamoeba histolytica: EHI_095890
Entry
EHI_095890        CDS       T00238                                 
Symbol
310.t00009
Name
(RefSeq) DNA-directed RNA polymerase I largest subunit
  KO
K02999  DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]
Organism
ehi  Entamoeba histolytica
Pathway
ehi03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ehi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    EHI_095890 (310.t00009)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ehi03021]
    EHI_095890 (310.t00009)
Enzymes [BR:ehi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     EHI_095890 (310.t00009)
Transcription machinery [BR:ehi03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     EHI_095890 (310.t00009)
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_1 RNA_pol_Rpb1_4
Other DBs
NCBI-GeneID: 3403683
NCBI-ProteinID: XP_649386
UniProt: C4M3E6
LinkDB
AA seq 1570 aa
MSSVELRKTFQESPVEITSTGFDFYSADEIRHMSVKEITKGTSFDLLGNQELEGLYDPAL
GVFGKNTICPTCGLTEEGCPGHFGHFELEEPMYQPLLLTELLKLLRSICMKCHSLKASKQ
VILGAAIEFERLAKNDIEGAMDIHGLVKEAQYIQRKANASRGKLKREQIEDEENLTVERE
VDKELESIFKKECGKGIKKDISFIHTDTHCKAVRNELIAHMVALKDKPCPYCKTVSPKIV
LNDSKTGFVFYGENTDAAKNRSEHKYETTPSYIMNILKEAWGHNEIQNEVLSRMYYSQMR
GGEKLDVIVPSYHMFFVEVLPIPPSRFRQLNKFGDLISDHPQSIYYRTIIESSNALKVRR
EGTALDYPEKYFIDQMQKAYNLLILTGNADEGISMKSILEHKKGLFRNNMMGKRVNYAAR
TVISPDPFLPTNTIGMPLPFAMRLTIAVPVNERNYEEMKQAVINGPQVWPGALYIENEWG
HKIVLLDDSNPYNKTKRQGEAERLLVIDPKAPRSFKTVFRHVIDNDMVLSNRQPTLHKPG
IMGHYVKVLKIEKTIRMHYANCNTFNADFDGDEMNLHLPQSMEARSEVMNIALSDEQYVV
PKNGQPLRGLIQDHVISSFMLTKRDTFFTKEEYCQIVYTALYGIYEQYSIRIPMPAILKP
IPKWTGKQVVTAILMHISTNHCTINFEGKCKVSTNEINRGGYQTKKERKLMKQKDEFTEK
WSGANDSLCIIKDSQMLTGTLDKNQIGASNQSLIHAIYELYNGKVSGMCLTLLSRLLTTY
LQRIGHTCSLDDCMLKPEFDNKRTEMLNKTNELARTAIAKHFKLEGHSKYDIDLALANAR
RRPQLSKELDDAVKTEVNECTSNVIKECIPYGQLRAFPWNSLALMTTTGAKGSKVNHSQI
TCLLGQQELEGRRVPVMATGKTLPSFPRYDTSARAGGFIASRFLTGVPPQEFFFHCMAGR
EGLIDTAVKTASSGYLQRCVIKMLESLHVEYDYSVRESDGSIIEFMYGDDGIDVMKSGFL
NNIDFWANNYDALVSKYETKAILSKFKKGFSRACKLQKKCLRHPEKYEPVQSIYSPSNNL
AAVSEKYYKLINDYIKEDKRGEFKSGKLDPETFKVMMMLKYNKSLINPGEPVGVLAGQSI
GEPSTQMTLNTFHLAGRGDVNVTLGMPRIKELVMFAKKEIATPSMILYLKEPNQKNTEKL
AKLLTKVTLANIIEGIKCLDSIIVHEGQRRRQYTIDLTLIDKYEEVVDFNTTEITKKIKS
VLMNEIAKRQQSKVGIDIDYKGVSGEEAEEKVNEESEDVQEKINKGKVIEEEVPEEEQNE
MSEEEIETEEKSGSSSSSEEEEKEEKKSPLEEEKEEIKEKPNLVEKEEKGKKQHLVVSVL
LNVNDKVSMVSVVEKVIEKIILYECPHIVRGIPLSKKKEGRTIYYVMTEGVNFRAALQFG
NLVDVDTVETNDVYAVLNMYGVEAARTVLIHEIDSVFKAYGIDVDPRHLNLVADYMTYEG
EYKSLNRSGMDHNPSPFTKITFETSLGFLAKTCVSGQKDNLRSPSGSVVMGKNMVFGTGA
