Elizabethkingia sp. 2-6: FCS00_07595
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Entry
FCS00_07595 CDS
T06039
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
elz
Elizabethkingia sp. 2-6
Brite
KEGG Orthology (KO) [BR:
elz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
elz03009
]
FCS00_07595 (rimO)
Enzymes [BR:
elz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FCS00_07595 (rimO)
Ribosome biogenesis [BR:
elz03009
]
Prokaryotic type
ribosomal protein modification factors
FCS00_07595 (rimO)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
TMF_TATA_bd
Motif
Other DBs
NCBI-ProteinID:
QCO46246
UniProt:
A0A4P8E5Z6
LinkDB
All DBs
Position
complement(1650546..1651850)
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AA seq
434 aa
AA seq
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MRTKSSNKKKINIVTLGCSKNVYDSEVLMGQLKANGKEVVHEDKGDIVVINTCGFIDNAK
EESINTILEYVDLKNQGAVEKVFVTGCLSERYKPDLIREIPDVDQYFGTRDLPILLKHLG
ADYRHELVGERLTTTPRHYAYLKISEGCDRPCTFCAIPLMRGNHISTPIENLVKEAENLA
KNGVKELILIAQDLTFYGLDIYKKRALGDLLKELVKVEGIEWIRLHYAFPTGFPEDVLEI
IKEEPKICNYIDIPLQHINNDVLKRMKRGTTFEKTNALLDKFREKVPGMAIRTTLIVGFP
GETEEHFEELKNWVRDQRFDRLGCFTYSHEENTGAFIYEDDVPAEVKERRVEEIMEVQQQ
ISYEINQEKVGKTFKCLFDRKEGNYFIGRTEFDSPDVDNTVLVPAENTYISVGEFVNVKI
TSADDFDLYGEVVD
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgcggacaaaatcttctaataaaaagaaaattaatattgtaacactcgggtgttccaag
aatgtatatgactccgaagtattgatggggcagcttaaagccaatggcaaagaggtagtt
catgaagacaagggagatattgttgtaattaatacctgtggatttatagataatgctaaa
gaagagagtattaatacaattctggaatatgtagatcttaaaaatcagggtgctgtagaa
aaagttttcgttacaggctgtctttccgaaagatataagccggatttgataagagaaatt
ccggatgtggatcagtatttcggaacccgcgatctgccaattttgctaaaacatttagga
gcagattaccgtcatgaactggtaggagagcgtcttactacaacgccaagacattatgct
taccttaaaatttctgaaggctgcgacagaccgtgtactttctgtgcaatacctttaatg
agaggtaatcacatttctacgccgatagaaaatctggtaaaagaagctgagaatttggct
aagaatggtgtgaaagaattaattcttatcgctcaggatcttacattctacggattagat
atttataaaaaacgtgcattaggtgatcttctgaaagagcttgtaaaagtagaaggaatt
gagtggattcgtctgcactatgctttccctacaggtttcccggaagatgtattggagatt
ataaaagaagaacctaaaatctgtaactatatagatattccgcttcagcatattaataat
gatgttctaaagcgtatgaaacgtggaactactttcgagaaaaccaatgctttattggat
aagttccgtgagaaagttccgggaatggctatcagaacaactcttatcgtaggtttcccc
ggtgaaactgaagagcattttgaagaattgaagaactgggtaagagatcagcgttttgac
agattaggctgttttacctattctcacgaagaaaatacaggtgcatttatttatgaagat
gatgttcctgcagaagttaaagaacgccgtgtagaagaaattatggaagttcagcagcaa
atttcatatgagataaatcaggaaaaagttggtaagaccttcaaatgtctgttcgataga
aaagaaggaaactactttatcggaagaacagaattcgattctccggatgtagataacact
gttttggtacctgctgaaaatacgtatatcagtgtaggagagtttgttaatgttaaaatt
acttctgccgacgatttcgatttatacggagaagttgtagactaa
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