Epinephelus lanceolatus (giant grouper): 117248583
Help
Entry
117248583 CDS
T07331
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
117248583 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ely03021
]
117248583 (polr1b)
Enzymes [BR:
ely01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
117248583 (polr1b)
Transcription machinery [BR:
ely03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
117248583 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
DUF1186
Motif
Other DBs
NCBI-GeneID:
117248583
NCBI-ProteinID:
XP_033469676
LinkDB
All DBs
Position
22:complement(13814189..13821449)
Genome browser
AA seq
1134 aa
AA seq
DB search
MDPSEKWSNLPKAPSLRNLTEGRFGVLTERQHAAVQDLTKAHIESFDQAVTDGLSRVVQA
IPPLEFTFKNDRISLSFVEATIYNPVVAKGNICRDMKVFPAECRGRKCTYKGKLVADVSW
SINGVPKGIIKQSMGHVPIMVKSKLCNLHGMSPKELVEHHEEAEEMGGYFIVNGNEKVVR
MLIMPRRNYPIAMSRPKWKSRGQGYTQYGISMRCVREEHTAVNMNLHYLENGTVMLNFIY
QKELFFLPLGFALKALVDFTDFQIYQELIKGREDNSFYKSCASEMLRIVAEEGCITRSKV
LNYLGERFRVKMNLPEWYTNEQCANFLLDECICIHLKSDMEKFYLLCLMTRKLFTFAKEE
CMEENPDSIMCQEVLTPGQLYLMFMKERMSAWLTSVKLSFDKRGSRLSGGWTAENVMKIF
NMGTDLTKPFEYLLATGNLSSKSGLGMLQNTGLCVVADKLNFIRYLSHFRCVHRGAAFAK
MRTTSVRKLLPESWGFLCPVHTPDGEPCGLMNHMTAICEIVAPTMPTTSLPALLCSLGVT
PVDGSPGQAFSDCYPVVLDGAVVGWVETELAPVVVDSLRRFKVLKEKKIPPWTEIVLVPK
TGKASLYPGLFLFTAPCRMMRPVRNLALGKQELIGTFEQLYINVGILENEIESGVTTHQE
LFPHSMLSVVASFIPYSDHNQSPRNMYQCQMSKQTMGFPLHSFMNRSDNKLYRLQTPQSP
MVRPCMYDHYNLDNYPSGTNAIVAVISYTGYDMEDAMIVNKSSWERGFAHGSIYKTELVD
LAEKVRGEDSVVFGTKPGDPKINERLDADGLPFIGSTLKYGDPFYSYINLNTGQTFVNYY
KSQEACVVDNIKICSNDNGSGRFKRVCITMRVPRNPTIGDKFASRHGQKGILSRLWPAED
MPFTESGMAPDILFNPHGFPSRMTIGMLIESMAGKSGALHGLSHDATPFTFSEENSALEY
FGELLRAGGYNYYGTERLYSGVSGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKV
TNQPVGGRNIQGGIRFGEMERDALLAHGSSFLLHDRLFNCSDRSVAQVCVDCGSLLSPLL
EKPPPYWSAMRHRKTVCALCGKSDSIDSVSVPYVFRYFVAELAAMNIKVKLDVK
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggacccttcagaaaagtggagtaatttgcccaaagctccgagtctgaggaatctgaca
gagggaaggtttggtgtcctgacggaacgtcaacatgctgctgtgcaggatctgaccaaa
gctcacatcgagtcctttgaccaggctgtcactgacggactcagccgcgtcgtgcaggcc
atccctcccttggagttcacattcaaaaatgacaggatcagcctttccttcgtcgaagcc
accatctacaacccagtggtggccaaagggaacatctgcagggacatgaaagtgtttcca
gcagagtgcagaggaagaaagtgtacatacaaaggaaagctggtggcagatgtcagctgg
tcaatcaacggagttcccaaaggcatcatcaagcagtccatgggtcacgtgccaatcatg
gtgaagtccaagctgtgtaacctgcacggcatgtcccccaaagaactcgtagagcaccat
gaagaagcagaggaaatgggaggttatttcatagtgaatggaaatgagaaagttgtccgc
atgctgattatgccacggaggaattatcccatcgccatgtcaagacccaagtggaagagc
agaggccagggatacactcagtatggtatttccatgcgttgcgtgagggaggaacacaca
gccgtcaacatgaacctgcattatctggaaaatgggacggtgatgctgaactttatttac
cagaaagagctcttcttcctcccacttggctttgcactcaaggccctcgtagacttcaca
