Escherichia coli O44 H18 042 (EAEC): EC042_1411
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Entry
EC042_1411 CDS
T02067
Name
(GenBank) putative signal transduction protein
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
elo
Escherichia coli O44:H18 042 (EAEC)
Pathway
elo02024
Quorum sensing
elo02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
elo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EC042_1411
02026 Biofilm formation - Escherichia coli
EC042_1411
Enzymes [BR:
elo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
EC042_1411
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
GGDEF_2
PAS_10
Motif
Other DBs
NCBI-ProteinID:
CBG34234
UniProt:
D3H3J0
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All DBs
Position
complement(1480367..1482352)
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AA seq
661 aa
AA seq
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MKTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPERTLQLSAEQAARIREMTVI
TSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAVARDLSHGLSFAEQVVSEA
HSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLFMSRREAAASRRNNRVFFRSG
NAYEVELWIPTRKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRILANTD
SITGLPNRNAMQELIDHAINQADNNKVGVVYLDLDNFKKVNDAYGHLFGDQLLRDVSLAI
LSCLEHDQVLARPGGDEFLVLASNTSQSALEAMASRILTRLRLPFRIGLIEVYTSCSVGI
SLSPEHGSDSAAIIRHADTAMYTAKEGGRGQFCVFTPEMNQRVFEYLWLDTNLRKALEND
QLVIHYQPKITWRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVILDVV
RQVAKWRDKGINLRVAVNISARQLADQTIFTALKQVLQELNFEYCPIDVELTESCLIEND
ELALSVIQQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLV
RAIVAVAQALNLQVIAEGVESKKEDAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKR
A
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccgttagggagtccacaacgttgtacaactttctcggatcgcacaatccatac
tggcggttaacggaaagcagcgatgttttgcgcttttctaccaccgaaaccacagaacct
gaacgtacgttgcagttatctgccgaacaggctgctcgcatcagggaaatgacagtcatc
acttccagtctgatgatgagtctgaccgtcgatgaaagcgatctttctgtgcatctggta
ggacgaaaaatcaataaacgggaatgggctggcaacgcgtcggcatggcatgacacaccg
gcggttgctcgtgatttatcacacgggctttcctttgctgagcaggtagtttctgaagca
cattccgcaatagtgattctcgacagtcgggggaatatccagcgcttcaatcggttatgt
gaagattacacagggttgaaagaacacgacgtcattgggcaaagcgtgtttaaactgttt
atgagccgtcgtgaagctgcggcatccaggcgcaataaccgtgtattttttcgaagcggc
aatgcatatgaagtcgaactgtggataccaacacgtaaaggccagcggctgtttctgttt
cgcaataaatttgtccacagcggcagtggcaaaaacgagatttttttaatctgttccggc
accgacattaccgaagagcgccgcgctcaggagcgactgcgcattctggcaaataccgac
agtatcaccggactgccgaatcgtaacgcaatgcaggagttaatcgatcacgctattaat
caggcagataacaataaagttggggttgtgtatcttgatttggataattttaaaaaggtc
aacgacgcctatgggcatttgtttggtgaccagctattacgcgacgtgtcattggccatt
ttaagctgtctcgaacatgatcaggtgttggcgcgtccaggtggcgatgagtttctggta
ctggcatccaatacctcacaaagcgcgctggaagcaatggcatcacgaattttgacccgc
ttacgactccccttccgcattggtttaattgaagtttataccagctgttcagtgggtatt
tcactctctcccgaacatggttcggacagcgcggctattattcgtcacgccgacacagca
atgtacacagcgaaggaaggcggacgaggacaattttgcgtttttactccagaaatgaat
cagcgggtatttgaatatctctggctggataccaacttgcgtaaagcactggaaaacgat
cagttggttattcactatcaaccgaaaatcacctggcgtggcgaagtgcgcagtctggaa
gcactagtacgttggcagtcacctgaacgtgggttgattccaccgttggacttcatttcc
tacgccgaagagtcagggctaattgtgcctttaggccgttgggtgattctcgatgtcgta
cgccaggtggcaaagtggcgggataaaggtattaacctgcgagtggcggtaaacatttct
gcacgtcagctcgccgatcaaaccattttcaccgccctgaaacaggttctccaggaactc
aattttgaatactgccctattgatgttgaactgacggagagctgcctgattgagaatgat
gaactggcactttctgttattcaacaatttagccaactaggtgcgcaagtgcatctggac
gattttggtaccggctactcttcactttcgcaactggcgcgctttccgatcgatgcgatt
aaacttgaccaggtttttgttcgagatattcacaaacaacctgtatcgcagtcgctggtc
cgggcgatcgtcgctgtggcccaggcattgaatcttcaggtgatcgctgaaggagtggag
agtaaaaaggaagatgcttttttaaccaagaacgggatcaatgagcggcaaggatttttg
tttgccaaaccgatgcccgccgtcgccttcgaacgttggtataaacgctatctgaagcgc
gcataa
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