FDIYTELSDE
NT seq 4713 nt   +upstreamnt  +downstreamnt
atgtcatcagttgagctaagaaaaacttttcaagaatcaccagttgaaattacatcaaca
ggatttgacttttattcagctgatgaaatacgacatatgagtgtaaaagaaattacaaaa
ggaacatcatttgatttattaggaaatcaagaattagaaggactttatgatccagcactt
ggagtttttggtaaaaatactatttgtccaacatgtggacttactgaagaaggatgtcca
ggacattttggacattttgaacttgaagaaccaatgtatcaaccactattattaacggaa
ttattaaaattattacgatcaatttgtatgaaatgtcattcattaaaagcatcaaaacaa
gtaattcttggagcagcaattgaatttgaacggttagcaaaaaatgatattgaaggagca
atggatattcatggattagttaaagaagcacaatatatccaaagaaaagcaaatgcatca
agaggaaaattaaaaagagaacaaattgaagatgaagagaatttaacagttgaacgagaa
gttgataaagaattagaaagtatatttaagaaagaatgtggaaaaggaattaagaaagat
atatcttttattcatacagatactcattgtaaagcagttagaaatgaacttattgcacat
atggtagcattaaaagataaaccatgtccatattgtaaaacagtatcaccgaagattgta
ttaaatgattcaaagacaggatttgtattttatggagaaaatacagatgcagctaaaaat
cgaagtgaacataagtatgaaacaacaccatcatatataatgaatattcttaaagaggca
tggggacataatgaaatacaaaatgaagtattaagtagaatgtattatagtcaaatgaga
ggaggagagaaattagatgttattgtaccaagttatcatatgttttttgtagaagttctt
ccaattccaccaagtagatttagacaattaaataaatttggggatttaattagtgatcat
ccacaaagtatatattatagaacaattattgaatcaagtaatgcattaaaagtgagaaga
gaaggaacagcattagattatccagaaaagtattttattgaccaaatgcaaaaagcatat
aatttattaattcttacaggaaatgcagatgaaggaatatcaatgaaaagtattttagaa
cataaaaaaggattatttagaaataatatgatgggtaaaagagttaattatgcagcacgt
acagttatttcaccagatccatttcttccaacaaatacaattggaatgccacttccattt
gctatgagattaacaattgcagttccagtaaatgaaagaaattatgaagaaatgaaacaa
gcagttatcaatggaccacaagtatggccaggagcattatatattgaaaatgaatgggga
cataaaattgtattattagatgatagtaatccatataataaaacaaaaagacaaggagaa
gcagaaagattacttgttattgatccaaaagcaccaagaagttttaaaacagtatttaga
catgttattgataatgatatggtattatcaaatagacaaccaacattacataaaccagga
attatgggacattatgttaaagtcttaaaaatagaaaaaacaattcgtatgcattatgct
aattgtaatacatttaatgcagattttgatggagatgaaatgaatttacatcttccacaa
agtatggaagcaagaagtgaagtaatgaatattgcattatcagatgaacaatatgttgtt
ccaaagaatggacaaccattaagaggacttatacaagatcatgtcatttcatcatttatg
ttaacaaaacgagatacattctttacaaaagaagaatattgtcaaattgtttatactgca
ttatatggaatatatgaacaatattctattagaattccaatgccagctattcttaaacca
ataccaaaatggacaggaaaacaagttgtaacagcaattttaatgcatattagtacaaat
cattgtacaattaattttgaaggaaagtgtaaagtatcaacaaatgaaattaatcgagga
ggatatcaaacaaaaaaagaaagaaaattaatgaaacaaaaagatgaatttacagagaaa
tggagtggagctaatgatagtttatgtataattaaagattcacaaatgttaacaggaaca
ttagataaaaatcaaattggagcatcgaatcaaagtttaattcatgcaatttatgaatta
tataatggtaaagtttcaggaatgtgtcttactttattatcaagattattaacaacatat
