Epinephelus lanceolatus (giant grouper): 117246681
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Entry
117246681 CDS
T07331
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04020
Calcium signaling pathway
ely04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117246681
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117246681
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ely04040
]
117246681
Ion channels [BR:
ely04040
]
Ligand-gated channels
Glutamate (ionotropic)
117246681
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
NMDAR2_C
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
117246681
NCBI-ProteinID:
XP_033466488
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All DBs
Position
21:29334964..29428582
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AA seq
1391 aa
AA seq
DB search
MAIPRGHPPPSPWPPLFLLLLFLLLLISSPLPLQARPLLLHPSINVAVVFSGSSYQNEVR
GRLSGENFVDLPVVVSPVTVLVNDTNPRDLLTRLCDTMATEKLHGVVFEDDVGSGADAQV
AEVAQILDFLSTQTALPIVGISGGSAVVIPYKAEGSSFLQMGASLEQQIVCMFKLMEEYD
WGEFAVITSMLPGYDTFVDIVQSYTDTSYFLWNLQDILSLEMSVGANDVKTKRMLQQVDS
RVLLAYCSYEEAQYLFSQAAEVGLLGPGYIWILPSQAVGNPDSPPPVSFPVGVIGVITEQ
WRKSLRQRVREGVAIVAKGAESFKKQYGFIPEGHGDCTKLAKHSDNNTLFRHMLNVTWER
RDLSFNSQGFLSNPALVIIALDRERLWDKVGTYARGIIQVRYPVWPRYGSFLEQVSDDRH
LTVATLEEHPFVMVENVDPGTGTCVRNTVPCRRQSNLTDGIIGHSESYTKLCCKGFCIDI
LKKLSRTIKFSYDLYLVTNGKHGKLVRGTWNGMIGEVVYRRADMAIGSLTINEERSEIID
FSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYFSPVG
YNRSLVSAKAPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLA
SYTANLAAFMIQEQYIDTVSGLSDKKFQKPQEHYPPFRFGTVPNGSTERNIRSNYPDMHT
HMMKYNQKGVEEALESLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGI
ALQKDSRWKRPIDLALLQFLGDGDTQRLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYM
LLVAMGLSLLVFAWEHLLYWKLRHSLRKSHKLDFLLAISRGIYSCFNGVEDPGRSSGLAK
PDLTSNYAQANMLKMLRTAKDLVSTANVETSLDNATKTIEHLSRHGGSLPVRIPQVATEA
VPGGFAYITENHCSLTPPLTAVTSLKQQRGVTRPTPLRYTLPTRSTSCLYDRPLPVSSLS
SPHLAVGEPLPHQHPHHYQTTGRLYVDTHPHSPFIPYTDLQLPDIYTSHPLSSPQNQHLQ
AGFSRRKRRSKSFQCEDGDVGRTQREQEKNDTSPVYMSELKANHLQDNHISAPSVDNIYT
GEGMCPRVENYSSWPPEDLVLRGRRRHRRPSFLKATWGSEQMRQLDESQSSLSSQSPSTL
PDLFPCILTPTTPAKPHNPAHLRNNLCLPRNQAYLHIREDQRRPNGRKGQRLRYSHSTHL
PTYGEAVRHGAGLGRGMVRRATSLLSRQYAHYLNSYPGLPLYHGPLDLQHHSQASSGHPS
PVCQLLACGGGRCGGQRALLYQDSVYGAYGVYQGSQTGSEALGGQGAGGQPVGSPCVLRP
WRRVSSLESEV
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atggccattcccaggggacatcctcctccctctccttggcctcctctcttcctcctcctc
ctcttcctcctcctcctcatctcctccccgctccccctgcaggcccggccgctcctcctc
cacccgtccatcaacgtggcggtggtgttcagcggctccagctaccagaatgaggtcaga
ggtcgtctcagcggggaaaactttgtcgacctgcctgtggtggtcagcccggtgaccgtg
ctggtcaacgacaccaacccccgcgacctgctgacacgcctctgcgacaccatggcaacg
gagaagcttcacggtgtggtgttcgaggatgatgtgggctctggtgctgacgctcaggtg
gcagaagtagcacagatcctggacttcctctccactcagacagctctaccaattgtgggc
atcagcggcggctctgcagttgtcataccgtacaaggctgaggggtcctccttcctgcag
atgggagcgtctctggagcagcagattgtctgcatgttcaagctcatggaggagtatgac
tggggcgagtttgcagtgatcaccagcatgctgccgggctacgacacctttgtggatata
gttcagtcctacacagatacctcctatttcctgtggaatctacaggatatcctgtctctg
gaaatgtctgttggggccaatgatgtgaaaaccaaacgcatgctgcagcaggtggactcc
cgggtcctgctggcgtattgctcctacgaggaggcgcagtacctgtttagtcaggcagct
gaggtgggtctgctggggccaggctacatctggatcctccccagtcaggccgtgggcaac
cccgacagccctccacctgtcagcttccccgtcggtgttattggtgtgatcacggagcag
tggaggaagagcttgcggcagagggtgagggagggcgtcgccatcgtagctaaaggggcc
