Eumetopias jubatus (Steller sea lion): 114223476
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Entry
114223476 CDS
T07240
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
eju
Eumetopias jubatus (Steller sea lion)
Pathway
eju03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
eju00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
114223476 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eju03021
]
114223476 (POLR1A)
Enzymes [BR:
eju01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
114223476 (POLR1A)
Transcription machinery [BR:
eju03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
114223476 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
Motif
Other DBs
NCBI-GeneID:
114223476
NCBI-ProteinID:
XP_027978222
LinkDB
All DBs
Position
Unknown
AA seq
1717 aa
AA seq
DB search
MLGSKNMPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSVNGLYDLALGPADS
KEVCSTCVQDFNNCSGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVIHLL
VCQLRVLEVGALQAVYELERILNRFLEENADPTAFEIQEELEQYTAKIVQNNLLGSHGAH
VKNVCESRSKLIAYFWKAHMTAKRCPHCKTGRSVVRKEHNSKLTVTYPAMVHKKADQKDT
EPLGIEEAQMGKRGYLTPTSAQEHLTALWKNEGFFLNYLFSGLENVDMESRFNPSMFFLD
FLVVPPSRYRPVNRLGDQMFTNGQTVNLQAVMKDMVLIRKLLALMAQEQELPCEVAAPAK
DEEKDSSVVLDRSFLSMLPGQSLTDKLYNIWIRLQSHVNIVFDSEMDKLMMEKYPGIRQI
LEKKDGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQEL
RQAVINGPNVHPGASMVINEDGSRTALSAVDLTQREAVAKQLLTPATGAPKPQGTKIVCR
HVKNGDILLLNRQPTLHRPSIQAHHARILPEEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEARVLACTDQQYLVPKDGQPLAGLIQDHMVSGANMTIRGCFFTREQYMELLYRG
LTDKVGRVKLFPPAILKPLPLWTGKQVVSTLLINIIPEDHIPLSLSGKAKINGKAWVQES
PRPVPGFNPDSMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGKVLTC
LARLFTAYLQLYRGFTLGVEDILVKPKADVKRHRVIEESARCGPRAVRAALNLPEAASCD
EVRGKWQDAHLGKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPENNLQMMVQS
GAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIK
PPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYG
EDGLDIPKTQFLQPKQFPFLASNYEVIMKSKHLHEVLSRADPQKALRHFRAIKKWQSKHS
HGLLRKGAFLNYSQRIQAAVKALNLEGGNQNGRSLGTHQILKMWGELDEQSRRKYQKKAA
PCPDPSLAVWRPDIYFASVSETFEKKMDDYSLEWASQAEKSYEKSELSLDRLRTLLQLKW
QRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIK
TPMMSVPVFNTKKALKRVKSLKKQLTRVCLGEVLEKIDVQESFCIGDKQDKFQVYQLRFQ
FLPHAYYQQEKCLRPEDILHFVETRFFKILMESLRKKNNKASAFRSVNTRRATQRDLDNS
GELERNRGEQEGDEEEGPIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEVEADNDDE
DMQEEELTPANGAHEAQEQDEEVGAGREEDSPPAAPLTQPRKSTRSREPQGAEAVERRVQ
AVRESHPFIEDYQYDSEESLWCQVTVKLPLMKINFDMSSLVVSLAQSAVVYATKGITRCL
LNETTTKKNEKELVLNTEGINLPELFKYTEVLDLRRLYSNDIHAMASTYGIEAALRVIEK
EIRDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQFLKQ
ATMLGSHDELRSPSACLVVGKVVRGGTGLFELKQPLR
NT seq
