Esox lucius (northern pike): 105029910
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Entry
105029910 CDS
T04894
Symbol
nfkb1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
els
Esox lucius (northern pike)
Pathway
els04010
MAPK signaling pathway
els04210
Apoptosis
els04218
Cellular senescence
els04620
Toll-like receptor signaling pathway
els04621
NOD-like receptor signaling pathway
els04622
RIG-I-like receptor signaling pathway
els04623
Cytosolic DNA-sensing pathway
els04625
C-type lectin receptor signaling pathway
els04920
Adipocytokine signaling pathway
els05132
Salmonella infection
els05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
els00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
105029910 (nfkb1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
105029910 (nfkb1)
04218 Cellular senescence
105029910 (nfkb1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
105029910 (nfkb1)
04621 NOD-like receptor signaling pathway
105029910 (nfkb1)
04622 RIG-I-like receptor signaling pathway
105029910 (nfkb1)
04623 Cytosolic DNA-sensing pathway
105029910 (nfkb1)
04625 C-type lectin receptor signaling pathway
105029910 (nfkb1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
105029910 (nfkb1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
105029910 (nfkb1)
09171 Infectious disease: bacterial
05132 Salmonella infection
105029910 (nfkb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
els03000
]
105029910 (nfkb1)
Transcription factors [BR:
els03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
105029910 (nfkb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_3
Ank_4
Ank_5
GRP
Motif
Other DBs
NCBI-GeneID:
105029910
NCBI-ProteinID:
XP_028975412
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All DBs
Position
LG04:complement(1282179..1312834)
Genome browser
AA seq
937 aa
AA seq
DB search
MAGENEQYPPHPVPSYYDIGLDPLWETLHFPSLSHTNSLRTADGPYLQIIEQPKQRGFRF
RYGCEGPSHGGLPGASSEKNRKSYPQVKICNYQGAARVVVQLVTNSKDAHLHAHSLVGKQ
CDKGICIADLQPKDPSISFPNLGILHVTKKNVSKTLEDRMTEAFRMGYNCGIVIHPEIDT
LQAEVRVPRELTDHQRSLICSAASHQAKDMDLSVVRLMFTAFLPDSDGGFSRRLDPVMSD
PIFDSKAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQVRFYEDDETGLTWEAF
GDFSPTDVHRQFAIVFKTPKYRDPNLQKPTSVFVQLKRKSDNETSEPKPFTYHPQIIDKE
EVQRKRQKTLPNFQDYSGQGGSGGMYRGPGGGSATGGGPGSGGGGYFQGYPTYNNYGGGY
NTGFSPGMSGDATGIKHAPQGRAEDSGDDSDVDDDPASGTSVRVQAQSEDVTAGERSEEE
RVVEPGPGDRTGECLLEARLVDVAERQAEALFQYAVTGDIRYLLAPQHHLMAAQDENGDT
GLHLGVIHSQTDAVRSFAQVLSALPGEDVLNMRNDLYQTPLHLAVITQQKEAAEALILAG
ADVTLTDRHGNTALHLAAQQKEGVMVEFLLRHRELVELVDLPNASGRCCLHLAVLANSLS
SVRNLLLSGGSVEVQERSCGRTALHLATELDNVSLSGCLLLEGNANVDSCTYNGSSPLHI
AAGRGSVKLTALLMAAGADPHKENFEPLFFRDDENCVEEEDEEEQDEGYIPGTSPLNMAA
TPEVLELLNGKDYKPETPTSVLVPPQGDMHSLASETKRALCQALGGPEGGWESLAHTLGL
GILNSAFRLSPCPASTLLDSYEVSGGMVKGLLEGLRIVGNCMALSVLEGALSEKETLDPQ
STTQLLDAGLSDHIRDLKLDGRVDSGVCDSGVELSTA
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagagaatgaacaatacccacctcatccagtcccttcgtactatgacataggc
