Escherichia coli O18 K1 H7 IHE3034 (ExPEC): ECOK1_3027
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Entry
ECOK1_3027 CDS
T01997
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase (NAD(P)(+))
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
eih
Escherichia coli O18:K1:H7 IHE3034 (ExPEC)
Pathway
eih00250
Alanine, aspartate and glutamate metabolism
eih00310
Lysine degradation
eih00350
Tyrosine metabolism
eih00650
Butanoate metabolism
eih00760
Nicotinate and nicotinamide metabolism
eih01100
Metabolic pathways
eih01120
Microbial metabolism in diverse environments
Module
eih_M00027
GABA (gamma-Aminobutyrate) shunt
eih_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
eih00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
ECOK1_3027 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
ECOK1_3027 (gabD)
00310 Lysine degradation
ECOK1_3027 (gabD)
00350 Tyrosine metabolism
ECOK1_3027 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
ECOK1_3027 (gabD)
Enzymes [BR:
eih01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
ECOK1_3027 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
ECOK1_3027 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
ECOK1_3027 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
ADE88764
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All DBs
Position
3099645..3101093
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AA seq
482 aa
AA seq
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MKLNDSNLFRQQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRA
LPVWRALTAKERANILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFA
EEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLK
PASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQ
LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQNG
VYDRFAEKLQQAVSKLHIGNGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKA
HERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYA
RDLSRVFRVGEALEYGIIGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI
GL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttaacgacagtaacttattccgccagcaggcgttgattaacggggaatggctg
gacgccaacaatggcgaggtcatcgacgtcaccaatccggcgaacggcgacaagctgggt
agcgtgccgaaaatgggcgctgatgaaacccgcgccgctatcgacgccgccaaccgcgcc
ctgcccgtctggcgtgcgctcactgccaaagaacgcgccaacattctgcgcaactggttc
aatttaatgatggagcatcaggacgatttagcgcgcctgatgaccctcgaacagggcaaa
ccactggctgaagcgaaaggcgaaatcagctacgccgcctcatttattgagtggtttgca
gaagaaggcaaacgtatttatggcgacaccattcccggtcatcaggccgataaacgcctg
attgttatcaagcagccgattggcgtcaccgcggctatcacgccgtggaacttcccggcg
gcgatgattacccgtaaagccggtccggcgctggcggcaggctgcacgatggtgctgaag
cccgccagtcagacgccgttctctgcgctggcgctggcagaactggcgattcgcgcgggc
gttccggctggcgtgtttaacgtagtcaccggttcggcgggcgcggtcggtaacgaactg
accagcaacccgctggtgcgcaagctgtcgtttaccggctcgaccgaaattggccgtcag
ttaatggaacagtgcgcgaaagacatcaaaaaagtgtcgctggagctgggcggcaacgca
ccgtttattgtctttgacgatgccgatctcgataaagccgtggaaggcgcgctggcctcg
aaattccgtaacgccgggcaaacctgcgtctgcgccaaccgcctgtatgtgcagaacggc
gtgtatgaccgctttgccgaaaaattgcagcaggcggtgagcaaactgcacatcggcaac
gggctggagaaaggcgtcaccatcgggccgctgatcgatgaaaaagcggtagcaaaagtg
gaagagcatattgccgatgcgctggagaaaggcgcgcgcgtggtttgcggcggtaaagca
catgaacgcggcggtaacttcttccagccgaccattctggtggacgttccggctaacgcc
aaagtgtcgaaagaagagacgtttggccccctcgccccgctgttccgttttaaagatgaa
gccgatgtgattgcgcaagccaatgacaccgaatttggccttgcagcctatttctacgcc
cgtgatttaagccgcgtcttccgcgtgggcgaagcactggagtacggcatcatcggcatc
aacaccggcattatttccaatgaagtggccccgtttggcggcattaaagcctcgggtctg
ggtcgtgaaggttcgaagtatggcatcgaagattacttagaaatcaaatatatgtgcatc
ggtctttaa
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