Entamoeba histolytica: EHI_193340
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Entry
EHI_193340 CDS
T00238
Symbol
139.t00016
Name
(RefSeq) mutS family protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
ehi
Entamoeba histolytica
Pathway
ehi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ehi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
EHI_193340 (139.t00016)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ehi03400
]
EHI_193340 (139.t00016)
DNA repair and recombination proteins [BR:
ehi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
EHI_193340 (139.t00016)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_II
AAA_28
MutS_IV
Motif
Other DBs
NCBI-GeneID:
3406247
NCBI-ProteinID:
XP_651951
UniProt:
C4M4T8
LinkDB
All DBs
AA seq
934 aa
AA seq
DB search
MSIQSKLKFKDGMFNTTKREELHKQIETEIGNERYSFLINIKDKNQKSIGEQGYDPSTLF
IPASCLMKMTPFEKQYWNIKKDNYDVVIFFAKGKFYELYENDADIGNKELGLKITNRVNM
RMAGVPKASFNTYASKLLELGYKIGCVDEKETSEESKKRGATVIVNGKREPNIVRRELTR
IYTVSTATEPELCSDTSDMFCMAIISNGCNVGVCYGDVSVGRIFLGYLEDTELHNSLHTL
LHRVHPKEILLLNSISDDIAHICKNLKFAEITYVKEPEDINGVLPLFADRGRVPKVVEKY
STNDQVMTAFTVLYNYFTTLLVPKTTIINGTFGEYTTLSQDYLIVDAQSIVNLALFASKG
KEVEGTLLHFVDNCFTAFGKRMLRERFLLKPLMDVNKILHRQEVVEFFLENNDLIDQIGT
FLRVIPDLERLLSQCTSSTITESNFIRMISGFETCQKLMNELKTIVKDMPEVLQTIVLDK
NNLGYPNLEEFISKLESIYDFTSAKEEHAITFFNGYNEEIDHAFERRNELENEFAKELVS
IKKIFGEAKYVNIGGDDHLIALPIKQYESYLKKHAKLPSGYTEANKIKSEARLMSSKVSS
IQTEYDLNEKQINDSHHTLFNQLINEVSSTLVLPRAITNIGLIDCFVSMARCSQSMETSC
LPSFIKNGMIYSYRKDPEPTSITTPYFNAKQLKHPYLTVSTKTSAIPSNIILGGTDPQTI
ILTGPNMGGKSTLLRTVCLAVIMAQMGMRCTGEEITMSVVDHIFTRIGASDDILHGMSTF
MVELDETAQMLHDATQNSLVVLDELGRGTSTHDGLAIAHAVVEYTVSKIKPLMIVSTHYH
QLCEEFEERGDVKLSHMGCTIQNNQIIFLYTLLDGACPKSYGMKVAEMAGLPTKIVHRAE
NIATWFELYSWWKDNEDAQTFTKIVCTNKRIFEQ
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgagtatccaatctaaattaaagtttaaagatggaatgttcaatacaactaaacgagaa
gaattacataaacaaatagaaacagaaattggaaatgagagatactcctttctaattaat
atcaaagataaaaatcagaaaagtattggagaacaaggatatgatccatctacattattt
attcctgcaagttgtttgatgaaaatgacaccatttgaaaaacagtattggaacataaag
aaagataattatgatgttgtaattttctttgctaaaggaaagttttatgaattatatgaa
aatgatgctgatatcggtaacaaagaattaggacttaaaattactaacagagttaatatg
agaatggctggtgtaccaaaagcatcattcaatacatatgcatcaaaattactggaatta
ggatataaaataggttgtgtagatgaaaaagaaacttcagaagaatcaaagaaaagagga
gcaactgtaattgtcaatggcaaaagagaaccaaacattgttcgtagagagttgacaaga
atatatactgtttctactgcaacagaaccagagttatgttctgatactagtgatatgttt
tgtatggctattatatcaaatggatgtaatgttggagtgtgttatggtgacgtttctgta
ggtagaatattcttaggatacttagaagatacagaattacataatagtcttcatacttta
ttacatagagtacatccaaaagaaatattattattaaatagtatttcagatgacattgct
catatctgtaaaaatcttaaatttgcagaaataacatatgtaaaagagcctgaagatatc
aatggagtattgccattatttgctgacagaggaagagtacctaaagttgttgagaaatat
agtactaatgatcaagtaatgactgcttttactgttctttataattattttactacttta
ttagtcccaaagacaacaataattaatggaacttttggagaatatacaacactgtctcaa
gactatcttattgttgatgcacagagtattgttaatttagctttatttgctagtaaagga
aaagaagtagaaggtacacttcttcattttgtagacaattgttttacagcatttggtaaa
cgaatgttacgagaaagatttttattaaaaccattaatggatgttaataagattcttcat
cgacaagaagtagttgaattctttttagaaaataatgatttgattgatcaaataggaaca
tttttaagagtgatacctgacctagaacgattattaagtcaatgtacatcatcaacaata
actgagtctaattttattcgtatgatatcaggatttgagacatgtcaaaaattaatgaat
gaattaaagactatagtaaaagatatgccagaggtacttcaaacaattgttttagataaa
aacaatttaggatatcctaaccttgaagaatttatttctaagttagaaagtatatatgat
tttacaagtgcaaaagaagaacatgccattaccttctttaatggatataatgaagaaata
gatcatgcttttgaaagaagaaatgaattagaaaatgaatttgctaaagaattagtttca
attaaaaaaatctttggagaagcaaagtatgtaaatattggaggtgatgatcatttaatt
gcattaccaattaaacaatatgaatcttatctaaaaaaacatgctaaattacctagtgga
tatactgaagccaataaaatcaaaagtgaagcaagactcatgagttctaaagttagtagt
atccaaacagagtatgatttaaatgaaaaacaaattaatgactctcatcatactttattt
aatcaattaatcaatgaagtgtcaagtactttagtattgccaagagcaattactaatatt
ggattgattgactgttttgtttcaatggctcgctgttctcaatcaatggaaacatcatgt
cttccttctttcattaaaaatggaatgatttattcatatagaaaagatcctgaaccaaca
tccattacaactccatactttaatgcaaaacaattaaaacatccatatttaactgtatca
actaaaacaagtgctatcccctctaatattattcttggtggtactgaccctcaaactatt
attttaactggaccaaatatgggaggtaaatctacactattaagaacagtctgtcttgct
gttattatggctcaaatgggtatgagatgtactggtgaagaaattaccatgtcagttgtt
gatcatatcttcactcgtattggagcttccgacgatattttacatggaatgagtactttt
atggtagagttagatgaaacagcccaaatgttacatgatgccacacaaaattcgttagtt
gtattagacgaactaggaagaggcacatccactcatgatgggttagctattgctcatgca
gtagttgaatatacagtctcaaaaattaagccattaatgattgtttcaacacattaccat
caattatgtgaagaatttgaagaacgtggagatgttaaattaagtcatatgggatgtaca
attcaaaacaatcaaataatttttttgtacacattattagatggggcatgtccaaaatct
tatggtatgaaagtagctgaaatggcaggacttccaactaaaatagttcatcgagcagaa
aatatcgcaacatggtttgaattatattcatggtggaaagacaatgaagatgcccaaaca
tttacaaagatagtttgtacaaacaaacgaatatttgaacaataa
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