Escherichia coli O157 H7 Xuzhou21 (EHEC): CDCO157_0186
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Entry
CDCO157_0186 CDS
T02122
Name
(GenBank) lysine decarboxylase 2
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
elx
Escherichia coli O157:H7 Xuzhou21 (EHEC)
Pathway
elx00310
Lysine degradation
elx01100
Metabolic pathways
elx01110
Biosynthesis of secondary metabolites
elx01120
Microbial metabolism in diverse environments
Module
elx_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
elx00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
CDCO157_0186
Enzymes [BR:
elx01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
CDCO157_0186
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AFJ27236
LinkDB
All DBs
Position
213022..215163
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AA seq
713 aa
AA seq
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MNIIAIMGPHGVFYKDEPIKELESALVAQGFQIIWPQNSVDLLKFIEHNPRICGVIFDWD
EYSLDLCSDINQLNEYLPLYAFINTHSTMDVSVQDMRMALCFFEYALGQAEDIAIRMRQY
TDEYLDNITPPFTKALFTYVKERKYTFCTPGHMGGTAYQKSPVGCLFYDFFGGNTLKADV
SISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAAPSGSTLLI
DRNCHKSLAHLLMMNDVVPVWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQAQWPVH
AVITNSTYDGLLYNTDWIKQTLDVPSIHFDSAWVPYTHFHPIYQGKSGMSGERVAGKVIF
ETQSTHKMLAALSQASLIHIKGEYDEEAFNEAFMMHTTTSPSYPIVASVETAAAMLRGNP
GKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPPQVDEAECWPVAPGEQWHGFNDAD
ADHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTGPYNLLFLFSIG
IDKTKAMGLLRGLTEFKRSYDLNLRIKNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIRKH
DLPGLMLRAFDTLPEMIMTPHQAWQRQIKGEVETIALEQLVGRVSANMILPYPPGVPLLM
PGEMLTKESRTVLDFLLMLCSVGQHYPGFETDIHGAKQDEDGVYRVRVLKMAG
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcattgccattatgggaccgcatggcgtcttttataaagatgagcccatcaaa
gaactggagtcggcgctggtggcgcaaggctttcagattatctggccacaaaacagcgtt
gatttgctgaaatttatcgaacataaccctcgaatttgcggcgtgatttttgactgggat
gaatacagtctcgatttatgtagcgatatcaatcagcttaatgaatatctcccgctttat
gccttcatcaacacccactcgacgatggatgtcagcgtgcaggatatgcggatggcgctc
tgtttttttgaatatgcgctggggcaggcggaagatatcgccattcgtatgcgtcagtac
accgacgaatatcttgataacattaccccaccgttcacgaaagccttgtttacctacgtc
aaagagcggaagtacaccttttgtacgccgggtcatatgggcggcaccgcatatcaaaaa
agcccggttggctgtctgttttatgactttttcggcgggaatacccttaaggctgatgtc
tctatttcggtcaccgagcttggttcgttgctcgaccacaccgggccacacctggaagcg
gaagagtacatcgcgcggactttcggcgcggaacagagttatatcgttaccaacggaaca
tcgacgtcgaacaaaattgtgggtatgtacgccgcgccatccggcagtacgctgttgatt
gaccgcaattgtcataaatcgctggcgcatctgttgatgatgaacgatgtagtgccagtc
tggctgaaaccgacgcgtaatgcgttggggattctgggtgggatcccgcgccgtgaattt
actcgcgacagcatcgaagagaaagtcgctgccaccacgcaggcacaatggccggttcat
gcggtgattaccaactcaacctatgatggcttgctctacaacaccgactggatcaaacag
acgctggatgtcccgtcgatccacttcgattccgcctgggtgccgtacacccattttcat
ccgatctaccaggggaaaagtggtatgagcggcgagcgtgttgcgggaaaagtgatcttc
gaaacgcaatcgacccacaaaatgctggcggcgttatcgcaggcttcgctgatccacatt
aaaggtgagtatgacgaagaggcgtttaacgaagcctttatgatgcataccaccacctcg
cccagttatcccattgttgcttcggttgagacggcagcagcgatgctgcgtggtaatccg
ggcaaacggctgattaaccgttcagtagaacgagctctgcattttcgcaaagaggtccag
cggctgcgggaagagtctgacggttggtttttcgatatctggcaaccgccgcaggtggat
gaagccgaatgctggcccgttgcgcctggcgaacaatggcacggctttaacgatgcggat
gccgatcatatgttcctcgatccggttaaagtcactattctgacgccggggatggacgag
cagggcaatatgagcgaggaggggatcccggcggcgctggtggcgaagttcctcgatgag
cgtgggatcgtggtagagaaaaccggcccatataacctgctgtttctctttagtattggc
atcgataaaaccaaagcaatgggattattgcgtgggttgacggaatttaaacgctcttac
gatctcaatctgcgaatcaaaaatatgcttccggatctgtacgcagaagatcccgatttc
taccgcaatatgcgtattcaggatctggcgcaagggatccataagctgattcgtaaacac
gatcttcccggtttgatgttgcgggcattcgatactttgccggagatgatcatgacgcca
catcaggcatggcagagacagattaaaggtgaagtagaaaccattgcgctggaacaactg
gtcggtagagtatcggcaaatatgatcctgccttatccaccgggcgtaccgctgttgatg
cctggagaaatgctgaccaaagagagccgcacagtactcgattttctactgatgctttgt
tccgtagggcaacattaccccggttttgaaacggatattcacggtgcgaaacaggacgaa
gacggcgtttaccgcgtacgagtcctaaaaatggcgggataa
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