5154 nt
NT seq
+upstream
nt +downstream
nt
atgttgggctcaaagaacatgccctggcggaggctgcagggcatttccttcgggatgtat
tcggccgaagaactcaagaaattaagcgttaagtccattacaaaccctcgttacctggac
agcctggggaacccgtcggtgaacggcctgtacgatttagctttgggccctgcggattcc
aaagaggtgtgctccacctgcgtgcaggacttcaacaactgctctggccacctgggccac
attgagcttccgctcacggtgtacaaccctctcctctttgataaactctacctgctgctc
cggggctcctgtttaaactgtcacatgctgacctgcccccgggctgtgattcacctctta
gtctgccagctgcgagttctggaagtgggtgccctacaagcagtctacgagcttgagaga
attctgaacaggtttctagaagaaaatgctgatcctactgccttcgaaattcaggaagag
ttagaacagtacacggccaaaattgtacagaacaatctgttgggatcccacggtgcacac
gtgaaaaatgtttgtgagagcaggagcaaactcattgcttacttctggaaggcacatatg
acggccaagcggtgtccccactgcaagaccgggcggtcagttgtccgaaaggagcacaac
agcaagctgacagtcacgtacccagccatggttcacaagaaggctgaccagaaggacaca
gagcccctgggaattgaggaagctcagatgggaaaacgagggtacctaacacctaccagt
gcccaagaacatcttactgccctttggaagaatgaaggattctttctgaattaccttttt
tcgggactggaaaatgtcgacatggagtctagatttaatcccagtatgttctttttggat
ttcctggtggtgccaccctcaaggtatcgccctgtcaatcggctgggggaccagatgttt
accaatggccagacggtgaacttgcaggctgtcatgaaggacatggttctgatccgaaaa
cttctggcattgatggcccaggaacaggagctgccatgtgaggtggcagcacctgccaag
gatgaggaaaaagactcttcagttgttctagaccgatcctttttgagtatgcttccaggc
cagtccctcacagacaaactttacaacatttggattcgtcttcagagccatgtcaatatt
gtgtttgatagtgagatggacaaattaatgatggaaaagtaccctggcattagacagatc
ctggagaagaaggatggcttattccgaaaacacatgatgggcaagcgagtggactacgcg
gcccgttcggtcatctgcccagatatgtacattaacaccaacgaaattggaattcccatg
gtgtttgccacaaaactgacctaccctcagccagtcaccccctggaatgttcaggaactg
aggcaagcagtcatcaatggccccaatgtgcacccgggagcctccatggtcatcaatgag
gatggcagccgcacagccctgagtgccgtcgacctgacccagcgggaagctgtagccaaa
cagctcctgacaccagccacgggggcacctaagccccaggggacaaaaattgtgtgccgg
catgtgaagaatggggacatcctcctgctgaaccgacagcccaccctgcacagaccctct
atccaggcacaccatgcccgcatcctgcctgaagagaaagtcctgcggctccactatgcc
aactgcaaggcatataacgcggactttgatggagatgagatgaatgctcacttcccccag
agtgaacttggccgggccgaggcccgtgtcctggcctgcacagatcagcagtaccttgtt
cccaaggatggccaaccattggcagggttgatccaagatcatatggtttcgggtgcaaac
atgaccattcgaggttgctttttcactcgggagcaatatatggagctgctataccgagga
ctcacagacaaagtggggcgtgtgaagctctttcctcctgccatcctgaagcccttgcca
ctgtggacaggaaagcaggttgtgtcaacactgctcataaacataatcccagaggaccac
atcccactgagcttatcgggaaaggcgaagatcaacggcaaagcctgggtgcaggagtcc
cctcggcctgttcctggctttaaccctgactccatgtgcgagtcccaggtgatcatcaga
gaaggggagctgctctgtggggtgctggacaaggcgcactacgggagctccgcctatggc
ctggtccactgctgctatgagatctatggcggggagaccagcggcaaggttctcacctgc
ctggcccgcctcttcaccgcctacctgcagctctacagaggtttcaccttgggggtggaa
gacattctggttaagccaaaggcggatgtgaagagacaccgggtcatcgaagagtccgcc
cgctgcgggccacgggctgtcagggctgcgttaaacctgccagaagccgcttcatgtgat
gaggtccgaggcaaatggcaggatgcccatctgggcaaagaccagagggattttaacatg
