Escherichia coli clone D i14: i14_0206
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Entry
i14_0206 CDS
T02003
Symbol
ldcC
Name
(GenBank) lysine decarboxylase
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
elc
Escherichia coli clone D i14
Pathway
elc00310
Lysine degradation
elc01100
Metabolic pathways
elc01110
Biosynthesis of secondary metabolites
elc01120
Microbial metabolism in diverse environments
Module
elc_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
elc00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
i14_0206 (ldcC)
Enzymes [BR:
elc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
i14_0206 (ldcC)
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AER87723
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Position
215568..217709
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AA seq
713 aa
AA seq
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MNIIAIMGPHGVFYKDEPIKELESALVAQGFQIIWPQNSVDLLKFIEHNPRICGVIFDWD
EYSLDLCSDINQLNEYLPLYAFINTHSTMDVSVQDMRMALWFFEYALGQAEDIAIRMRQY
TNEYLDNITPPFTKALFTYVKERKYTFCTPGHMGGTAYQKSPVGCLFYDFFGGNTLKADV
SISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAAPSGSTLLI
DRNCHKSLAHLLMMNDVVPVWLKPTRNALGILGGIPRGEFTRDSIEEKVAATTQAQWPVH
AVITNSTYDGLLYNTDWIKQTLDVPSIHFDSAWVPYTHFHPIYQGKSGMSGERVAGKVIF
ETQSTHKMLAALSQASLIHIKGEYDEEAFNEAFMMHTTTSPSYPIVASVETAAAMLRGNP
GKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPPQVDEAECWPVAPGEQWHGFSDAD
ANHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTGPYNLLFLFSIG
IDKTKAMGLLRGLTEFKRSYDLNLRIKNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIRKH
DLPGLMLRAFDTLPEMIMTPHQAWQRQIKGEVETIALEQLVGRVSANMILPYPPGVPLLM
PGEMLTEESRTVLDFLLMLCSVGQHYPGFETDIHGAKQDEDGVYRVRVLKMAG
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcattgccattatgggaccgcatggcgtcttttataaagatgagcccatcaaa
gaactggagtcggcgctggtggcgcaaggctttcagattatctggccacaaaacagcgtt
gatttgctgaagtttatcgaacataacccacgaatttgcggcgtgatttttgactgggat
gagtacagtctcgatttatgtagcgatatcaatcaacttaatgaatatctcccgctttat
gccttcatcaacacccactcgacgatggatgtcagcgtgcaggatatgcggatggcgctc
tggttttttgaatatgcgctggggcaggcggaagatatcgccattcgtatgcgtcagtac
accaacgaatatcttgataacattacgccgccgttcacgaaagccttgtttacctacgtc
aaagagcggaagtacaccttttgtacgccggggcatatgggcggcaccgcatatcaaaaa
agcccggttggctgtctgttttatgattttttcggcgggaataccctcaaggcggacgtc
tctatttcggtcaccgagcttggttcgttgctcgaccacaccgggccacacctggaagcg
gaagagtacatcgcgcggacgtttggcgcggaacagagttatatcgttaccaacggaaca
tcgacgtcgaacaaaattgtgggtatgtacgccgcgccatccggcagtacgctgttgatc
gaccgcaattgtcataaatcgctggcgcatctgttgatgatgaacgatgtagtgccagtc
tggctgaaaccgacgcgtaatgcgttggggattctgggtgggatcccgcgcggtgaattt
actcgcgacagcatcgaagagaaagtcgctgccaccacgcaggcacaatggccggttcat
gcggtgatcaccaactccacctatgatggcttgctctacaacaccgactggatcaaacag
acgctggatgtcccgtcgattcacttcgattctgcctgggtgccgtacacccattttcat
ccaatctaccagggtaaaagtggtatgagcggcgagcgtgttgcaggaaaagtgatcttc
gaaacgcagtcgacccacaaaatgctggcggcgttatcgcaggcgtcgctgatccacatt
aaaggtgagtatgacgaagaggcgtttaacgaagcctttatgatgcataccaccacctcg
cccagttatcccattgttgcttctgttgagacggcggcggcgatgttgcgtggtaatccg
ggcaaacggctgattaaccgttcagtagaacgagctctgcattttcgcaaagaggtccag
cggctgcgggaagagtctgacggctggtttttcgatatctggcaaccgccgcaggtggat
gaagccgaatgctggcccgttgcgcctggcgaacagtggcacggctttagcgatgcggat
gccaatcacatgtttctcgatccggttaaagtcactattttgacaccggggatggacgag
cagggcaatatgagcgaggaggggatcccggcggcgctggtggcaaaattcctcgacgaa
cgtgggatcgtagtagagaaaaccggcccttataacctgctgtttctctttagtattggc
atcgataaaaccaaagcaatgggattattgcgtgggttgacggaatttaagcgctcttac
gatctcaacctgcggatcaaaaatatgctgcccgatctctatgcagaagatcccgatttc
taccgcaatatgcgtattcaggatctggcgcaagggatccataagctgattcgtaaacac
gatcttcccggtttgatgttgcgggcatttgataccttgccggagatgatcatgacgcca
catcaggcatggcagagacagattaaaggcgaagtagaaaccattgcgctggaacaactg
gtcggtagagtatcggcaaatatgatcctgccttatccacccggcgtaccgctgctgatg
ccgggagaaatgcttaccgaagagagccgcacggtactcgattttctactgatgctttgt
tccgtagggcaacattaccccggttttgaaacggatattcacggcgcgaaacaggacgaa
gacggtgtttaccgcgtacgagtcctaaaaatggcaggataa
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