Esox lucius (northern pike): 105008290
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Entry
105008290 CDS
T04894
Symbol
cacna1h
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
els
Esox lucius (northern pike)
Pathway
els04010
MAPK signaling pathway
els04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
els00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
105008290 (cacna1h)
04020 Calcium signaling pathway
105008290 (cacna1h)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
els04040
]
105008290 (cacna1h)
Ion channels [BR:
els04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
105008290 (cacna1h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
105008290
NCBI-ProteinID:
XP_028979031
LinkDB
All DBs
Position
LG11:3700250..3839894
Genome browser
AA seq
2409 aa
AA seq
DB search
MTDGDGRVRFHYAPPLTPSLTVTPQEELQKGDERQRYDGEVRFPGPTFHQGHATHPSLCR
QDHNPSSRPHAGFPVDEDGVAEEGGSNTWSPRPEGGGAGGAPGVPGAGPGGGGVSGNMRG
DTVTDPGDLVSEEEEQQPYPSLEPVVFFCAKQTTRPRSWCLRMVCNPWFEHVSMLVILLN
CVTLGMFQPCEDVTCQTEWCLILQVFDDCIFAFFAVEMVIKMVALGVFGSKCYLGDTWNR
LDFFIVMAGMMEYSLDGHNASLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNV
LLLCFFVFFIFGIVGVQLWAGLLRNRCFMGEDFRTLYNLSLSAYYQPEEGEDDPFICSAI
RENGMLRCHDVPPFSKGQVECSLAAPPPGQFLLTGEDRTGVGCVNWNQYYNVCRPGNVNP
HKGSVNFDNIAYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLC
LVVIATQFAETKQRENALMREQRARYMSNDSTLASYSEPGSCYEEMLRYISHLYRKLTRR
VQRMYTTWHSKRRKKVNPNGGGPGLGGGNGHGSHSIRSTSGNAPWLRPIHTLLQHHQHHH
GQLSNGGHIPLATGEEDLEMRSLPVPAREPLVNPEVSPLGRLNGGMNYPTILPSLIRSST
QTHPHRPHHTSSSVLSPLPPSPLRKLHHLMGQQSRPRLLDQLADLVPSALLLELLTCPLC
ANALGKLQLDMGGPESSRGEADTLHNFPQGEEGRGGRGRRRGRCGSGLALALKRCQDRLA
EMWGGFGDRLRRIVDSKYFNRGIMIAILINTLSMGIEYHQQPEELTDILEISNIVFTSMF
VLEMMFKLLAFGMFGYIKNPYNIFDGIIVIISVWEVIGQADGGLSVLRTFRLLRVLKLVR
FMPALRRQLVVLMKTMDNVATFCMLLMLFIFTFSILGMHLFGCKFSLQTENGDTIPDRKN
FDSLLWATVTVFQILTQEDWNVVLYNGMASTTPLAALYFVALMTFGNYVLFNLLVAILVE
GFQAEGDANRSDSDDEKRSDNFEEEEKIGELRDTELKMYSLMMTANGHVDRNSLAPPIIM
RTAATPMPTPKSSLGPESILGEGLMYGEAGLGYSEAGIGCMDSRRGSNASIDPSVSDRRS
LSSPGRRSPLPSRCQGSVSGWGSRRSSWNSLSRAPSLKRRDTSGERESLLSGEGGGEEEE
EAEAAGGGRSRLYPRPGSLELLQASSLCPSATGEYEDCNGRSLHHITYDPTVNLDPNKDQ
LSPEDDLEDDNPWVRLKKVLESRQPLWCREHEELTLYLFSPQNSFRIWCKGMISHKLFDH
VVLVFIFLNCITIALERPNIQLHSIERVFLSVSNYVFTVIFLAEMTVKVVALGFCLGQQS
YLKSSWNVLDGILVLVSLVDILVSLASTGGNRILGILRVLRLLRTLRPLRVISRAPGLKL
VVETLITSLRPIGNIVLICCAFFIVFGILGVQLFKGKFYVCEGPDTKNITNRSDCLLANY
QWRRRKYNFDNLGQALMSLFVLSCKDGWVNIMYDGLDAVGVDQQPMRNHNPWMLLYFISF
LLIVSFFVLNMFVGVVVENFHKCRQDQEEEEQRLREEKRLKILEKKRRSKEKDGAEAQRR
PYYADYSPIRLSIHTLCTSNYLDLFITIIIGINVVTMSMEHYDQPQYLEDTLKYFNYVFT
CIFIIEALLKLMAFGLHRFFKDRWNQLDVAIVLLSIMGITLEELKMNASLPINPTIIRIM
RVLRIARVLKLLKMAKGMRALLDTVMQALPQVGNLGLLFMLLFFIYAALGVELFGKLECN
