KEGG   Eutypa lata: UCREL1_7499
Entry
UCREL1_7499       CDS       T03103                                 
Name
(GenBank) hypothetical protein
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
ela  Eutypa lata
Pathway
ela03020  RNA polymerase
ela03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ela00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    UCREL1_7499
  09124 Replication and repair
   03420 Nucleotide excision repair
    UCREL1_7499
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ela03021]
    UCREL1_7499
   03019 Messenger RNA biogenesis [BR:ela03019]
    UCREL1_7499
   03400 DNA repair and recombination proteins [BR:ela03400]
    UCREL1_7499
Transcription machinery [BR:ela03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     UCREL1_7499
Messenger RNA biogenesis [BR:ela03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     UCREL1_7499
DNA repair and recombination proteins [BR:ela03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      UCREL1_7499
SSDB
Motif
Pfam: SHS2_Rpb7-N S1
Other DBs
NCBI-ProteinID: EMR65523
UniProt: M7SMA0
LinkDB
Position
Unknown
AA seq 171 aa
MFFIMECERNVTLHPSYFGKNMHDLVTSKLLRDVEGTCTGSYYIITIMDSFTVSEGRILP
SSGLAEFTVNYRAVVWRPFKGETVDAVVTSVNQHGFFADAGPLRIFVSTHLIPSDIKWDP
NATPPQFTNNDDIVIEVTTHVRVKILGTRAEVGELWAIGSIKEDYLGTLQF
NT seq 516 nt   +upstreamnt  +downstreamnt
atgttcttcatcatggaatgcgaacgcaatgtcaccttgcatccttcctacttcggcaag
aatatgcacgacctggttaccagcaagttgctgcgggatgttgagggcacttgcactgga
agttactatataatcaccatcatggatagcttcaccgtctctgagggacgcatccttccc
agcagcggccttgccgaattcaccgtcaactatcgtgctgttgtatggaggccttttaag
ggtgaaacggttgatgccgttgtcacgtctgtcaaccaacacggtttctttgccgatgct
gggcctcttcgcatctttgtctctacgcacttgataccctcagatatcaaatgggacccc
aacgctacgccaccacagttcactaacaatgatgatattgtcatcgaagtcaccactcac
gtgcgagtcaagattttaggtacccgtgccgaggttggtgaactttgggctattggtagt
attaaggaggattatctcggaactctacagttctag

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