Epinephelus lanceolatus (giant grouper): 117252569
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Entry
117252569 CDS
T07331
Symbol
grin1b
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1b
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
ely
Epinephelus lanceolatus (giant grouper)
Pathway
ely04020
Calcium signaling pathway
ely04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117252569 (grin1b)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117252569 (grin1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ely04040
]
117252569 (grin1b)
Ion channels [BR:
ely04040
]
Ligand-gated channels
Glutamate (ionotropic)
117252569 (grin1b)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
SIP
DUF6724
Cas_APE2256
Motif
Other DBs
NCBI-GeneID:
117252569
NCBI-ProteinID:
XP_033475485
LinkDB
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Position
4:complement(6022041..6104584)
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AA seq
910 aa
AA seq
DB search
MELLRGVLLLTVLQCCSVARGGCEPRLVNIGAVLSQKRYEQVFKEAVSQANTLYGKEKFK
MNAISVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVV
GLTTRMSIYSDKSIHLSFLRTVPPYSHQAQVWFDLMREFRWNHIILIVSDDHEGRAAQKR
LETLLEERETKTKNRNYENLDQQNFDFRRTPKAEKVLLFSPDTNLTALLLEAKDLEARVI
ILSASEDEAAAVYKAARQLNMTGSGYVWLVGEREMTGKALSEAPDGLLGLQLINGKNESA
HIADAVAVVAQSLQELFEKENITEPPRGCVGNTNIWRTGPLFKRVLMSSKYPDGLTGRIE
FNDDGDRRFATYSILNYQQKPGRLVQVGVFNGSQIVTIHQEPFVYVKPTKTDGTCKEEYT
VNGVLIKKVICTGPNGTIPGQPIVPQCCYGFCIDLLIKLAMSMNFTYEVHLVADGKFGTQ
ERVNNSNKKEWNGMMGELLGGLADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIP
RSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAM
WFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGI
NDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQAVRDNKLH
AFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLAILSSHENGFMED
LDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQ
MQLAFAAVNVWRKNLQDRKSRAEPESKPSFRSITSTSDLKRRRASGDATPYPTDITGQLN
LSDPSVSTVV
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggagctccttcgtggcgtgctcctcctcaccgtgctgcagtgctgttctgtggcccgt
ggcggctgtgagcctcggctggtgaacatcggcgccgtgttgagtcagaagcgctatgag
caggtgttcaaggaggcggtgagccaggccaacacgctgtacgggaaggagaagttcaag
atgaacgccatctctgtcactcacaaacccaacgccatccagatggctctgtccgtctgc
gaggacctcatctccaaccaggtgtatgcgatcctggtcagtcaccctcctcagtccaac
gaccacctgactcctacacctgtctcctacactgccggtttctaccggatccctgtggtc
ggcctgacaacacgcatgtccatctactctgacaagagcatccacctgtcgttcctgagg
acggtgcctccgtactcccaccaggctcaggtctggttcgacctgatgagagagttcagg
tggaatcacatcatcctcatcgtcagcgacgaccacgaaggccgagcggctcagaagaga
ctggagacactgctggaggagagggagaccaagactaaaaacaggaactatgaaaacctc
gaccaacagaactttgacttcaggagaacacccaaggcagagaaggtgctgctgttcagt
ccagacaccaacctgacggctctgctgctggaggccaaagacctggaggcccgagtcatc
atcctctctgccagcgaggatgaagcggcggcggtgtataaggcggcgcggcagctcaac
atgaccggctctggttacgtgtggctggtcggggagagagagatgacgggcaaagcgctg
agtgaagctccagacggcctgctgggcctccagctgattaacggtaagaacgagtcggct
cacatcgcggacgccgtggcggtggtggctcagtctctgcaggagctgtttgagaaggag
aacatcacagagccgccacggggctgcgtgggaaacaccaacatctggaggaccggaccg
ctttttaaacgagtgctgatgtcgtccaagtaccctgacggtctgacaggacggatcgag
tttaacgacgacggcgaccgacgcttcgccacttacagcatcctaaactaccaacagaag
ccaggtcgcctcgtccaggtaggagtcttcaatggatcacagattgtgacgatccatcag
gagccgtttgtttacgtgaagccaacaaagactgacgggacgtgtaaagaagagtacacc
gtcaatggagtcttaatcaagaaggtgatctgtactggacccaatgggaccataccaggt
cagcccatcgtccctcagtgttgctacggtttctgcatcgacctgctcatcaagctggcg
atgagcatgaacttcacctacgaggttcacctggtggctgatgggaaatttggcacgcag
gagcgagtcaacaacagtaacaagaaggagtggaacgggatgatgggggagctgctggga
ggtctggccgacatgatcgtcgctcccctcaccatcaacaacgagcgcgctcagtacatc
gagttctccaaacccttcaaataccagggactcaccatcctcgtcaagaaggaaatccct
cgcagcactctggattcattcatgcagccgttccagagcacactgtggctgttagtcggt
ctgtcggtccacgtggtggcagtgatgctttacctattagaccggttcagcccgtttgga
aggtttaaagtgaacagtgaagaagaagaagaagacgccctcaccctgtcctctgccatg
tggttctcatggggagtactgttaaactctgggataggagaaggagctcccaggagtttc
tcagcgaggattctgggtatggtgtgggcaggtttcgctatgatcatcgtagcgtcgtat
actgccaacctggcagccttccttgtgttggaccggcctgaggagcgcatcactggcatc
aatgaccccaggctgcgtaacccatcagataagttcatctacgccacagtgaagcagagt
tcggtggatatctacttcagacggcaggtggagctgagcaccatgtaccggcacatggag
aaacacaactatgagagcgctgctgaggccattcaggccgtcagagacaataaacttcat
gcctttatctgggacagcgctgtgttggagttcgaggcgtcacagaagtgcgatctagtg
acgacaggagagctgttctttcgctccggattcgggattggaatgaggaaagacagtccg
tggaagcagaatgtttctttggccattctcagctctcatgagaatggcttcatggaggat
ctagacaagacatgggttcgataccaggagtgtgactccaggagcaacgcccccgctacc
ctaaccttcgagaacatggcaggtgtgttcatgctggttgccgggggcatcgtcgccggg
atcttcctcatctttatcgagatcgcttacaaacggcacaaagacgctcggaggaaacag
atgcagctggccttcgctgctgtgaacgtctggaggaagaacctgcaggataggaaaagt
agagcagagcccgagtccaaaccctcttttaggtccatcacttcgacctccgacctcaaa
cgccgtagggcctccggggacgccacgccgtacccgactgacatcaccggacagctcaac
ctatcagatccctccgtcagcacggtggtctga
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