DSNPCEGLNRHATFENFGMAFLTLFRISTGDNWNGIMKDTLRECRPEDRSCLTYLPLVSP
LYFVTFVLMAQFVLVNVVVAVLMKHLEESNKEAKEEAEMDAEIELEMERARRLSSASNAS
SLVTAYAGPRPHSPGQEEEGQCSHEEELLSPKKMSVSRMHSLPNDSYMFRPVRPASAPYT
LQEEHTSPLGHSSGSVTSVRSQPCENRSLLQVPSLSPPPSSGSTLPRIAPPRPSPSPRAM
RRQVAVKVVSVEVQCLHTRDSLEKQDPLSVPPPQPLALLPSHPSSPPTNSDPADEEVCHI
TCSARHWWEGHGSGRSHSLSPYASPVSPPSPYPRSRGSALNLRVAGLKGQDSGKVFGVDS
QCSLDKPCFPDDLRRHSVEIFLPPPGDPLLEYVGEVTGGGRRPGGQGSEGKVHRKKKMSP
PCISIHPPCEPPGHALSEPTVECSTMLRRRTPSSELTDTHTPSHTHARHHTPTDTQTRHH
TQINTHTQTRHHTPITAHTPMQTLPQSVTHSLPHAHTLIHTRTQPYLHTHTLSHTHTLSY
RHSPPLTSETRHHSLCANYLPLPQFTFDPTEPRHMSGRSPGLSDNDPASSPSHFDRGAGF
SSVNSRTAQ
NT seq
7230 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggcgatgggagagtccgcttccactacgccccccccctcacccccagcctt
actgtgaccccccaggaggagctgcagaagggggatgagaggcagcgctatgacggggag
gtgaggttcccaggaccgacgttccaccagggtcatgccacgcacccctccctgtgccgt
caggatcacaacccctccagccgcccccacgccggcttccctgtcgacgaggatggagtc
gcggaggagggaggcagtaacacctggagcccccggccagaaggtgggggtgccggaggg
gccccgggagttcctggtgccggtcccggtggtgggggtgtctccggtaacatgagaggt
gacacagtgacagacccgggagacctggtgtctgaagaggaagagcagcagccatacccg
agcctcgaaccggtcgtcttcttctgcgccaaacagaccacacggcctcggagctggtgt
ctacgcatggtctgtaacccatggtttgaacatgtctccatgctcgtcatcctgctgaac
tgtgtaaccttggggatgttccagccctgcgaggacgtcacctgtcagaccgagtggtgc
ctcatactacaggtgtttgatgactgtatatttgcgttcttcgcggtggagatggttatc
aagatggtggcccttggtgtctttggttctaaatgttaccttggcgacacctggaaccga
ttggacttcttcatcgtcatggcagggatgatggagtattctttagatgggcacaacgcc
agcctgtcagctatcagaactgtgcgtgtgctgcgacctctccgtgctatcaacagagtc
cctagtatgcgtatcctggtgactcttctcctggacactctgcccatgctggggaacgtc
ctgctactttgtttctttgtcttcttcatcttcggaatcgttggtgtgcagttgtgggca
gggctgctaaggaacaggtgcttcatgggagaagatttcagaacgctgtataacctgtca
ttaagtgcatactaccagcctgaggagggagaggatgaccccttcatctgctcagcaatc
cgagagaacggaatgctacgttgccatgatgtccctcccttcagcaagggacaggtggag
tgctcgctggccgcgccccctccgggtcagttcctgctgactggggaggacaggaccggc
gtcggctgtgtcaactggaaccagtactacaatgtctgtcggcctggcaacgtcaaccct
cacaaaggatcggtgaactttgacaacatcgcttacgcatggatagccatctttcaggtg
ataactctggagggttgggtggacatcatgtactatgtcatggatgctcactccttctac
aactttatatattttatactgctgatcatagtgggctcattcttcatgatcaacctgtgc
ctggttgtcatagccacccagtttgctgagactaaacagcgagagaacgcgctgatgcgg
gagcagcgggcacgctacatgtccaatgacagcacgctggccagctacagtgaacctggg
tcgtgctacgaggagatgctgagatacatttcacacctctaccgtaaactgaccagacgg
gtacagcgcatgtataccacctggcacagtaagcgccgtaagaaggtgaaccctaatgga
ggagggccgggtctggggggaggaaacggacatggaagccacagcatccgcagcacatct
ggaaacgccccctggctccgccccatacatacactactgcagcatcaccagcatcaccac
ggtcagcttagcaacgggggacacatccccctagcaacaggagaggaggacctggagatg
aggtcacttcctgttccagcccgtgaacccttggtgaacccagaggtgtctcctctgggt
cgtttgaacggggggatgaactaccccactattctcccctccttaatccgaagctctaca
caaactcacccacacagaccccaccacacctcctcctctgtcctgtcgccgctgcccccc
