Eleginops maclovinus (Patagonian blennie): 134870047
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Entry
134870047 CDS
T09869
Symbol
vcam1b
Name
(RefSeq) vascular cell adhesion protein 1b
KO
K06527
vascular cell adhesion molecule 1
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
134870047 (vcam1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
emac04090
]
134870047 (vcam1b)
04091 Lectins [BR:
emac04091
]
134870047 (vcam1b)
CD molecules [BR:
emac04090
]
Proteins
134870047 (vcam1b)
Lectins [BR:
emac04091
]
I-type lectins (Siglecs)
134870047 (vcam1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
Ig_C17orf99
ICAM1_3_5_D2
ICAM_N
Izumo-Ig
Motif
Other DBs
NCBI-GeneID:
134870047
NCBI-ProteinID:
XP_063748114
LinkDB
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Position
9:28531495..28546776
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AA seq
814 aa
AA seq
DB search
MSPLSVCRISVLSAVLLMSWCIQGLHVDVLPSKPLFRLGQRQQLFCRVQDCPTKPSVSWS
LLEDQPLAASISSNHTGSTVTFDPVLIEHERPILCRVSCGGRTIQTLSNVRVYSFPSAPQ
IGGQDRLRMGAESFLTCQVSHVYPPERLTLIWLQGDTVRESIMGDPGATTLRSEYRPQYG
DWGRTLSCRATLDLEDLPTEDRTQETEVLLDPLLAPVVTVFPTSVLLMAGAQLNLSCTVK
GHPEPELSWSFRSADGQVVALGSSGQLVIDQVRLSDDGRYDCEAKNSEGKDIAGVEVRVH
APPTNISLSVSPGEQVLEGQQVTFTCQSDGAPPPVLVLRREGEELQRTDPASSSVSFSLS
SARFQDSASYKCEASNQYGAQLVTRSLTVTAHPMQVELSPPVPAADRGSDLLLICRASGC
LQPPTFTWRRTDNNHILFQSKNQNQNQSLLNLQDLDLQDQGGYRCAAECDSVIRTADTQV
HVYSFPSNPVLEVPGPVLLGQDVILRCNVDGVFSANQMRILWLSGNRTLMSKSIRSLDSL
KNVSSVLQYQVLEDQPILTCMAELLTEDGDIWRSRRTSVALQMHYPSRGTSLSVSPGEQV
LEGQQVTFTCQSDGAPPPMLVLRREGEELQRTDPASSSSLSFSLSSARFQDSASYHCEAS
NQYGAQLVTRSITVTAPPRNTSVLVLPSTMVQEGQTITVSCHTVCFPPAAISLKNLANGT
ELYSSNGTFLLVNVMARDSGMYQVNVTNELGFQVRVFSIRVRERNSSPPSLGSVLIPLLC
SAVGLAAAALLLDYLKRSRKKGFYQLPQTAPPSA
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgctgtctgtctgcaggatctctgttctctcagctgtgctgctgatgtcgtgg
tgcattcagggacttcatgtggacgtgttgcccagcaagcctctcttccggctcgggcag
cggcagcagctgttttgccgggtgcaggactgtcccacgaagccgagcgtgtcgtggtcc
ctgctggaagaccagcccctggcggcctccatcagctccaaccacaccggctccaccgtg
accttcgaccccgtcctgattgagcacgaaagacccatactgtgccgagtcagctgtggg
gggaggacaattcagaccctcagcaacgtgcgcgtctactccttcccatcagcccctcag
ataggtggtcaggaccggctcaggatgggggcggagtctttcctcacctgtcaggtgtct
catgtttaccccccggagaggttgacgctcatctggctgcaaggggacaccgtccgggaa
agcatcatgggagatcccggagccacgacgctgaggtccgagtaccgccctcagtacggg
gactgggggaggaccctgagctgcagggcgacgctggacctggaggacctgccgactgag
gaccggacccaggagaccgaggtcctgcttgacccgctcttagctcctgtggtgacggta
ttccccacctctgtcctgctgatggccggcgctcagctcaacctctcctgcaccgtgaag
ggacacccggagccggagctcagctggagcttcaggtctgcagatggacaggtggtggcg
ctcggttcctctgggcagctggtgatcgatcaggtgaggctgagcgacgacggacgctac
gactgcgaggcgaagaacagcgagggaaaagatatcgccggcgtggaggtcagagttcac
gcgccccccaccaacatctccctgtcagtgagtccaggcgagcaggtgctggaggggcag
caggtgacctttacctgccaatcagatggagccccgccccccgtgctggtgctgaggagg
gagggggaggagcttcagaggacagaccccgcctcctcctctgtctccttcagcctctcc
tccgcccggttccaggactccgcctcctacaagtgtgaagcctccaatcagtacggagct
cagctggtgacccgatccctcaccgtcacagctcaccccatgcaggtggagctcagcccc
ccggtccctgcagcagatcggggttcagatctgttgctcatctgccgggcctctgggtgt
ctccagccccccaccttcacctggaggaggactgacaataaccacatcctcttccagagt
aaaaaccagaaccagaaccagtccctgctcaacctgcaggacctggacctccaggatcag
ggagggtacaggtgtgcggcagagtgtgactccgtgatccggaccgcagacacccaggtc
cacgtctactcgttcccgtccaatccggttctggaagttcccggtcccgtcttgctcggt
caggatgtgatccttcgttgtaacgtcgacggcgtcttctcggccaatcaaatgaggatc
ctgtggctttctgggaacaggacgctgatgtccaagtcgatcaggtccctcgattcctta
aagaacgtctcgtctgttcttcagtaccaggtgctggaggatcagccgattttgacctgc
atggccgagctgctgacagaggacggagacatttggaggtccaggaggacgagcgtcgcc
ctgcagatgcactatccttcgaggggaacctccctgtcagtgagtccaggcgagcaggtg
ctcgaggggcagcaggtgacctttacctgccaatcagatggagccccgccccccatgctg
gtgctgaggagggagggggaggagcttcagaggacagaccccgcctcttcctcctcgctc
tccttcagcctctcctccgcccggttccaggactccgcctcctaccactgtgaagcctcc
aatcagtacggagctcagctggtgacccgatccatcaccgtcacagcgccccccaggaac
acctcggtgctggtcctgccctctacgatggtccaggagggacaaaccatcacagtctcc
tgccacacggtctgtttcccgccggccgccatcagtctgaagaacctggccaatgggacg
gagctatactcgtccaatggcaccttcctgttggtcaacgtgatggccagagactctggg
atgtaccaggtcaacgtgaccaacgagctgggcttccaggtccgagtgttcagcatccga
gtcagagagaggaactccagtcctcccagtcttggcagcgttctcatcccactcctctgc
tccgccgttgggctcgccgccgccgctctgctcctcgactacctgaagagatccaggaag
aaaggtttctatcagctgccgcaaactgccccgccttcagcctga
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