Elizabethkingia miricola: VO54_01130
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Entry
VO54_01130 CDS
T03757
Symbol
rafA
Name
(GenBank) Alpha-galactosidase
KO
K07407
alpha-galactosidase [EC:
3.2.1.22
]
Organism
elb
Elizabethkingia miricola
Pathway
elb00052
Galactose metabolism
elb00561
Glycerolipid metabolism
elb00600
Sphingolipid metabolism
elb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
elb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
VO54_01130 (rafA)
09103 Lipid metabolism
00561 Glycerolipid metabolism
VO54_01130 (rafA)
00600 Sphingolipid metabolism
VO54_01130 (rafA)
Enzymes [BR:
elb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.22 alpha-galactosidase
VO54_01130 (rafA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Melibiase
Glyco_hydro_36N
Glyco_hydro_36C
GHL10
DUF4838
GHL6
CDC73_C
Motif
Other DBs
NCBI-ProteinID:
AJW62612
LinkDB
All DBs
Position
1219888..1222065
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AA seq
725 aa
AA seq
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MRTLCSFIISCIFLCLGRLQAQDKTPTIVISTQNTALVYITNVKKQLTQLYFGQALANTS
DYTLKKPNNLPAIITQGSGPVREPSIGVLHADNNPSLELQYINHNTKTEGNIQTTQIQLK
DPQYPFYVTLNFKAYKNENVIEQWTEIKHQEKKAVTLKHFTSAFLQLSSKNYYLTHFFGD
WANEMRMEENLLPEGIHHIESKLGTRATNFDLPSFMLSVDQPAGEENGKVLAGTLAWSGN
FRLGFENIKYSEDFGNLLQVLPGINNYASDYTLMPNTTFTTPSFIYTYSYSGKGQASRNL
HQWATNYGIYKGKENKSTLLNNWEATYFKFDEQKLTSLLGDAQNLGVDVFLLDDGWFGNK
SPRNNDDAGLGDWEVNKKKLPNGLPFLVKEAKKHNVKFGIWVEPEMVNPKSELYEKHPDW
ILKLPNRDENLRRTQLVLDLSNPKVQEHVFKVVDNILQENPDIAYIKWDCNRYMTNAFSD
YLKDKQNNLYIDYTLGLYKVLERIRQKYPDTELMWCSGGGGRAEYGGLKYTNEFWPSDNT
DPLQRIFIQYGYSYFFPMGIQCAHVTSWGKQPLKFKLDVAMSGKLGFDIRIEEMNAEELK
LSQNALKNYKSLQDIINTGKMYRLIAPYNNHYAAWMLTDKAKNKAVLYTYNLHTQLGDYF
TPIQFQGLDPNKNYVLKELNLENESKPQLPQNGKSFSGDYLMKIGLPWFLNGSLKSSVIE
LTATN
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgagaacactctgttcattcattattagttgcatattcctctgtttagggaggttgcag
gctcaggacaaaacacctacgattgtaatttctacacagaatacagcattagtttacata
acaaatgtaaaaaagcaacttacgcagctttatttcggtcaggcactcgccaatacttcc
gattataccctaaaaaaaccaaacaacctaccggctattattactcagggttcagggccg
gttcgtgaaccttcgattggtgtacttcatgcagacaataatccatcactggaacttcag
tacattaatcacaataccaaaaccgaaggtaatattcagacgacacaaattcagcttaaa
gatcctcagtatccgttttatgttacgctaaattttaaagcctataaaaatgaaaatgtt
attgaacagtggacagaaattaaacaccaggagaaaaaggctgttacactgaagcacttt
acctcagcttttcttcagttatcttcaaaaaattactacctgacacattttttcggtgac
tgggccaatgaaatgcgcatggaagagaaccttttgcccgaaggaattcatcatatagaa
tctaagctgggaacacgggcaaccaatttcgatttaccttcttttatgctttccgtagat
cagccagctggtgaagagaacggaaaagttctggcaggaactcttgcctggagtggtaat
ttcagactgggtttcgaaaacatcaagtatagtgaagactttggcaatctgctacaggtt
ctacccggtatcaataattatgcttctgactataccctgatgccaaataccacttttaca
acaccctcttttatctatacttattcctattccggaaaaggacaggcttcccgaaatcta
caccaatgggctaccaattacgggatttataaaggcaaagagaataaatcgaccttactg
aacaactgggaagctacttattttaaattcgacgaacaaaagctaaccagccttctggga
gatgcacaaaatctgggagtggatgtatttcttttggatgatggctggtttggaaataaa
tctccgagaaacaatgatgatgccggacttggcgattgggaagtaaacaagaaaaaactt
ccgaatggacttccattccttgtgaaagaggctaaaaagcacaatgtgaaatttgggata
tgggtagaaccggaaatggtaaatcccaaaagtgagctttatgaaaaacatcccgactgg
attctgaaacttccaaacagagacgaaaatctaagaagaacccagctagtattggactta
tctaatcctaaagtacaggaacatgtttttaaagtagtagataatattctccaggagaac
cctgatattgcttacatcaaatgggattgtaaccgctatatgacaaatgcattttcagat
tatctgaaggataaacaaaataacctgtatatagattataccttgggactttataaagtt
ttggaacgcattcgtcagaaatacccggatacagagctaatgtggtgtagtggtggtggc
ggtcgtgcagaatatggcggattaaaatacactaatgaattttggccaagtgataatacc
gatcctttacaacggatctttatccagtacgggtattcttatttctttccaatgggaatc
caatgcgcccatgtaacgagttggggaaaacagcccctaaaattcaaactggatgttgct
atgagtggcaaattgggatttgatataagaattgaagagatgaatgcagaagaattaaag
ctgtcccaaaatgctctgaaaaattataaaagtctgcaggatataattaataccggtaag
atgtaccgactaatagctccttataacaatcattatgcagcatggatgctcactgataaa
gccaaaaataaagcagtactctatacatacaacctgcatactcaattaggtgattacttc
accccaatacaattccagggacttgatcctaataaaaattatgtattaaaagaattaaat
cttgaaaatgaaagtaagccacaactcccacaaaatggaaagtctttctcaggagattat
ttaatgaaaattgggcttccttggtttttgaatggcagtctgaaaagtagcgttatagaa
ctaactgcaacaaattaa
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