Eurypyga helias (sunbittern): 104514933
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Entry
104514933 CDS
T08356
Symbol
MSH6
Name
(RefSeq) LOW QUALITY PROTEIN: DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
ehs
Eurypyga helias (sunbittern)
Pathway
ehs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ehs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104514933 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ehs03400
]
104514933 (MSH6)
DNA repair and recombination proteins [BR:
ehs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
104514933 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
PWWP
MutS_II
Motif
Other DBs
NCBI-GeneID:
104514933
NCBI-ProteinID:
XP_010157051
LinkDB
All DBs
Position
Unknown
AA seq
1158 aa
AA seq
DB search
MEGYPWWPCLIYDHPTERTIVRGKGKSTRVHVQFFDDSPTRGWVSIKYVRPYKGSSDGET
LKGGMFYSTKPEIKRAMVLADDAMSKDKTKRLQLAVCNEPSDTEEEEEEEMEVNESGSGN
SDDDNSEEDVKSNKRAMSRESSVKAKRRRVLDSDSERDGSDVEFQPDAKEAASSEEASSG
VDENESADAESDAESVAESPIKVPSKRKRRDANKPAKRSSLENAHSETPKRAATVSLEAK
SKLTSFAAPESFESQANACSGGTGGFAVWEHEKLDWLQEGKRKDAHRKQQGDPDYDPCTL
YVPEGYLNKCTPGMRRWWQLKSQNFDAVIFYKVGKFYELYHMDAVTGVNELGLIFMKGTW
AHSGFPETAFGRFSDVLVQKGYKVARVEQTETPEMMETRCKSSAHPTKFDRVVRREICRI
ITKGTQTYSVLDCDPSENHSKYLLCVKEKEDSSGQRVYGVCFVDTSVGKFYVGQFADDRH
CSRFRTLVAHYTPVQVLYEKGNLTVDTQKILKGSLVSCIQEGLISGSQFWNASKTLKVLL
EEGYFKEKQNSDDGCSLPSVIKSLTSESDSLGLTPGENGELALSALGGCVFYLKRCLIDQ
ELLSLANFEEYVPVDVDTAKTKSSSSFFARTDQRMVLDGVTLMNLEVLQNGTNGTTEGTL
LERIDSCCTPFGKRLLKQWLCAPLCNPKSINDRLDAVEDLLAVPDKTTEVSEHLKKLPDL
ERLLSKIHSIGSPLKSQNHPDSRAIFYEEVKYSKKKIADFLSALEGFKVMNEIVDVMEEI
ASDFKSKVLRQLLTRKAKNPDGRFPDLSAELRRWDTAFDHNQARKTGVITPKAGFDPDYD
KALQDIKAVEEDLHKYLDKQRKLLGFKSVLYWGAGKNRYQMEIPESVXXXXEEYELKSSR
KGYKRYWTKEIERMLAAMVSAEERRDAALKDCMRRLFYNFGRNSRDWQTAVECIAVLDVL
MSLATYSKDGDGPLCRPVILLPAESAPPFLELKNSRHPCITKTFFGDDFIPNDIVIGSKD
EESSSEASCVLVTGPNMGGKSTLMRQAGLLVVMAQLGCYVPAEVCRLTPIDRVFTRLGAS
DRIMSGESTFFVELSETSSILQHATVHSLVLVDELGRGTATFDGTAIASAVVKELAEKIK
CRTLFSTHYHSLVEDYAR
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atggaaggttatccttggtggccgtgtctcatatacgaccacccgactgaaagaacgata
gtcagaggaaaagggaaatccactcgtgtccacgtacagttctttgacgacagccctacg
aggggctgggtcagtattaaatatgtgaggccatataaaggttcatcagatggagagacg
ctgaagggaggcatgttttacagcacaaagcctgaaattaaaagagcaatggtgctagca
gatgatgcaatgagtaaagataaaacaaagcggcttcaactggcagtgtgcaatgaacct
tctgacacggaggaggaagaggaggaagaaatggaggtgaatgaaagtggatcaggcaac
agtgatgacgacaatagtgaggaggacgtgaagagtaacaagcgagccatgagccgggag
agttctgtaaaagccaaaagaagaagagtgttggattccgacagtgaacgcgatggctcc
gatgtagagttccagcctgacgccaaagaagcggccagcagcgaggaagccagcagtggg
gtggacgagaacgaatctgctgacgcagagtcggacgcggagagcgttgcagagagtccc
atcaaagtcccttctaaacgcaagagaagagacgcaaacaagcctgctaaaaggagtagc
ctagaaaatgcgcattctgaaactcccaagagagcagcaacggtttctttggaagccaag
tccaagctgacatcgttcgcagcacccgagagttttgaatctcaagcgaacgcgtgcagc