ttacaaagaattggacatacttgttcattagatgattgtatgttaaaaccagaatttgat
aataaacgaacagaaatgttaaataaaacaaatgaattagcacgtactgctatagccaaa
cattttaaattagaaggacattctaaatatgatattgatcttgcacttgctaatgctaga
agaagaccacaactttcaaaagaacttgatgatgcagttaaaacagaagttaatgaatgt
acatcaaatgtaattaaagaatgtattccatatggacaattaagagcatttccatggaat
agtcttgccttaatgacaacaacaggagcaaaaggatcaaaagttaatcattcacaaatt
acttgtttacttggacaacaagaattagaaggaagaagagtaccagttatggcaacaggt
aaaacattaccatcattcccacgatatgatacatcagcaagagcaggaggatttattgca
tcaagattccttacaggagttccaccacaagaattctttttccattgtatggcaggaaga
gaaggattaattgatacagcagttaagactgcaagttctggatatcttcaacgatgtgta
attaaaatgttagaatcattacatgtagaatatgattattcagtaagagaatcagatgga
tcaattatagaatttatgtatggagatgatggaattgatgtaatgaaaagtggatttctt
aataatattgatttttgggcaaataactatgatgcattagtttcaaaatatgaaacaaaa
gctattctttcaaagtttaaaaaaggattttcaagagcatgtaaattacaaaagaaatgt
ttaagacatccagaaaaatatgaaccagttcaaagtatttattcaccaagtaataatctt
gcagctgtaagtgaaaagtattataaattaattaatgattatattaaagaagataaaaga
ggagaatttaaaagtggtaaacttgatccagaaacatttaaagttatgatgatgttaaaa
tataataaatcattaattaatcctggagaacctgttggtgttttagcaggtcaatctatt
ggagaaccatcaacacaaatgacattaaatacattccatttagcaggaagaggagatgtt
aatgttacattaggtatgcctcgtattaaagaattagtaatgtttgctaaaaaagaaatt
gctacaccatcaatgattctttatttgaaagaaccaaatcaaaaaaatacagaaaaatta
gctaaattattaactaaagttacattagctaatattatagaaggaattaaatgtttagat
tctatcattgttcatgaaggacaaagaagaagacaatacactattgatcttactcttatt
gataaatatgaagaagttgttgattttaatacaacagaaattactaaaaaaattaaatca
gttttaatgaatgaaattgcaaaaagacaacaaagtaaagttggaattgatattgattat
aaaggtgttagtggagaagaagctgaagaaaaagttaatgaagaaagtgaagatgttcaa
gaaaaaattaataaaggaaaagttattgaggaagaagtacctgaagaagaacaaaatgaa
atgagtgaagaagaaatagaaactgaagaaaaaagtggatcatcatcatcctcagaagaa
gaagagaaagaagaaaaaaaatcaccattagaagaagaaaaagaagaaataaaagaaaaa
ccaaaccttgtagaaaaagaagaaaaaggtaaaaaacaacatcttgttgtgagtgtatta
cttaatgttaatgataaagtatcaatggtatctgttgtagaaaaagttattgaaaagatt
attttatatgaatgtccacatattgttagaggtattcctttaagtaaaaagaaagaagga
cgtactatttactatgttatgactgaaggagttaatttccgagctgctcttcaatttggt
aatttagttgatgttgatacagttgaaactaatgatgtatatgctgtattaaatatgtat
ggtgttgaagctgcacgtactgttcttattcatgagattgattctgtgtttaaagcatat
ggtattgatgtcgatccaagacatttgaatcttgttgcagattatatgacgtatgaagga
gaatacaagtcattgaatagatctggtatggatcataatccatctccattcactaaaata
acatttgaaacatcacttggattcttagctaaaacttgtgtttcaggtcaaaaagataat
ttaagaagtccatcagggtcagttgtaatgggtaaaaatatggtatttggaacaggtgca
tttgatatttacactgaactaagtgatgaataa

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