KEGG   Escherichia coli P12b: P12B_c0426
Entry
P12B_c0426        CDS       T02030                                 
Symbol
ribD
Name
(GenBank) Riboflavin biosynthesis protein ribD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
elp  Escherichia coli P12b
Pathway
elp00740  Riboflavin metabolism
elp01100  Metabolic pathways
elp01110  Biosynthesis of secondary metabolites
elp01240  Biosynthesis of cofactors
elp02024  Quorum sensing
Module
elp_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:elp00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    P12B_c0426 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    P12B_c0426 (ribD)
Enzymes [BR:elp01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     P12B_c0426 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     P12B_c0426 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: AFG39308
LinkDB
Position
453603..454688
AA seq 361 aa
MARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQRAGEPHAEVHALRMAGEKAKGA
TAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQQAGIDVSHGL
MMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQLLRAQ
SHAILTSSATVLADDPALTVRWSELDEQTQALYPQQNLRQPIRIVIDSQNRVTPVHRIVQ
QPGETWFARTQEDSREWPETVRTLLIPEHKGHLDLVVLMMQLGKQQINSIWVEAGPTLAG
ALLQAGLVDELIVYIAPKLLGSDARGLCTLPGLEKLADAPQFKFKEIRHVGPDVCLHLVG
A
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggcgcgggcgctaaagctggcgcaacgaggacgttttaccacgcatcccaacccgaat
gtcgggtgcgtcattgtcaaagatggcgaaattgtcggtgaaggttaccaccaacgtgcg
ggtgaaccacatgccgaagtacacgcgttgcgtatggcgggtgaaaaagccaaaggtgcg
accgcctatgtcacactcgaaccctgtagccatcatggtcgtacgccaccgtgctgtgac
gcactcatcgccgctggcgtagcgcgcgtggttgcctcgatgcaagatcctaacccgcag
gtcgctgggcgtggactttaccgtctgcaacaggctggcattgacgtcagccacggcctg
atgatgagtgaagccgagcaattgaataaaggctttctcaagcggatgcgcaccggcttt
ccttatattcagttaaaacttggcgcatcgcttgatggtcgcacggcgatggcgagcggc
gaaagccagtggatcacttcgccccaggcgcggcgtgatgtacaactactgcgcgcgcaa
agtcatgccattttaaccagcagcgccacggtgctggcggatgatcctgccttaacggtg
cgttggtctgaactggatgaacaaactcaggcgctctatccgcaacaaaatctccgtcag
ccgatacgtattgtgattgatagccaaaatcgcgtgacgccggtacatcgcattgtgcag
cagcccggcgaaacctggttcgcgcgtacgcaggaagattctcgtgagtggccggaaacg
gtgcgtaccttgctgattccagagcataaaggtcatctggatctggttgtactgatgatg
caactgggtaaacagcaaattaacagcatctgggtggaagcggggccaacgctcgctggc
gcattgctgcaggcgggtttagtcgatgagctgattgtctatatcgcacctaaactatta
ggcagcgacgcccgcggattatgcacgctgccagggcttgagaaattagccgacgccccc
caatttaaattcaaagagatacgtcatgtaggcccggatgtttgcctgcatttagtgggt
gcatga

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