ggaggcaccggtggcttcgcagtgtgggaacacgagaagcttgactggctgcaggaaggg
aagaggaaggacgcacacaggaagcagcagggcgaccccgattacgacccgtgtactctc
tacgtacccgagggctatctcaacaagtgtacgccgggaatgcggaggtggtggcagctg
aaaagtcagaacttcgatgctgtgattttctacaaagtgggaaagttctacgagttgtac
cacatggatgcggtcactggcgtgaacgagttgggcctgatcttcatgaaaggaacttgg
gcccattcaggttttccagaaactgccttcggcagattctccgatgttctggtgcagaag
ggctacaaggtagcccgcgttgagcaaacggagactcccgaaatgatggaaacgcgctgc
aagtcctcggcccacccaacaaaatttgacagggttgtacgccgagaaatatgccgaatc
atcaccaaaggcactcagacttacagcgtcctggactgtgatccctccgagaaccacagc
aaatacctcctgtgcgttaaggaaaaggaagactcctctggacaacgtgtttatggggtc
tgctttgtggacacgtcggtggggaagttttacgtggggcagttcgcggatgaccggcac
tgctcgaggtttaggacgttagtagcgcactacacacccgtgcaggtgctgtacgagaag
gggaacctcactgtggacacgcagaagatactgaagggctcgcttgtgtcctgcattcag
gaagggctgatctccggttcccagttctggaacgcatctaaaacactaaaagtcctcctc
gaagaaggatatttcaaggagaaacagaactctgatgatggatgctccttgccctctgta
atcaagtctctgacttcggagagtgactcgctgggattaacccctggtgaaaacggtgaa
ttggccctgtcagctcttggggggtgtgtcttctatctcaaaaggtgtctgattgatcag
gagctgttatcgctggcaaactttgaggagtatgtccctgtggatgttgatactgcaaaa
acaaagagttccagtagtttctttgccagaactgaccagcggatggtgctggacggagtc
accctgatgaacttggaagtcctgcagaacggaaccaacggaacaacagaaggtactctg
ttggagaggattgattcttgttgtacgccgttcgggaagcggctcctcaaacagtggctc
tgcgccccgctttgtaatcctaaatccatcaatgaccgtctggacgctgttgaggacctt
ctggcggtgccggataaaacgaccgaagttagtgagcacctgaagaagcttcccgacctc
gaaaggctgctcagcaaaattcacagcatcggatcgccgctgaaaagccagaaccaccct
gacagcagggccatcttctacgaggaagtcaagtacagcaaaaagaagatcgctgacttt
ttgtctgccctggaggggtttaaagtaatgaatgaaatcgtcgatgtcatggaagaaatt
gccagtgacttcaaatctaaagtcctcaggcagctactcactcgcaaagccaaaaatcca
gacggccgcttcccggacttgagtgcggagctgagacggtgggatactgcttttgatcat
aaccaggctcgaaagacaggagtgatcactccaaaggcaggttttgaccccgattatgat
aaagcgctacaggacattaaggctgttgaggaagatcttcacaaatacctggataagcag
cgcaaactgctcggattcaaatccgtgctctactggggggcgggcaaaaacaggtaccaa
atggaaattccggaaagcgtnnnnnnnnnnnncgaggagtatgagctgaagtcgagcagg
aaggggtataagcgctactggaccaaggagatcgagcggatgctggctgccatggtgagc
gccgaggagcgcagagatgcggcgctcaaagactgcatgaggcgcctcttctacaacttc
ggtaggaacagcagggactggcagacggccgtggagtgcatcgctgtgctggatgtcctg
atgtcccttgctacctacagtaaggatggggacggaccgctgtgccgacctgtaatcctc
ctgcctgcggagagcgcccctcccttcctggaactgaaaaactcgcgccacccctgcatc
acaaaaactttctttggggatgattttattcctaatgacattgtgataggcagcaaagac
gaagagagcagcagcgaagcttcctgtgtgttagtaactggcccaaatatgggtggcaaa
tccacgctcatgagacaggctggtctcctggttgtcatggcccagctgggatgctacgta
ccggctgaagtctgcaggctgacgcccatcgacagggtgttcacccggctcggcgcctcg
gacaggatcatgtcgggtgaaagtaccttctttgttgaattgagtgagacttccagcatt
ctccagcatgcaacagtgcactccctcgttcttgtggatgagctgggccgaggcacagct
acttttgacggcacggccatcgcgagcgccgtggtgaaggagctggcggagaagatcaag
tgccggacgctgttctccacgcactaccactcgctggtggaggactatgcgcgc
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