agtccccttcgcaagctgcaccacctaatgggacaacagagtcgtcctcggctgctggac
cagctggctgacttggtgccctctgccctgcttctggagctgctgacctgtccactgtgc
gccaacgccctggggaagctgcagctggacatgggggggccggagagctccaggggggag
gctgacaccctgcacaacttcccccagggagaggaggggcgcggtgggcgcgggcggcgg
cgtggcaggtgtgggtcggggcttgctctggcgttgaagcggtgccaggacaggctggcg
gagatgtgggggggcttcggggacagactgaggcgcatcgtggacagcaagtacttcaac
agaggaattatgatcgccatcctcatcaacacactgagcatgggcatcgagtaccaccag
cagccagaggagctcacagacatcctggagatcagtaacattgtgttcaccagtatgttt
gttctggagatgatgttcaagctcctggcctttgggatgtttggatacatcaagaacccg
tacaacatctttgacgggatcattgtcatcatcagcgtgtgggaggtcataggtcaggcg
gacggcggcctgtccgttctgcggacattccgtctgctgcgggttctgaagctggtccgg
ttcatgccggcgcttcggagacagctggtggttctgatgaagaccatggacaatgtagcc
accttctgcatgctgctgatgctctttatctttaccttcagtatcctaggcatgcacctg
tttgggtgtaaattcagcctccagacggagaacggagacaccatcccagacaggaagaac
ttcgattccctactctgggccaccgttacagtgtttcagatcctgactcaggaggattgg
aacgtggttctgtataacggcatggcctcgactactcctctggctgcgctctacttcgtt
gctctgatgacatttgggaattacgtcctcttcaacctgctggtggccatcttggttgaa
ggcttccaggcagagggagatgccaatcgctctgactctgatgatgagaaaagatctgat
aactttgaggaggaggagaagattggagagctgcgggacacagagctgaagatgtattct
ctgatgatgacagccaacggtcatgtggaccgcaactctctggctcctcctatcattatg
cgcacggcggccacgcccatgccaactccaaagagctcattgggccctgagtccattctg
ggggaggggcttatgtatggagaggctgggttagggtattcagaggcagggattggctgt
atggattctcgtcgtggaagtaatgcttccatcgacccctctgtctccgaccggcgctct
ctgtccagcccgggccggcggtcgcccctcccatccagatgtcaagggtctgtcagtggg
tggggcagtaggaggtccagttggaacagtctcagccgcgcccccagcctcaaacgcaga
gataccagcggagagagggagagtctgctatcaggggagggaggtggggaggaagaggag
gaggcggaggcagcaggagggggaaggagcaggctgtacccccgtccagggtccttagaa
ctgctacaggcgtcctctctgtgcccgtcagcaacgggggagtacgaggactgtaacggt
cggagtcttcaccacataacctacgacccaaccgtgaaccttgaccccaacaaggatcag
ctatcacctgaagatgatcttgaggatgataacccatgggtgcgcctgaaaaaagtgctg
gagagccgacagccactctggtgtagagaacacgaagagttaaccctgtatctgttctcc
cctcagaactcgtttcgtatatggtgtaaggggatgataagccataagctgtttgatcat
gttgtcctggtcttcatcttcctcaactgtatcaccatcgcactggaaagacccaacata
caactgcacagcattgagcgagtgtttctgagtgtctccaactacgtgttcactgtcatc
ttcctggctgagatgactgtcaaagtggtggcattggggttttgtctaggtcaacagagc
tatctgaagagcagttggaatgttctggatggcattctggtcctggtgtctctggtggac
atattggtgtcgttggcctcgactggaggaaaccgtatcctgggaatcctcagagtgctc
cgtctgctacggacactacgtcctctcagggtgattagccgagcaccaggtctgaagctg
gtggtggagactctgatcacatccctcaggcccattgggaacatcgtcctcatctgctgc
gctttcttcatcgtgtttggaatcctgggagtacaattgttcaaggggaagttttacgtc
tgtgaaggcccggacaccaaaaacatcaccaacaggtctgactgcctgctggccaactac
cagtggagacgtaggaagtacaacttcgacaacctgggacaggcactgatgtcgctgttc
gttctgtcatgtaaggacgggtgggtcaacatcatgtatgacggcctggacgctgtgggg
gtggaccagcagccaatgaggaaccataacccctggatgcttctctacttcatctccttc