attgatctgaagttcaaggaggaagtgaaccattacagcaatgagattaacaaggcatgc
atgccatttggcctgcacagacagttcccagaaaacaacttgcagatgatggtgcagtct
ggagccaaaggttcaactgtgaacaccatgcagatctcatgcctgctgggccaaatcgaa
ttggaaggtcggagaccacccttgatggcatctggcaagtcattgccctgctttgagcct
tatgagttcacccccagggccggtggtttcgtcactggcagattcctcactggcatcaag
cctcctgagttcttctttcactgcatggccgggcgagagggtctagtggacactgctgtg
aaaaccagccgctccggctatctccaaaggtgcatcatcaagcacttggagggactggtc
gtccagtatgacctgactgtccgcgacagtgatggcagcgtggtacagttcctgtacggg
gaggacggcctggacatccccaagacgcagttcctgcagcccaagcagttccccttcctt
gccagcaactacgaggtgataatgaaatcgaagcatctgcatgaagttttatccagagca
gatccccaaaaagctctccgtcacttcagagccatcaaaaaatggcaaagcaagcattcc
cacggcctgctgagaaaaggcgccttcttgaattattcacagagaattcaggcagctgtg
aaggccttgaaccttgagggtgggaaccagaatggccgcagccttgggactcaccagatc
ttgaagatgtggggtgagttagatgagcagagtcgaaggaaataccagaagaaggcagct
ccttgtcctgaccctagtctggctgtttggcgcccagacatctactttgcatcggtgtca
gaaacatttgaaaaaaagatggatgactacagtctcgagtgggcatctcaagcagagaag
agttacgagaaatcagagctttcccttgacaggttgaggaccctgctgcagctgaagtgg
cagcgctcactgtgtgacccgggtgaggccgtgggcctgctggccgcccagagcattggg
gagccctccacgcagatgaccctgaacaccttccactttgctggcagaggcgagatgaac
gtcaccctgggcatcccaagattgagggagattctcatggtggcgagtgccaacatcaag
acgcccatgatgagcgtgcccgtgttcaacaccaagaaagcactgaagagagtgaaaagc
ctgaagaagcaactcaccagagtatgcttaggggaggtgttggagaaaattgatgtccag
gagtcgttctgtatcggagacaaacaggacaagtttcaggtgtaccagttgaggtttcag
ttcctgccacatgcgtattaccagcaggagaagtgcctgagacctgaggacatcctgcac
tttgtggaaacaaggttctttaagattctgatggaatccctcagaaagaagaataataaa
gcctcagctttcagaagcgttaacactcggagagctacccagcgggatctagacaactct
ggggagttggagaggaatcggggagaacaggagggcgacgaggaagaggggcccattgtg
gacgctgaggccgaggagggggacgctgatgcttctgatgccaaacgcaaggagaaacaa
gaagaggaggtcgattatgagagcgaggaggaggaggtggaggcggataacgacgatgag
gacatgcaggaggaagagctcacccctgcgaacggtgctcacgaggcccaggagcaggat
gaagaggtgggcgcaggccgcgaggaggactcgccccctgccgcccccctcacccagccc
cggaagtccacccgcagcagagagccccagggagccgaggccgtggagcgccgggtgcag
gcggtgcgcgagtcgcacccgttcatagaggactaccagtatgactccgaggagagcctg
tggtgccaggtgacagtgaagctccctctgatgaagattaactttgacatgagctccctg
gtagtgtcgctggcccagagtgctgttgtctacgcgaccaagggcatcacaaggtgcctc
ctcaatgaaaccaccaccaagaagaatgagaaggagcttgtcttaaacactgaaggaatc
aacctgccggagctgttcaaatacactgaggttctggacttgcgccgcctctattccaat
gacattcacgccatggccagcacctacggcatcgaggccgcactgcgggtgatcgagaag
gagatcagggacgtgtttgctgtgtacggcattgcggtcgatccccgccatctctccctg
gtcgccgactatatgtgcttcgagggcgtgtacaagccgttgaatcgctttgggatccga
tcaaactcctcccctctgcaacagatgacatttgaaaccagcttccagtttctgaagcag
gccaccatgctgggatcgcacgatgagctgaggtccccttccgcctgcctcgtggtcggg
aaagtcgtcaggggcgggacaggcctgttcgagctcaagcagcccctgagatag
DBGET
integrated database retrieval system
