Epinephelus lanceolatus (giant grouper): 117251309
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Entry
117251309 CDS
T07331
Symbol
scn1laa
Name
(RefSeq) sodium channel, voltage-gated, type I-like, alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ely04040
]
117251309 (scn1laa)
Ion channels [BR:
ely04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
117251309 (scn1laa)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
PKD_channel
GPHH
Zip
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
117251309
NCBI-ProteinID:
XP_033473382
LinkDB
All DBs
Position
3:complement(22529945..22566159)
Genome browser
AA seq
1988 aa
AA seq
DB search
MEQLLVPPGPDSFRPFSRESLKAIEARIAEETAKKSEGEKEKRDDEENELKPSRDLEAGK
SLPLLYGDPPKNMVSIPLEDLDPYYCNQKTFIVLNKGKSIFRFNAAPALYLLSPFNPLRR
ISLRILVHSLFTIVIMCTILVNCVFMTYSTVPDHLKFVEYTFTAIYTFESLVKILSRGFC
IGKFTFLRDPWNWLDFSVIVMAYVTEFVSLGNFSVLRIFRVLRALKAISVIPGLKTIVGA
LFQSVKKLTDVMILTVFCLSVFALIGLQLFMGHLKQKCVWNPDNSTYNGTTEETFDWETY
ILNKSNLYYLKGKRDPLLCGTGRGAGECPEGFTCRKVGKNPDYDYTSFDSFGWAFLALFR
LMTQDFWENLYQQTLRAAGKPYMIFFVLVIFLGSFYLINLILAVVAMAYEEQSQATQKEE
LEKEEEYKAMIDQLRRQQEDAQAAATAAAAESGEASNKASGPESSTDTSKLSSKSAKERR
NRRRKRKEEEGKEAGERVPKSESQDSMKKARCRFSVDANQLNYDMKCSLAHQSFLSFRGP
LFSSRRNSRTSLFSFRSQTRDAGSENGFADDENSIFEDNLSRRGSLFRPPSRDRRSSSLS
QCSFLAHLLLPPNGIKHSSVDCNGVVSLVGGNSLPSSPVGLLLPKVTVDMASTGDNADTS
DTEYRQTGGGTEQEFMDFLEGPEARQRVHSIASVITSTMEELEESRQKCPSCWYNFANTF
LIWECCPAWLKIKRVIKLIVMDPFVDLAITICIVLNTLFMAMEFYPMSESFSNMLAVGNV
VFTSIFTAEMVLKLLALDPYYYFQERWNIFDGIIVSVSLMELCFSNSGGMSVLRSFRLLR
VFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYRDCVCKISA
DCTLPRWHMSDFFHSFLIVFRVLCGEWIETMWDCMEVAGTTKCIIVYMMVMVIGNLVVLN
LFLALLLSSFSADNLAATEDDGDNNLQIAIARIQKGIAFLKSLLRSSCNSVCLRRKKKGK
DEDKTLNELHKPLGPNGVPNHTIKDFPKSGNGDVTGVDKNGDKYIVSSKSDDSIMSFINN
PSLTVTVPIAVGESDFENANTEDFSSASSDVPGCHVPVDDDGEISSSEGSTIDGLPGGEG
GESEDFESEECMEPDACFTDGCVQRFQCCQVNVEVGWWKVWWTLRRTCFRIVEHNWFESF
IIFMILLSSGALALEDIYIEKRKTIKTMLEFADKIFTYIFILEMLLKWVAYGYAKYFTNA
WCWLDFLIVDVSLVSMIANVLGFSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALLGA
IPSIFNVLLVCLIFWLIFSIMGVNLFAGKYGKCICRTTGEPFTPLEVKNKTECDGKLGAR
WTNYKINFDNVGSGYLALLQVATFKGWTNIMYAAVDSQSKQEQQPEYEINLLMYMYFVVF
IIFGAFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRP
SNKIQGYIFDFTTNQAFDIVIMVLIWLNMVAMMVETDGQSEQKENVLYWINFVFIIIFSG
ECLLKMIALRQYFFTNGWNVFDFIVVILSIIGVSLSKVIEKYFVSPTLFRVIRLARIGRV
LRLIKSAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKEEGIDDLFN
FETFGNSMICLFQITTSAGWDGLLAPILNKHEDDCDSFTEHPGSRVKGDCGNPSVGIAFF
VSYIIICFLIVVNMYIAVILENFGVATEESTDPLSEDDFETFYEVWERFDPHASQFIVYN
TLSEFADALDPPLRIAKPNKMELISMDLPMVSGERIHCLDILFAFTKRVLGEGGEMDILR
AQMEERFMASNPSKVSYEPITTTLRRKQEDTSATIIQRAFREYAKRQGATKPFVGSSDYI
EKDKTYNDKEDVVTDKLKDISSADKSELTPSTASQISSNSVATNGANKYEKDKSEKEVEG
KDVREQYT
NT seq
5967 nt
NT seq
+upstream
nt +downstream
nt
atggaacagctgcttgtaccaccaggtccagacagcttccgcccgtttagtcgtgagtcc
ctcaaagccatcgaggcgcggatcgccgaggagacagccaagaagtccgagggagagaag
gaaaaacgtgacgatgaggagaatgagctcaagcccagccgtgacctggaagcgggcaaa
