Escherichia coli KO11FL: KO11_04595
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Entry
KO11_04595 CDS
T02104
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
ekf
Escherichia coli KO11FL
Pathway
ekf00540
Lipopolysaccharide biosynthesis
ekf01100
Metabolic pathways
ekf01250
Biosynthesis of nucleotide sugars
Module
ekf_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ekf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
KO11_04595 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ekf01005
]
KO11_04595 (rfaD)
Enzymes [BR:
ekf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
KO11_04595 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
ekf01005
]
Core region
KO11_04595 (rfaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
AFH15905
LinkDB
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Position
complement(984007..984939)
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AA seq
310 aa
AA seq
DB search
MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLDIADYMDKEDFLIQI
MAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATY
GGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGS
MASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSGIFNLGTGRA
ESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVT
EYMAWLNRDA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgttaccggcggcgcgggctttatcggcagcaacatcgttaaggccctgaat
gataaaggcatcaccgatattctggtggtggacaacctgaaagacggcaccaagtttgtg
aacctggtggatctggatatcgcggactatatggataaggaagacttcctgatccagatt
atggctggcgaagagttcggcgatgtcgaagcgattttccacgaaggcgcatgctcttcc
accaccgagtgggatggcaagtatatgatggataacaactatcaatactccaaggagctg
ctgcactactgcctggagcgtgaaattccgttcctgtatgcctcttccgcagccacctac
ggcggacgcacctccgactttattgaatcccgcgaatacgaaaagccgctgaacgtctac
ggttactcgaaattcctgtttgatgaatatgttcgtcaaatcctgcctgaagcgaactcg
cagattgttggcttccgctatttcaacgtttatggaccgcgtgaaggccataaaggcagc
atggcgagcgtcgctttccatctcaacactcagcttaacaacggtgaatcaccgaagctg
tttgaaggtagcgagaacttcaaacgtgacttcgtctatgtgggcgacgtggcagatgta
aacctgtggttcctggaaaatggcgtttccggcatcttcaacctcggtactggtcgtgcg
gaatccttccaggccgtagcagatgctactctggcttatcacaagaaaggccagatcgaa
tacattccgttcccggataagctgaaaggccgctaccaggcgttcactcaggcagatctg
acaaatctgcgcgcggcgggttacgacaaaccgttcaaaaccgttgctgaaggtgtaacg
gaatacatggcctggctgaatcgcgacgcataa
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