gactttcagatctaccaggagctgatcaaaggccgtgaggacaattccttctataagagc
tgtgcgtctgaaatgttgcgcattgttgcggaggagggctgcatcacccgcagcaaggtg
ctaaattacctgggagagcgcttcagggttaagatgaaccttcctgagtggtacacaaac
gagcagtgcgccaacttcctgctagatgagtgcatctgtatccacctgaagtcagacatg
gagaagttctacctgctgtgtctcatgaccaggaagcttttcacgtttgccaaggaggag
tgcatggaggaaaaccctgacagcatcatgtgtcaggaagtgctcactcccggtcagctc
tacctcatgtttatgaaggagagaatgtccgcctggttgacgtctgtgaagctgtccttt
gacaagagaggcagcagactgagtggaggatggacggctgagaacgtgatgaagatattc
aacatgggcactgacctgaccaaaccctttgaatatctgctggccactgggaacctcagc
tctaagtctggtcttggaatgctgcagaacacaggcctgtgtgtggtagctgacaagctc
aacttcatccgctacctgtcccacttccgctgtgtgcacagaggagcagcgttcgccaag
atgaggaccacctctgttcgtaagctgctgcctgagtcctggggcttcctgtgtcccgtc
cacactccagatggagagccgtgtggactcatgaaccacatgacagccatctgtgagatt
gtggcaccaaccatgcccaccacctccctgcctgctctgctctgttccctcggtgttact
ccagtggatggatctcctggccaggccttttcagactgctaccctgtggtcctggatggg
gccgtcgtaggctgggtggagactgaattagccccagttgtggtcgactcactgcggagg
tttaaggtgctgaaagagaagaagatccctccctggactgagattgttctggtgccaaaa
acaggcaaggccagcttgtacccaggcctgttcctcttcacagcaccctgccgtatgatg
cggcccgtacgcaacttagctcttggcaagcaagagttgattggcacctttgaacaactt
tacatcaacgtgggcatcttggagaatgagatcgagtcaggtgtgaccacacaccaggag
ctcttcccgcacagtatgctcagcgtggtggctagcttcattccttactcagaccacaac
cagagtcctaggaacatgtaccagtgtcagatgagtaagcagactatgggtttccccctg
cactcattcatgaatcgctcggataacaagctgtaccgactccagaccccacagagcccc
atggtcaggccctgcatgtatgaccattacaacctggacaactaccccagtggcacaaac
gccatagtggccgtcatatcctacacaggctacgacatggaggatgccatgattgtgaac
aagtcgtcatgggagaggggctttgcacacggaagtatctataagactgagctggttgac
ctggcagagaaagtgaggggagaagacagcgtggtgtttgggaccaagccaggtgaccct
aaaataaatgaaagactggacgctgatggactgccattcattgggtcgacactgaagtat
ggagaccccttttacagctacatcaacctaaacactggccagacctttgtcaactactac
aagagccaagaggcctgtgtggtcgacaatataaagatctgcagcaatgacaatggctcg
ggccgttttaaacgtgtctgcatcacaatgcgagtgccacgaaaccccaccattggtgac
aagttcgctagtcgccacggtcagaagggtattctgagccgcctgtggccggccgaggac
atgcccttcacagagagcggcatggctcccgacatcctcttcaacccccacggcttcccc
tcccgtatgaccatagggatgctgattgagagcatggccggcaagtctggcgccctgcac
ggcctgagccacgacgccacacccttcaccttctcagaagagaactccgcactggagtat
tttggcgaattgctccgggcaggtggatacaattactatggcacagagcggctctacagc
ggagtgagtggtctggagctagaggccgacatcttcatcggagtcgtctactaccagcgg
ctacgtcacatggtctccgacaagttccaggtgaggaccacgggagcacgtgacaaggtg
accaaccagccagtgggagggaggaacatccagggaggcatccgttttggggagatggag
cgagacgccctgctggcccatggctcttcattcctgcttcatgatcgcctcttcaactgc
tcagaccgatcagtggctcaggtgtgtgtcgactgtggcagcctgctttcccctctgttg
gagaaaccgccaccctactggtcggccatgcgtcatcgtaagactgtctgcgctctgtgt
ggtaaaagtgactctattgactcggtgtctgtcccgtacgtcttccgctactttgtagcc
gagctcgcagcaatgaacatcaaagtcaaattagatgttaagtga
DBGET
integrated database retrieval system