tcacttcctcttctgtatggggaccctcctaaaaacatggtgtcgataccgctggaggac
ctggatccctactactgtaatcagaaaactttcatagtattaaacaaagggaagagcatc
ttccgcttcaacgccgctcctgccttgtacctcctgagccccttcaaccctctcagaaga
atatcacttaggattttggtacactcattgttcactatcgtgatcatgtgcaccatcctc
gtcaactgtgtatttatgacttatagtacagtgcctgaccacttaaagtttgtagagtac
acatttactgcaatctatacgtttgaatccctggttaaaattttatctcgagggttctgc
atagggaagttcacgttcctaagagatccctggaactggctggatttcagtgtcattgtc
atggcgtatgtaacagagtttgtcagcctgggcaatttttcagttcttcgcatattcaga
gtgctgagagctttaaaagccatttcagttatcccaggcctgaagaccattgttggtgca
ttgttccagtcagtgaagaagcttactgatgtgatgattctcaccgtcttctgcttgagc
gtctttgccctcatagggttacaactgtttatgggccatttaaagcaaaagtgtgtgtgg
aaccctgacaattcaacctacaatggcacgacagaggaaactttcgactgggaaacgtac
attctcaataagagtaatttgtattaccttaaaggcaaacgagatccattgctttgtgga
actggccgtggcgctggggagtgtccggaggggttcacttgcaggaaagtgggaaagaac
ccagactatgattacaccagctttgactcatttggttgggccttccttgctctgtttaga
ctgatgacacaggatttctgggaaaacctttaccagcagacgttgcgggcagctggaaag
ccctacatgatcttttttgtgctggtgatattcctcggttccttctacctgatcaacctg
atcttggctgtagtcgccatggcctacgaggagcagagccaggccacccaaaaggaggag
ctagagaaggaggaagagtataaggccatgattgaccagctgagacggcagcaggaggac
gctcaggcagcagcaactgcagctgctgcagagagtggggaggccagcaacaaagccagc
ggccctgagagctccactgacacctccaagctcagctccaaaagtgccaaagagaggcga
aacaggcgaagaaaaaggaaggaagaggagggcaaagaggctggtgagagggttcctaaa
tccgagtcgcaggacagtatgaagaaagctcgctgccgcttctctgtggatgcaaaccag
ctcaactatgacatgaaatgctcattagcacatcagtcctttctgagttttcgtggaccc
ctgttctcatccagacggaacagtcggaccagccttttcagtttccggagccaaacacga
gacgcaggctcagaaaatggatttgccgatgatgagaacagcatttttgaggacaacctg
agtcggaggggctctttgtttcgtcccccgagtcgtgatcgacgcagcagcagtctgagc
cagtgcagcttcttggcgcatctcctacttccacccaatgggatcaagcatagttctgta
gactgcaatggggttgtgtctctggtgggagggaattcgctcccatcgtcacctgtgggg
ctccttctacctaaagtgacagtagatatggcttccactggagacaatgccgacacctca
gacacggaatacagacagaccggtggaggaacagaacaggagttcatggacttccttgag
ggcccagaggccaggcagagagttcatagtatagctagtgtcataaccagcacaatggag
gagctcgaagagtcaaggcagaagtgtccttcttgctggtacaattttgccaacaccttc
ctcatctgggaatgttgtcctgcatggctaaagatcaagagggtgattaaactaattgtg
atggatccatttgtggatctagccatcaccatctgcatcgttctcaacacactgtttatg
gccatggagttttatccgatgagcgagagttttagcaatatgctggctgtgggcaatgtg
gtattcactagcatcttcacagctgaaatggtcctcaagcttcttgctttggatccatac
tattacttccaggagcgatggaatatttttgatggaatcattgtcagtgtaagcttgatg
gagctttgcttctcaaactcgggtggcatgtctgttctgagatcattcagattgctaaga
gtattcaagttggcaaaatcatggcccactcttaacacactgatcaaaataattggtaat
tcagtgggggccttgggcaatctgacgctggtgctggccattattgtcttcatctttgct
gtggtgggcatgcagctgtttggaaaaagctatagggactgtgtgtgtaaaatctctgcc
gactgcactctgccccggtggcacatgagtgacttcttccattcattcctcattgtgttc
cgagtgctttgtggagagtggatagagaccatgtgggactgtatggaggtggctgggacg
accaagtgcatcattgtctacatgatggtcatggttattggaaaccttgtggtgctgaac
ctgttcctggccctattgctgagttcatttagcgctgacaacctggcagcaacagaagat
gacggtgacaacaatttgcagattgccatagcacggattcaaaagggcattgccttcctc
aagtccctacttcgaagcagctgcaatagtgtttgcctcaggagaaagaagaaagggaag
gacgaggacaaaaccctgaatgagctccacaaacctttagggccaaacggtgtccccaac