ttagacccgctgtgggaaactctgcatttcccttccttgtcacacaccaactcactccgg
acagcagatggaccctacctccaaattattgaacagccaaaacagcggggtttccgtttc
cgttacggctgtgaggggccatctcatggtgggctccctggggcctccagcgaaaagaac
aggaagtcctatccccaagtcaagatctgcaactaccagggcgcggctcgtgtggtggtc
cagctggtgaccaactccaaagatgcccatctccacgcccacagtctagtggggaagcag
tgtgacaagggcatctgcatcgcagacctccagcccaaagaccccagtatcagtttcccc
aacctaggcatcctccatgtgaccaagaagaatgtaagtaagacccttgaggaccgaatg
accgaggccttcaggatgggctacaactgtggcattgtcatccaccctgagatagacacc
ctgcaggcggaggttcgcgttccccgagaactcactgatcaccagaggagtctgatctgc
agtgctgcgtcccaccaggctaaagacatggacctgagtgtggtgcgtctcatgtttaca
gccttcctgccagacagtgacgggggcttctcccgcaggctggacccggtcatgtctgac
cccatctttgacagcaaagctcctaatgcgtccaacctgaagattgtgcgaatggatcgt
acagcaggctgtgtgacggggggagaggaggtctatctgctctgtgacaaggtccagaaa
gatgacatccaggtacgtttctacgaggatgacgagacggggttgacatgggaggctttc
ggagacttctcccccaccgatgtccaccgacagtttgccattgttttcaagacccccaaa
tacagagacccaaacctacaaaagcccacctcagtgtttgtgcagctgaagcgtaaatca
gacaacgaaacaagcgagccgaagccgttcacataccaccctcaaatcatagataaggag
gaggtgcagaggaagagacagaagacccttcctaacttccaggattacagcggtcaaggt
ggatctgggggcatgtaccgggggccggggggaggctcagctaccgggggaggccctggc
tcagggggaggaggttatttccagggttaccccacatacaataactatggaggtggatac
aacactgggttttcccctggcatgagtggtgacgccacgggcatcaaacacgctccacag
ggtagagcggaagacagcggcgatgacagcgacgtggatgatgacccggcctcagggacc
tcggtccgggtccaagcccagtcagaggatgtcactgctggggagaggagtgaggaggag
cgggttgtggaaccaggaccaggtgacaggactggagagtgtttactggaggccaggctg
gtggatgttgctgaaagacaggccgaagccctcttccagtacgctgtcactggggacatt
cgctacctgctggctccacagcaccacctcatggcggcccaggatgagaacggtgacaca
ggcctccacctgggggtgattcacagccagactgacgcggtccggagttttgcccaggtc
ctgtctgccctgcctggggaggatgtgctcaacatgcggaacgacctctaccagactcct
ttgcacctagcggtgataacccagcagaaggaggcagccgaggcccttatattggctgga
gcggatgtcactctgactgatcgccacggaaacacagctcttcacctggctgcccagcag
aaggagggagtgatggtggaattcctcctgagacacagagagctggtagaactagtggac
ctccccaacgcatcaggccgctgctgcctccacctggccgtcttggccaacagcctgagc
tccgtcaggaaccttcttttgagcgggggcagtgtggaggtccaggagagaagctgcggc
cggacggcgctacatctggccacggagctggacaacgtgtctctgtctggatgcctgctt
ctggagggaaacgctaatgtggacagctgtacctacaatggctccagtcctctccacata
gcagcaggcagaggctccgtcaaactgaccgctctgctaatggctgcaggtgctgatcct
cataaagaaaactttgagcccctgttcttcagagatgatgaaaactgtgtggaagaggag
gatgaggaggagcaggatgaaggctacatcccagggacaagtcctctcaacatggctgca
actcctgaggtattggaacttctgaatggcaaagactacaagccagagacccccacctcg
gtgctcgtccctcctcaaggtgacatgcatagcctggcctccgagaccaagcgggcgttg
tgccaggccctgggggggccggaggggggctgggagagcctggcacacacactggggctg
ggcatcctcaacagtgccttcagactgagcccctgtcctgccagcaccctgctggacagc
tacgaggtgtctgggggaatggtcaagggcctcctggagggactcaggattgtggggaac
tgcatggctttgagtgtactcgagggagcactgtctgaaaaagaaactttagacccccaa
agcaccacacaactcttagatgccggcctgtcagaccacattagggatctgaagctggat
ggacgggtggacagtggcgtgtgtgacagtggggtggagctctccacagcttga
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