Epinephelus lanceolatus (giant grouper): 117269055
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Entry
117269055 CDS
T07331
Symbol
scn4ab
Name
(RefSeq) sodium channel protein type 4 subunit alpha B isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
ely
Epinephelus lanceolatus (giant grouper)
Brite
KEGG Orthology (KO) [BR:
ely00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ely04040
]
117269055 (scn4ab)
Ion channels [BR:
ely04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
117269055 (scn4ab)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
GPHH
IQ
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
117269055
NCBI-ProteinID:
XP_033501770
LinkDB
All DBs
Position
16:complement(42347481..42461466)
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AA seq
1776 aa
AA seq
DB search
MAHLLPPVGSEVFRRFTPASLEEIQRCHEVEEKERQRRKEKNIEIADEDLPKPASDLEAG
KPLPFIYGEPPPELLNTPLEELDPFYQSQKTFIVLAKGNVIFRFNAEPACYLLSPFNPLR
TAAIRILVHSLFSLFIMVTILTNCVFMTMSDPPPWSKTVEYVFTFIYTFEATVKIMARGF
CVGGFTFLKDPWNWLDFMVISMAYLTEFIDLGNVSVLRTFRVLRALKTITVIPGLKTIVG
ALIQSVKKLGDVMILTLFCLSVFALVGLQLFMGNLRQKCVLIPPLSLSNYTSDINLNVSY
HGNNTGSSEDFDYFEFINNPENYYHLPGHIDALLCGNSSDAGACPEGYLCLKAGRNPNYG
YTSYDTFGWAFLSLVRLMTQDFWENLFQLTLRAAGKTYMIFFVVIIFLGSFYLINLILAV
VAMAYAEQNEATIAEAKQKEEEYAQILELLKKREKETKLLLQQAACRAELSEKQHSAPQE
KNSSAETKTHEQEHTAMEEFADEQRPCPPCWYAFANIFLKWNCCGCWRWVKRGLYIFVMD
PFVDLGITICIVLNTVFMAMEHYPMTEEFEELLSVGNLVFTGIFTAEMVLKLLAMDPYYY
FQVGWNIFDSIIVTMSLVELGLANVQGLSVLRSFRLMRVFKLAKSWPTLNMLIKIIGNSV
GALGNLTLVLAIIVFIFAVVGMQLFGKNYKDCVCRISLDCELPRWHMNDFFHSFLVIMRV
LYGEWIELMWDCMEVSGQAMCLIVFMLVLVIGNLVVLNLFLALLLSSFSGDNLAAPEDEG
ENNLQIAINRISRAVSWMKTWILEHIWTLMGKKVHVDPDHLAVDSDNKTKELLALTFVTS
DEPLSEVKSLSCDRGNLSSNYHNIACLRVPIAEAESDFETPDDDDNDDDDEDEDEEEEEM
HSQCDKSSVCSTIQKLPEVQDDEDDEDSNTNTPVDCCSEKCYHRCPFLDIDTSQGRGKVW
SNIRRTCFSIVEHNYFETFIIFMILMSSGALAFEDIYLEQRRVIKMVLEYADQVFTYVFV
VEMVLKWVAYGFKTYFTNAWCWLDFLIVDVSLVSLTANVLGYSELGAIKSLRTLRALRPL
RALSRFEGMRVVVNALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYYCFNETSQEV
FPPEDVNNRTECLALIADNSTEVRWKNLKVNYDNVGMGYLSLLQVATFKGWMDIMYAAVD
SRDVESQPMYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKAKLGGKDIFMTEE
QKKYYNAMKKLGSKKPQKPVPRPENKFQGLVFDLVTTQFFDIFIMVLICLNMVTMMVETD
EQSQEKEIILYWVNLVFIIIFTSECVLKLTALRQHYFAVGWNIFDFVVVILSIVGLLLAD
IIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFI
FSIFGMSNFAYVRKEAMIDDMFNFETFGNSMICLFMITTSAGWDGLLNPIMNTPPDCDPD
LENPGSLVRGDCGSPGIGIIFFTTYIIMSFLVVVNMYIAIILENFNVATEESADPLCEDD
FEMFYETWEKFDPDASQFIQYSKLSDFCDALKDPLRIPKPNTIRLIHMDLPLVPGDKIHC
LDILLALTAQVLGDSGEMDTLKASMEEKFMANNPSKVSYEPISSTLRRKQEEVAATVIQR
AYRKHLLQRTVKLASYKYREKEGQRDVSPPETGGLLCKRISQLYGDSQETDEPVSGASGE
VRPSRVELQSEFLLHAAPPLNTSESVQNENLRESVV
NT seq
5331 nt
NT seq
+upstream
nt +downstream
nt
atggcacatctgctgccccctgtcggttcagaggtcttcagacgcttcacaccggcctcg