cataccatcaaagactttcctaagagtggaaatggtgatgtgactggagtggacaaaaat
ggagacaagtacatagtcagcagcaagagtgatgattctataatgtctttcatcaacaat
cctagtctgactgtcactgttcctattgctgtgggagagtctgactttgaaaacgccaac
acggaggacttcagcagtgcctcgtctgatgtaccaggatgccatgtgcctgtagacgac
gatggcgagatcagctcctctgagggcagcacaatagacggtttgccaggcggggaggga
ggagagtctgaagactttgaatcagaagaatgtatggaacctgatgcctgctttactgac
ggctgtgtgcaaaggttccagtgctgtcaggtaaatgtggaagtgggctggtggaaggtg
tggtggacgcttagaaggacctgcttccgaattgtggagcacaactggtttgagagcttc
atcatctttatgatcctgcttagcagtggagcattggcacttgaggacatctacattgag
aagaggaagaccattaaaacaatgttggaatttgcagacaaaatcttcacgtacatcttc
attctggagatgttactgaagtgggtggcatatggatatgccaagtattttacaaatgcc
tggtgctggctggacttcctcattgttgatgtctcactggtcagtatgatagccaatgtc
ttgggattttctgaactcggtgccatcaagtctctgagaaccctgcgagctctgaggccg
ctgagagcactgtctcggtttgaaggcatgagggtggttgtcaatgccctgctcggagcc
attccttccatcttcaatgtgttgctggtgtgtctcatcttctggctcatcttcagcatc
atgggggtcaacttatttgcggggaagtatggcaaatgtatctgcagaaccacaggcgag
ccattcaccccattagaagtgaaaaacaagacagagtgtgacggcaaacttggtgctcgc
tggacgaactacaaaatcaactttgacaatgttggctcaggttaccttgcactgctgcag
gtggccacattcaagggctggacgaacatcatgtatgctgctgtggactctcaaagcaaa
caagaacaacaaccggaatatgagatcaacctgctgatgtacatgtattttgttgttttc
atcatatttggagccttcttcacactcaatctctttattggtgtcatcatagacaatttc
aatcagcaaaagaaaaagtttggaggtcaagacatcttcatgactgaggaacagaagaaa
tactacaatgccatgaaaaagctgggatccaagaaaccacaaaaacctatacctagacca
tcaaacaaaattcaaggatacatctttgacttcaccacaaaccaagcattcgatattgta
ataatggttctgatatggcttaatatggtagccatgatggtggaaactgatggtcagtcg
gaacaaaaggaaaatgttctctactggattaatttcgtgttcattatcatcttctctgga
gagtgtttattgaagatgatcgcacttcgccagtactttttcacaaatggttggaatgtg
tttgatttcatcgtcgtcatcctgtcaatcattggtgtgtctctctcaaaggtgatagag
aagtattttgtttcgccaaccttgttcagagtcatccgattggctcggattggccgcgtc
ctccgccttattaaaagtgccaaaggaatccgcacgctcctgtttgccttgatgatgtca
cttcctgctttgttcaacattggtctcttgctcttcttggtgatgtttatctatgccatc
tttggcatgtcaaactttgcttatgtcaagaaagaagaaggcattgatgaccttttcaat
tttgagacatttggcaacagcatgatctgtttgttccagatcaccacctcagcagggtgg
gatggcctacttgctcccattcttaacaaacacgaagatgattgtgacagtttcacggag
catcctggcagtcgtgttaagggagactgtgggaatccttctgtggggatcgccttcttt
gtgagctacatcatcatctgtttcctgattgtagtgaatatgtacatcgcagttatccta
gaaaactttggtgtggccactgaggagagcacagatccactaagtgaggatgatttcgaa
acgttttatgaggtctgggaaaggtttgatcctcatgcatcacagttcatagtgtacaat
acactgtcagaatttgcagatgctctggacccaccattacgcatagccaagcctaacaag
atggaactgatctctatggatctacccatggtgagcggtgagcgcattcactgcctggac
atcctgtttgcattcacaaagcgtgttctgggcgagggtggggagatggacatcctaagg
gcgcagatggaggagcgcttcatggcctccaatccttccaaagtgtcctacgaacccatc
actactaccctccgtcgcaaacaggaggacacatcggccaccatcatccagagagcattt
agagagtatgcaaagagacagggtgccacaaagccatttgtcggttccagtgattacatt
gaaaaggataaaacatacaatgacaaagaggatgttgtcacagacaagctcaaagacatt
tccagcgctgataaaagtgaactgacaccttcaacagcctctcaaatttcatctaacagt
gtggcaacaaatggagcaaacaaatatgaaaaagacaaaagtgagaaggaagttgagggc
aaagatgtcagagagcaatatacgtaa
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