Eleginops maclovinus (Patagonian blennie): 134862374
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Entry
134862374 CDS
T09869
Symbol
cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
emac03016
]
134862374 (cdkal1)
Enzymes [BR:
emac01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
134862374 (cdkal1)
Transfer RNA biogenesis [BR:
emac03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
134862374 (cdkal1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TraT
Motif
Other DBs
NCBI-GeneID:
134862374
NCBI-ProteinID:
XP_063736340
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Position
3:15408287..15610568
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AA seq
586 aa
AA seq
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MRLGYSERSEENKTFSISWSIMPSACDSLIDDIEDMVSSSDPTPLERQSARKSIMPRSRK
KKEPLNQEELQTDSLIPGTQKIWMKTWGCSHNNSDGEYMAGQLAASGYKMTDDPTDADLW
VLNSCTVKNPAEDHFRNSIRKAQEQQKKVVVAGCVPQAQPRMDYLKGLSIIGVQQIDRVV
EVVDEAVKGHSVRLLGQKKDGGRRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTK
HARGDLASYPIEELVERARQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWRLVEEIPE
GAMLRLGMTNPPYILEHLEEMAKILNHPRVYGFLHVPVQSASDSVLMDMKREYCIDDFKK
VVDFLKEKVPGVTIATDLICGFPGETEKDFQETVELVKLYRFPSLFINQFYPRPGTPAAK
MEQVPAHVKKQRTKELSQLFKSYNPYDHEVGERQHVLVTEESFDAQYYVSHNKFYEQVLV
PMRAEFKGKMIEVDIYEAGKHFLKGRPVEDSKPFTPSIAAPLQKGEVSGMTQEPMANGFQ
GPSSMSSPSHLLIGSYSVDREVLKKLIIGVTLIAAILSYIVEKLYT
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgcggttgggttacagtgaaaggtcagaagaaaataaaacattcagcatcagctggagc
atcatgccgtccgcctgtgactcgctgattgacgacattgaggacatggtgtcctctagc
gaccccacacctcttgagagacagtctgctagaaagagcatcatgccgaggtccaggaag
aaaaaagaacctctgaaccaggaggagctgcaaactgacagtttaatccctggcacccaa
aaaatctggatgaaaacatggggctgcagtcataacaactcagatggagagtacatggcc
ggacagttagctgccagcggatacaagatgacagatgacccaacagacgcagacctgtgg
gtgctcaacagctgtaccgtgaaaaacccagcagaggaccacttcaggaactcaatcaga
aaagcccaggaacaacagaagaaggtggtagtagcaggttgtgttccccaggctcagcca
cggatggactacctcaaaggactcagcatcatcggggtccagcagatcgatcgtgtggtg
gaagtagtggacgaggcagttaaaggccactcagttcgtctgctgggtcagaagaaagat
ggaggccgcaggctcggaggtgctagactggatctgccaaagatcaggaagaaccctctc
attgagatcatctccattaacacagggtgtttgaatgcgtgtacctactgtaagactaaa
catgccagaggagacctggccagctatcccatcgaggagctagtggagagagccagacag
tctttccaggagggagtgtgtgagatctggttgaccagtgaagacacaggtgcttacggt
agagacataggcacagacctgcccacattgctgtggagattggtggaagagattcctgaa
ggagccatgctgaggctgggtatgaccaaccccccgtatatcctggaacacctagaggag
atggctaagatattgaatcatccgcgcgtctatggcttcctccatgttcctgtgcagtcg
gcctcagacagcgttctgatggacatgaagagagagtattgcatcgatgacttcaagaag
gtggtggacttcctcaaagagaaggtcccgggtgtgaccattgccacagatttaatctgc
ggttttcctggtgagacagaaaaagacttccaagagacggtagaattggtgaagctctac
cgattccccagtctgttcatcaaccagttttaccccaggcccggtacacctgccgccaag
atggagcaagtaccagcgcatgtgaaaaagcagaggactaaagagctgtctcaactcttc
aaatcttacaacccctatgaccacgaggtaggggagaggcaacatgtgctggtgacggag
gagtcatttgacgcccaatactatgtgtctcacaacaagttctatgaacaggtgctggtg
cctatgagggctgagtttaaaggaaagatgatcgaggtggacatttatgaggcaggaaaa
cacttcctgaaaggccgaccagtagaagacagcaagcccttcactccctccattgctgcc
ccactgcagaaaggagaggtgtctggcatgacgcaggaaccgatggctaatggcttccaa
ggtccctcttcaatgtcttctccatctcatctgttgatcggttcctacagtgtggacagg
gaagtattgaaaaagctgataatcggggtcaccctgatagcagccatcttgtcttatatc
gtagagaaactgtacacatag
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