ctgctcatcgtcagtttcttcgtgctcaacatgtttgtgggcgtggtggtggagaacttc
cacaagtgccgtcaggaccaggaggaggaggagcagcggctgcgagaagagaagaggctc
aagatcctggagaaaaagcgcaggagtaaggagaaggatggggccgaggcccaacggagg
ccctactatgcggactactctccaatccgtctctccatccacacgctgtgtaccagcaac
tacctggacctcttcatcaccatcatcatcggcatcaacgtcgtcaccatgagtatggag
cattacgaccagccacagtatctggaggatactctgaagtacttcaactatgtcttcaca
tgcatcttcatcatcgaggcactcctcaaactaatggcttttggactgcacaggttcttc
aaggacaggtggaaccagttggatgtggccattgtgttgttgtccatcatgggcatcacc
ctggaggagctgaagatgaacgcgtcacttcccatcaaccccaccatcatacgcatcatg
agagtactgaggatcgctagagtgttgaagctgttgaagatggctaaaggcatgagagct
cttctggacactgtcatgcaagccctgccgcaggtggggaatctgggtctcctcttcatg
ttgctgttcttcatctatgcagcgctgggagtcgagctcttcgggaaactggagtgtaat
gatagcaacccgtgtgaaggtctgaatcgacacgcaacgtttgagaactttgggatggcg
ttcctcacacttttcagaatctctaccggggacaactggaatggcattatgaaggacacg
ctgcgtgagtgtcgcccagaggatcgctcctgtcttacctacttgcccctggtgtcgccc
ctctacttcgtgaccttcgtcctcatggcccagttcgtgctggtcaatgtggttgtggcc
gtgctgatgaagcacctggaggagagcaacaaggaggccaaggaagaagccgagatggac
gccgagatagagctggagatggagagggccaggcgcctcagctccgcctccaacgcctca
tcactggtcacggcctacgcggggccgcgcccacactcgcctggtcaggaagaggagggg
cagtgcagccatgaggaagagcttctgtcaccaaagaagatgtctgtatccaggatgcat
tctctccccaatgacagctacatgttccgtccggtacggcccgctagcgccccatatact
ctacaagaggaacacaccagtccgcttggccactcctcaggctctgtgacatctgtgcgc
tcgcagccttgtgagaaccggagtctgttgcaggtgcccagtttgtctcctcccccttct
tctggctccaccctccctcgcatcgcacctcccaggccgagcccctcacccagagcaatg
cgtagacaggtggcggtaaaagtggtctccgtggaagttcagtgtcttcacaccagagac
tctttagagaaacaggaccccctttccgtccctccaccccagcctctagccctgctgccc
tcccacccctcctctcctcccaccaactctgaccctgctgatgaggaggtgtgtcacatc
acctgctctgcccgccattggtgggaaggacatggaagtgggcggagtcactccctctcc
ccctatgcctctcctgtctccccaccctccccctacccgaggagcagagggagcgcgctc
aatctgcgggtggcggggctaaaaggtcaagactctggaaaggtctttggcgtggactcc
cagtgctccttggataaaccctgtttccctgacgacctgcgacgacactccgttgaaatt
ttccttcctcctccgggcgacccgctcctggaatatgtaggggaggtgaccggaggaggg
aggaggcccgggggccaaggttcagagggcaaggttcacaggaagaagaagatgagcccc
ccgtgcatctccatccaccctccgtgtgaacccccaggccacgccctctcagagcccacg
gtggaatgcagcaccatgctgaggcgccggaccccgtcctccgaactgaccgacacacac
acaccctcacacacacacgcgcgccaccacacaccgactgacacacagacgcgtcaccac
acacagattaacacacacacacagacacgtcaccacacaccgattaccgctcacacaccc
atgcaaactcttccccagtcagtaacacacagtctgccacatgcgcacactcttattcac
acacgcactcaaccttatctgcatacacacactctgtctcacacgcacacactgtcttac
aggcactccccacccctgacatctgaaactagacaccattccctctgtgctaactacctt
cccctccctcagttcacttttgatccaacagagcccagacacatgagtggtaggtccccc
ggcctatcagacaatgacccagcctcaagcccctcccattttgacagaggagccgggttt
agctcagtgaacagtagaactgcccagtaa
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integrated database retrieval system