Escherichia coli UM146: UM146_08095
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Entry
UM146_08095 CDS
T02000
Name
(GenBank) hypothetical protein
KO
K21090
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
elu
Escherichia coli UM146
Pathway
elu02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
elu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
UM146_08095
Enzymes [BR:
elu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
UM146_08095
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
CSS-motif
MSC
Motif
Other DBs
NCBI-ProteinID:
ADN71010
LinkDB
All DBs
Position
complement(1716569..1718167)
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AA seq
532 aa
AA seq
DB search
MQKAQRIIKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQRVVQFANHAVEELDKV
LLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLVQDGTLYCSSIFGYRNVPV
VDILAELPAPQPLLRLTTDRALIKGSPVLIQWTPAAGSSNAGVMEMINIDLLTAMLLEPQ
LPQISSASLTVDSRHLLYGNGLVDSLPQPENNENYQVSSQRFPFTINVNGPGATALAWHY
LPTQLPLAVLLSLLVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQCIGV
EILLRWNNPRQGWISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHVGINVA
PSHFRRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYRIARELHRKNVKLAIDDFG
TGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQE
QAKYLRRHGVHILQGYLYAQPMPLCDFPKWLAGSQPPPARHNGHITPIMPLR
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaagcacaacggatcattaaaacctatcgccgtaatcgaatgattgtttgtacg
atttgcgcactcgttacgctcgcttcgaccctgagcgtgcgatttatttcacagcgtaac
ttaaatcaacaacgggtagtacaattcgccaatcacgctgtagaggaattagataaagta
ctgcttcccctacaggcaggtagcgaagtcttgcttccgctgattggtctgccctgctct
gtcgcccatttgccattacgtaaacaggcggcaaaactccaaactgtgcgatccattggc
ctggtgcaagacggcacactttattgctccagcatttttggttatcgcaatgtgcccgtc
gtggacattctggctgaacttcctgcaccgcaaccacttttacgactgacgaccgaccgt
gccctgataaaaggcagtccggttttgattcaatggacgcctgcagcgggcagtagcaat
gctggggtcatggagatgattaacatcgacttactgacggcaatgctccttgaaccacaa
ctgccgcaaatcagtagcgccagcctgacggtggacagtcggcatttgctctatggtaat
gggctggtagattcccttccgcaacctgaaaacaatgaaaactatcaggtttcttcgcaa
cgctttccttttaccattaacgttaatggtccgggggctacggcgctggcatggcactat
cttccaacacaattaccgctggcggtgctgctaagtttacttgtgggctatatcgcctgg
ctggcgaccgcttaccgaatgagtttttcccgcgaaatcaatctgggcctggcgcaacat
gagttcgaattgttctgccagcctttgcttaatgcgcgcagccagcaatgtattggcgta
gagattttgctgcgctggaacaatccgcgtcagggctggatttcgccggatgtgtttatt
cctatcgcggaagaacatcatttaattgtgccactgacccgctatgtgatggcagaaacc
attcgtcagcgccatgttttcccgatgagtagtcagtttcatgttggcattaacgtcgca
cccagccattttcgccgtggtgtgctgataaaagatctcaatcagtactggtttagcgct
cacccgattcagcaactgatcctcgaaatcaccgaacgcgatgccttactggatgttgat
tatcggattgcccgcgagctacatcgtaaaaacgtcaaactggcgattgatgacttcggc
accggcaatagttcattttcctggcttgaaacattacgtcctgacgtgctgaaaattgat
aagtcatttaccgcagctataggttctgacgcggttaactcgacggtgaccgatatcatc
atcgcactggggcaaagactgaatattgaactggtggcggagggtgtggaaacgcaagaa
caggcgaaatatttgcgccgtcatggcgtccatattttgcaagggtatttgtacgcacag
ccgatgccactatgtgattttcccaaatggctggcgggcagccaaccgccgcccgcccgg
cataatggacatatcacccccattatgccgttacgttaa
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