Epinephelus lanceolatus (giant grouper): 117266110
Help
Entry
117266110 CDS
T07331
Symbol
cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ely03016
]
117266110 (cdkal1)
Enzymes [BR:
ely01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
117266110 (cdkal1)
Transfer RNA biogenesis [BR:
ely03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
117266110 (cdkal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Glyco_hydro_120_ins
Motif
Other DBs
NCBI-GeneID:
117266110
NCBI-ProteinID:
XP_033496958
LinkDB
All DBs
Position
14:27122062..27410669
Genome browser
AA seq
565 aa
AA seq
DB search
MPSACDSLIEDIEDMVSSSDPTPHERQSARKSIIPRSRKKKELLSHEELQADSVIPGTQK
IWMKTWGCSHNNSDGEYMAGQLAASGYKMTDDPADADLWVLNSCTVKNPAEDHFRNSIKK
AQEQQKKVVVAGCVPQAQPRMDYLKGLSIIGVQQIDRVVEVVDEAVKGHSVRLLGQKKDG
GRRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVERARQS
FQEGVCELWLTSEDTGAYGRDIGTDLPTLLWKLVEEIPEGAMLRLGMTNPPYILEHLEEM
AKILNHPRVYAFLHVPVQSASDSVLMDMKREYCIDDFKKVVDFLKERVPGVTIATDIICG
FPGETDEDFQETVDLVKHYRFPSLFINQFYPRPGTPAAKMEQVPAHVKKQRTKVLSQLFH
SYNPYDHEVGERQNVLVTEESFDAQYYVAHNKFYEQVLVPKRAEFKGKMIEVDIYEAGKH
FLKGRPVEDSQPFTPSIAAPLQKGEVSGLMQEQKANGIHGPASSSTSSSVLLFGSYSLDR
EAVKKLGIGLTLVAAILAFIIEKLY
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccgcctgtgactctctgattgaagacatcgaggacatggtgtcctctagtgac
cccactcctcacgagagacagtctgccagaaagagtatcataccaaggtccaggaagaaa
aaagagcttctgagccatgaggagctccaagctgacagtgtgatccctggcacccaaaaa
atctggatgaaaacgtggggctgcagtcataacaactcagatggagagtacatggccgga
cagctagctgccagtggatacaagatgacagatgacccagcagatgcagacctgtgggtg
ctcaacagctgcaccgtgaaaaaccctgcggaggaccacttcagaaattcaatcaaaaaa
gcccaggagcagcagaaaaaggtggtggtagcaggttgtgtcccgcaggctcagccacgg
atggactacctcaaaggactcagcatcattggggtccaacagattgatcgagtggtggaa
gtggtggatgaggccgttaaaggccactcagtccgtctgttgggtcagaagaaagatgga
ggccggaggctcggaggagccagactggacctgcccaagatcaggaagaaccctctcatt
gaaatcatctccattaacactgggtgtctgaatgcatgtacctactgtaagactaagcat
gccagaggagacctggccagctatcccatcgaggagcttgtggagagagccaggcaatct
ttccaggagggagtgtgtgagctctggttgaccagtgaagacacaggagcatacggtaga
gacatagggacagacctgcccacactactgtggaaattggtggaagaaattcctgaagga
gccatgttgaggctgggaatgaccaacccaccatatatcctggaacacctagaggagatg
gctaagatattgaatcatccacgagtctatgccttcctccatgtccctgtgcagtcggcc
tcagacagcgtcctgatggacatgaagagagagtattgcatcgatgacttcaaaaaagtg
gtggacttcctcaaagagagggtcccaggcgtaaccattgccacagatataatctgcggt
tttcctggtgagacggatgaagacttccaagagacagtagacttggtgaagcactaccga
ttccccagtcttttcatcaaccagttctaccccagaccgggtacacctgcagccaagatg
gagcaagtacctgcacatgtgaagaagcagaggactaaagtgctgtcacaactcttccac
tcctacaacccctacgaccacgaggtcggggagaggcagaatgtgttggtgacagaggag
tcatttgatgcccaatactatgtggcccataacaagttctatgaacaggtgctggtgcct
aagagggctgagttcaaagggaagatgattgaggtggacatctacgaggcaggaaaacac
ttcctgaaaggccggccagtggaagacagtcagcccttcactccctccattgctgcacca
cttcagaaaggagaggtgtctggcctgatgcaggaacagaaggccaatggcatccatggt
cctgcttcctcttcgacgtcttcatctgttttgttgttcggctcgtacagtctggacagg
gaagcagtgaagaagctgggaatcgggctcaccttggtggcagccatcttggccttcatc
atagagaaactgtactga
DBGET
integrated database retrieval system