ctggaagaaatccaacgatgtcatgaagtcgaggagaaggagagacaaagaagaaaggaa
aagaacatagagatcgcagatgaagatcttcctaaaccagccagtgacctggaggctggg
aagcccctccccttcatctatggagaaccgccccctgagcttctcaacaccccattagag
gagctggatcctttctaccaatcacagaagacgttcatcgtgctcgccaaaggaaacgtc
atcttccggtttaacgctgaacccgcctgttacctgttgagtcccttcaaccctctgcgc
accgccgccatcaggatcctggttcattctttattcagtttgttcatcatggtgacgatt
ctgaccaactgtgtgttcatgaccatgagcgacccgccgccatggagcaagactgtggag
tatgtgtttaccttcatctatacatttgaagcaacagttaaaatcatggcccgaggattc
tgtgtcggaggtttcaccttcctcaaagacccctggaactggctggacttcatggtcatc
agcatggcgtacctgacagagttcatagatttgggaaacgtctctgtgttgaggacgttc
agagttcttcgagctctgaagacaatcacagtcattcccggtctgaagacgattgtcgga
gctctcatccaatcagtgaagaagctgggtgatgtcatgattctgacactgttctgcctc
agtgtcttcgctctggttggtctgcagctctttatgggaaacctgcggcaaaaatgcgtc
ctaatacctccgctgtcgcttagcaactacacgtctgacatcaacctaaacgtcagttac
catggaaacaatacaggaagcagtgaggactttgattactttgagttcatcaacaatcca
gagaactattaccaccttcctggtcatatcgatgctctgttgtgtggaaacagttctgat
gccggggcctgtccggagggttacctctgtctaaaggcggggagaaacccaaactacgga
tacaccagctatgacacatttgggtgggcgttcctgtctctggtccgactgatgacccag
gacttctgggaaaacctcttccagctgacgctgagagcagcaggtaaaacttacatgatc
ttcttcgtggtcatcatcttcctgggctcgttctacctcattaacctcattctggctgtg
gtcgccatggcgtacgccgagcagaatgaggccaccatagccgaggccaaacagaaggaa
gaagagtacgctcagatcctggagttgctgaagaagagggagaaagagactaaactgttg
ttacagcaggcggcctgcagggcggagctctcggagaaacaacactcagcaccacaggag
aagaactcatctgcagaaacaaagacccacgagcaagaacacactgccatggaagagttt
gcagatgaacagaggccctgtcctccatgttggtacgccttcgccaacatcttcctgaag
tggaattgttgtggctgttggcggtgggtcaaacggggcctctacatcttcgtcatggac
ccttttgtcgacctcggcatcaccatctgtatcgtcctcaacactgtcttcatggcaatg
gagcattatccaatgacagaggagtttgaggagcttctgagcgtgggaaatttggtcttc
acggggatcttcacagctgagatggtcctcaaacttctagccatggacccatactactac
ttccaggtaggctggaacatctttgacagcatcatcgtcaccatgagtctggtggaactg
ggattggctaatgttcagggcctgtctgtgctgcgctccttccgattgatgcgagtgttc
aagctggccaagtcatggccaaccctcaacatgttgataaagatcattgggaactcagtg
ggggctctggggaacctaaccctggtgttggccatcatcgtcttcatcttcgccgtcgtt
ggcatgcaactgttcggaaagaactacaaagactgcgtctgtcgcatctcactcgactgc
gagcttcctcgctggcacatgaacgatttcttccactccttccttgttatcatgagggtc
ctgtatggagagtggattgagctcatgtgggactgcatggaggtctcaggtcaggccatg
tgtctgattgtcttcatgttagtcctcgtcattggaaacctggtggtcctgaacctgttc
ctggccttgttgctgagctctttcagcggtgataatctggcagctccagaggacgaagga
gaaaacaacttgcagattgccatcaacaggatcagtcgagccgtgtcctggatgaagacc
tggattttggaacatatctggactttaatgggaaagaaggtccatgttgacccagaccac
ctggcggtcgacagtgacaacaagacgaaggagcttttggctttgacctttgtgacctca
gacgagccactgtcagaggtcaagtccctcagctgtgaccgtggcaacctgagcagcaac
tatcacaacatcgcctgcctgagggtccccatcgccgaggccgagtctgacttcgagacg
cctgatgatgatgataatgatgatgatgacgaagatgaagacgaggaggaggaagaaatg
