Entamoeba invadens: EIN_491850
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Entry
EIN_491850 CDS
T04133
Name
(RefSeq) DNA-directed RNA polymerase subunit D, putative
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
eiv
Entamoeba invadens
Pathway
eiv03020
RNA polymerase
eiv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
eiv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EIN_491850
09124 Replication and repair
03420 Nucleotide excision repair
EIN_491850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eiv03021
]
EIN_491850
03400 DNA repair and recombination proteins [BR:
eiv03400
]
EIN_491850
Transcription machinery [BR:
eiv03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
EIN_491850
DNA repair and recombination proteins [BR:
eiv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
EIN_491850
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Fer4_7
Fer4_9
Motif
Other DBs
NCBI-GeneID:
14887954
NCBI-ProteinID:
XP_004255747
UniProt:
A0A0A1U7F8
LinkDB
All DBs
Position
Unknown
AA seq
280 aa
AA seq
DB search
MEVEDKVQITGIETHGEKLSFRIYNTDTSFVNGLRRMIMAEVPTIAIQLVRVHLNTSYLC
DEYIAHRLGLIPLDSTKVYDFEDGDQTIFNIRVVNENERESLNVTSNDLQFVEGKKLFPV
GYKSDNPIIITQLGPRQSLYVDCFATKGTGKFHAKWNPTCQCVFQTLADIQINETKLANL
TGEQRRTFCEMCPQKVFEFQEINGRITVDHPESCIFCQECTVYSKDIGQRNFCTVTPKTD
EFIFKVEGTGVYPAKSVVSYGFGEMINKFSYLKSELGKFK
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggaagtagaggacaaagtacaaatcacaggcattgagacccatggcgagaaattgtca
tttagaatttacaacacagacacttcttttgtgaatggtcttcgtcgaatgataatggct
gaagtacctaccattgccattcaacttgttcgtgtccacttaaacacatcatatctctgt
gatgagtacatcgctcatagacttggcctcattccgctcgactcgactaaggtctacgat
ttcgaggatggcgaccaaacgattttcaatatccgagtggtcaacgagaatgagagagag
tcgctgaatgtcacatcgaacgacctccagtttgtcgaagggaagaaattgtttcctgtt
ggatacaaatcggataacccaattattatcacacaacttggcccacgtcagtcgttgtat
gttgactgcttcgcgacaaaggggacggggaaattccacgcgaagtggaacccgacgtgt
cagtgtgtatttcagacgcttgccgacatccaaatcaacgaaactaaactcgcgaattta
acaggggaacagagaagaacgttttgcgagatgtgcccacaaaaggtctttgagttccaa
gagatcaatgggaggataactgtcgatcatcctgagagttgtatattttgtcaagagtgt
acagtctattcgaaggatattggacaaagaaacttttgtacagtaactccgaaaacagat
gaatttatttttaaagtagaaggcactggggtgtatcctgcaaagtctgtcgtatcttat
gggtttggggagatgattaacaaattcagttacttaaagagtgaacttgggaagttcaag
tga
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