gagagcttcaagaagcagtacgggtttattcctgagggacatggcgactgcaccaaactg
gctaaacactcagacaacaacactctgttcaggcacatgctgaatgtgacgtgggaaagg
agagatctgtcattcaacagccaaggcttcctctccaaccctgccttggtcatcatcgct
ctggaccgagagagactctgggacaaggtgggtacgtacgctcgagggatcattcaggtt
cgctaccccgtctggcctcgatacggcagcttcctggagcaggtttccgatgaccgtcac
ctgaccgtggccacgctggaggagcatcccttcgtcatggtggagaacgtggacccgggc
acaggcacatgtgtccgcaacacggttccctgcaggcgccagtccaatctcacagacggt
attatcggccactctgagtcctacaccaaactgtgctgtaagggcttctgcatagacatc
ctgaagaaactgtcccgcactatcaagttctcctacgacctctacctggtcaccaacggg
aaacatggcaagctggtccgtgggacttggaacggcatgattggggaggtcgtgtaccga
cgagctgacatggccattggctctctcactatcaatgaggaacgctcggaaatcatcgac
ttctccgtgccgtttgttgagacaggcatcagcgtcatggtagcccgcagcaacgggacg
gtttccccatctgcctttcttgagccctacagcccagcagtttgggtcatgatgtttgtg
atgtgcctcactgtggtggcggtgacagtttttgtgtttgaatacttcagtccagtcggc
tacaaccgcagtctagtcagcgccaaagctcctggtggtccgacgttcaccatcgggaag
tcggtgtggctgctgtggggcattgtcttcaacaactcggtccccattgaaaaccccaaa
ggaacgaccagtaagatcatggtcctggtctgggccttctttgctgtcatcttcctggcc
tcatacactgccaacctggctgccttcatgattcaggagcaatatatcgacaccgtgtcc
gggctctctgacaagaagttccagaaaccacaggagcattaccctcctttccgcttcggg
acggtcccaaacgggagcacggagaggaacatccgcagcaactaccccgacatgcacaca
cacatgatgaagtacaaccagaagggggtggaagaagctctagaaagcctcaaaaccgga
aagctggacgccttcatctacgacgctgctgttttgaactacatggcggggaaggatgag
ggctgcaagctggtgaccatcggcagcgggaaagtgtttgccaccacgggatacggcatc
gctctgcagaaggactcccgctggaaacggcctattgacctggcgctgctgcagttctta
ggagacggtgacacccagcgcttggagacggtgtggctgtcgggcatctgccagaacgag
aagaacgaagtgatgagcagtaagctggacatcgacaacatggcgggcgtcttctacatg
ctgctggtggccatgggcctcagcttgctggtctttgcctgggaacacctgctttactgg
aaactacgacactccctccgcaagtctcacaaacttgacttcctgctggccatcagtagg
ggtatttacagttgtttcaacggcgtggaggatcctgggcgttcctctggtttggccaaa
cccgacctgacctccaactacgctcaagctaacatgctgaagatgcttcgcactgccaag
gacctggtctccaccgccaatgttgagacctctctggacaacgccaccaagaccatagag
catttgagtcgtcatggcggcagtttgcctgttcgtatcccgcaagttgccacggaggcc
gtaccgggaggatttgcttacattacggagaatcactgctcgctgaccccgcctctgact
gctgttacttctctgaaacagcagaggggtgtgaccaggcccacgccactgcgctacacg
ctcccgacacgctccacttcatgtctgtatgacaggccacttcctgtgtccagcctcagc
agcccccatctggccgtgggcgaaccgctccctcatcagcacccacaccactaccagacg
actgggagactttacgtagacacccatcctcactcacccttcatcccctacactgacctc
caactacctgacatctacacctctcacccgctctcctcgcctcaaaaccagcacctccaa
gcgggcttctcccgacggaaaaggaggtccaagagcttccagtgtgaggatggggacgta
gggagaacacagagggagcaggaaaagaatgacacaagtcccgtctatatgagcgagctc
aaagccaaccacctccaagacaaccacatctccgccccaagcgttgacaacatctacaca
ggggaggggatgtgtcctcgggtggagaactacagctcctggcccccagaggatctggtg
ctgagagggagacgcaggcaccgccgcccctctttccttaaagcgacatggggcagcgag
cagatgcgccagctcgacgaatcccagtcatccctgtccagccaatcaccttccaccctg
ccggacttgttcccatgcattcttacaccgaccacacccgcaaagccccacaaccccgcc
caccttcgaaacaacctgtgcctcccgcggaaccaggcctacctccacatacgggaggac
cagaggaggcccaatgggcgtaagggccagaggctgcgctactcccactccacccacctc
cccacgtacggagaagcagtgcgacacggggctgggttagggcgggggatggtacgcaga
gccaccagcttgctcagcagacagtacgcccactacctgaactcataccctggactaccc
ctctaccacggccccctggacctgcagcaccacagccaggcctccagcggccacccgagc
ccagtgtgccagctgctggcttgtggtggcgggagatgtggaggccagcgggctctgctg
taccaggacagtgtgtatggggcctatggggtctatcagggatcccagactggttcagag
gccctgggaggtcagggagcagggggccagcctgtggggagcccctgcgtactccgtccc
tggcgacgggtgtccagtctggagtctgaggtgtga
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