cactcacagtgtgacaagtcgtcggtctgcagcacaatacaaaaacttcctgaagttcag
gatgacgaagacgatgaagactctaatacaaacacacctgtggactgctgcagtgaaaag
tgttaccaccgctgtccattcctggacatagacacatcccagggcagagggaaggtgtgg
tctaacatcagaagaacctgtttctccattgtagaacacaactactttgagaccttcatc
atctttatgattctgatgagcagtggagctctggcctttgaggacatctacctggagcag
cgtcgggtcataaagatggttctggagtatgcagaccaggtgttcacctacgtgttcgtg
gtggagatggttctcaagtgggtcgcctatggattcaagacctacttcaccaacgcctgg
tgctggctggacttccttattgtggacgtgtctctggtgtctctgacagcaaacgtcctt
ggatactctgagctgggagccatcaagtctctgaggacactgagagctctgaggcccctg
agggccctgtcgcgcttcgagggcatgagggtggtggtgaacgccctggtcggagcgatc
ccatccatcttcaacgtgctgctcgtgtgtctgatcttctggctgatcttcagcatcatg
ggcgtcaatctgttcgcaggaaagttttattactgtttcaatgagacgtcccaggaagtg
tttccccctgaggatgtcaacaacaggacagagtgtctcgcgctgatcgcagacaactcc
accgaggtccgctggaagaacttaaaggtcaactacgacaatgttgggatgggctacctg
tcgctgctgcaggtggccacgtttaaaggatggatggacatcatgtacgccgccgtggac
tccagagacgtggagtcccagccgatgtacgaggacaacttgtacatgtacctttacttt
gtcatcttcatcatcttcggctccttcttcactctcaacctcttcatcggagtcatcatc
gacaacttcaaccagcagaaagcaaagttgggaggaaaagatattttcatgacggaggag
cagaagaaatattacaacgccatgaagaaactgggctcaaagaaacctcagaaacctgtt
ccccgccctgagaataagttccagggtctggtctttgacctggtcaccacacagttcttc
gacatcttcatcatggtgttgatctgtctcaacatggtgaccatgatggtggagacagat
gagcagagccaggagaaagaaatcattctctattgggtcaaccttgtcttcatcatcatc
ttcacctcagagtgcgttctcaagttgactgcactcaggcagcactacttcgctgtcggc
tggaacatctttgactttgtggtcgtcatcctgtccatcgtaggccttctccttgctgac
atcatagagaagtatttcgtctcgcccacactcttccgtgtaatccgattggctcgtatc
ggtcgagtccttcgactcattcgtggagcaaaggggatccggacactgctgttcgccctg
atgatgtcacttcctgccctcttcaacattggcctcctcctcttcctcatcatgtttatc
ttctccatcttcggcatgtcgaactttgcgtacgtgaggaaggaggccatgatcgatgac
atgtttaactttgagacgtttgggaacagcatgatctgcttgtttatgattaccacgtca
gccggatgggacggtctgctgaatcccatcatgaacacgccgccggactgtgaccctgac
ttagaaaaccctggatcgctggtcagaggggactgcggcagcccgggcatcggcatcatc
ttcttcaccacctacatcatcatgtccttcctggtggtggtcaacatgtacatcgccatc
atcctggagaacttcaatgtggcgacagaggagagcgctgacccgctgtgtgaggatgac
tttgagatgttttatgaaacctgggagaagtttgaccccgacgcctcccagttcatccaa
tacagtaagctgtcagatttctgcgacgctctgaaggatcctctgaggatccccaaaccc
aacaccatccgactgatccacatggatctacctctggttcctggagacaaaatccactgt
ctggacatcctgctggcgctcacggcacaggttttaggtgattcaggagagatggacact
ctgaaggccagcatggaggagaagttcatggccaacaatccttccaaggtgtcatatgaa
ccaatcagcagcactctgcggaggaaacaggaagaagtggcggcaacagtgatccagaga
gcgtacaggaaacatcttctgcagcggacagtcaaactggcatcctacaaatacagagag
aaggaggggcagcgagatgtctcgccgcctgagacaggaggacttctctgtaaacgaatc
agtcagctgtacggagacagccaggagacagatgagcctgtctcaggtgcctcgggtgag
gtacgtccctcccgggtggagcttcagagtgagtttctcctccatgctgcgcctccctta
aacacctctgagtctgtacaaaatgagaacctgagggagtcagtggtgtga
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integrated database retrieval system
