Eleginops maclovinus (Patagonian blennie): 134875705
Help
Entry
134875705 CDS
T09869
Symbol
polr2a
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03020
RNA polymerase
emac03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
134875705 (polr2a)
09124 Replication and repair
03420 Nucleotide excision repair
134875705 (polr2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
emac03021
]
134875705 (polr2a)
03400 DNA repair and recombination proteins [BR:
emac03400
]
134875705 (polr2a)
Enzymes [BR:
emac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
134875705 (polr2a)
Transcription machinery [BR:
emac03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
134875705 (polr2a)
DNA repair and recombination proteins [BR:
emac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
134875705 (polr2a)
BRITE hierarchy
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_R
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
134875705
NCBI-ProteinID:
XP_063756374
LinkDB
All DBs
Position
14:5767030..5779740
Genome browser
AA seq
1966 aa
AA seq
DB search
MHGPPSGDSACPLRTIKRVQFGIISPDELKRMSVTEGGIKYPETTEGGRPKMGGLMDPRQ
GVIERSGRCQTCAGNMTECPGHFGHIELAKPVFHVGFVTKIIKVMRCVCFFCSKLLVDST
NPKIKDILIKSKGQPRKRLTHVYELCKGKNICEGGEEMDNKFGMEQQETEEDITKEKGHG
GCGRYQPRIKRSGLELFAEWKHVNEDSQEKKILLSPERVHEIFKRISDEEDVILGMDPKF
ARPEWMIVTVLPVPPLAVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQSGAAAHV
IAEDVKLLQFHVATMIDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVDFS
ARTVITPDPMLQIDQVGVPRSIAANMTFPELVTPFNIDRLQELVRRGNSQYPGAKYIIRD
NGDRIDLRFHPKPSDLHLQIGYRVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTF
RLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTL
TAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINV
IRTHSTHPDEEDSGPYKHISPGDTKVVVENGELIMGILCKKSLGTSAGSLVHISYLEMGH
DITRLFYSNIQTVINNWLLIEGHSIGIGDSIADAKTYLDIQNTIKKAKQDVIEVIEKAHN
NELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVAGSKGSKINIS
QVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHAMG
GREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDGTVRNSINQVVQLRYGEDGLAGENVE
FQNVATLKPSHKAFEKKFKFDCTNERALRRMLQEDVVKDVMTNANVQSSLEKEYEKMKED
REVLRAIFPTGDSKVVLPCNLARMIWNAQKIFRINTRTPTDLNPLRVVEGLQDLSKKLVI
VNGDDPLSRQAQQNATLLFNIHLRSTLCSKRMTEEFRLSTEAYDWLLGEIEAKFNHSIAH
PGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKRPKTPSLTVF
LLGQAARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQNTVVAEDQEWVNVYYEMPDF
DVTRISPWLLRIELDRKHMTDRKLTMEQIAEKINCGFGDDLNCIFNDDNAEKLVLRIRIM
NSDENKFQEDEEVVDKMDDDVFLRCIESNMLTDMTLQGIDQISKVYMHLPQTDNKKKIII
TEEGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALEREL
NHVISFDGSYVNYRHLSLLCDTMTSRGHLMAITRHGINRQDTGPLMKCSFEETVDVLMEA
SAHAESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGISVAGPTGMF
FGTSASPMSGMSPAMTPWNTGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPGYS
PAWSPTPGSPGSPGPASPYIPSPGGAMSPNYSPTSPAYEPRSPGGYTPQSPGYSPTSPSY
SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS
PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS
PTSPSYSPTSPNYTPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP
SYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSP
TSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPTSPK
YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSPAISPDDSDEENN
NT seq
5901 nt
NT seq
+upstream
nt +downstream
nt
atgcatggaccgccctccggcgacagcgcatgcccattgcgcacgatcaagagagttcaa
ttcggcatcatcagcccagatgagcttaaacggatgtccgttacggaggggggtatcaaa
taccccgaaacaacagaaggaggacgtcctaaaatgggtggccttatggacccgagacaa
ggggtcatagaaagatctgggagatgtcagacatgtgcaggcaacatgacagaatgccct
ggccacttcgggcacatagaactggcaaagccagtcttccacgtcggctttgtaacaaag
attataaaggttatgcgttgtgtctgcttcttttgctcaaagcttctagtggattcgacg
aatccaaagatcaaagacatcctaataaaatctaaagggcagcccagaaaacgtttgaca
catgtgtacgagctgtgcaaaggaaaaaacatctgtgaaggaggagaggagatggacaac
aagtttggaatggaacagcaggagactgaggaggacataaccaaggagaagggtcacggg
ggctgtgggcgctaccaaccccgcatcaaacgctctggcttggagctgttcgcagagtgg
aaacacgttaatgaggattcgcaggagaagaaaattctgctgagccctgagcgtgtccac
gagatcttcaagcgcatctctgatgaagaagacgtcatcttgggcatggacccgaagttt
gcccgaccagagtggatgattgtaactgtgttacctgtgcctcccctggctgtcaggcct
gctgtagttatgcagggctctgctcgaaaccaggatgacttgacccacaagctggcggat
attgtcaaaatcaacaaccagctgagaagaaacgagcagagtggcgcagcggctcacgtc
atcgctgaggatgtcaaactgctccagtttcacgtagccaccatgatcgacaacgagctg
ccaggccttccaagggcaatgcaaaagtctggccgtcctctcaaatccttaaagcagcgt
ctaaaggggaaggaggggcgagtccgaggtaacctcatgggtaagcgagtggacttctcc
gcccgtaccgtcatcacgccagaccccatgctgcaaatcgaccaagtgggcgtgcctcga
tctatcgcagccaacatgaccttccctgaactcgtcacaccctttaatatcgacagatta
caagagctggtgcgaagagggaacagccagtacccaggagccaaatacatcatccgggac
aacggagacagaattgaccttcggtttcaccccaaaccaagtgaccttcacctgcagatc
ggctacagggttgaaagacacatgtgtgatggcgacatcgtcatcttcaacagacagcct
acactacataaaatgtctatgatggggcacagggtccgaatcctgccgtggtcaacgttt
cgactcaacctcagtgtaaccaccccatacaatgccgactttgacggggacgagatgaac
ctccacctgcctcagtccctggagacgagggcggagatccaggagctggccatggtgccg
cgtatgatcgtcacaccccagtccaacaggcccgtcatgggtatcgtgcaggacaccctc
acagccgtgcgcaaattcaccaaacgagatgtcttcttagagcggggggaagtgatgaac
ctcctcatgttcctttccacctgggatggaaaagtgcctcagccggccatcctgaagccc
cgtcctctgtggaccggcaagcagatcttcagcttaatcattcccggacacattaacgtg
atccgcacacacagcacccatcccgacgaggaagacagcggcccttacaagcacatctcg
cccggggacaccaaggtcgtagtggagaacggggagctgatcatgggcatcctgtgtaag
aaatccctgggaacctctgccggctccctcgtccacatctcctacctggagatgggccac
gacatcacccgactcttctactccaacattcagactgtgatcaacaactggctgctcatt
gagggtcattccattggtattggtgactccattgctgatgccaagacctacctcgacatc
cagaacaccatcaagaaagccaaacaggatgtgatagaagtcatcgagaaagcccacaac
aatgaactggagccgacccccggtaacactctgaggcagacctttgagaaccaggtgaat
cgtatcctgaacgacgctcgtgacaaaacaggttcttcagcccagaagtctctgtctgag
tataacaacttcaagtccatggtggtggccgggtccaagggctcaaagattaacatctca
caggttatcgctgtggtggggcagcagaacgtggagggtaagcgaatccccttcggcttc
aaacaccgcacgctgcctcacttcatcaaggatgattacggtcctgagagcagaggcttt
gtggagaactcctacctggccggtctcactcccacagagttcttcttccacgccatggga
ggaagagagggtcttatcgacacagctgtcaagactgctgagactggttacatccagcgt
cgtctgatcaagtccatggagtcggtgatggtgaagtacgacggcaccgtgcgcaactcc
atcaaccaggtggttcagctgcggtacggagaggacggcttggcaggagagaacgtggag
tttcagaatgtggccacgctcaaaccctcgcacaaggcctttgagaagaagtttaagttc
gattgcaccaacgagcgagcgctgaggcggatgctgcaggaggacgtagtcaaagacgtg
atgaccaatgcgaacgtgcagagctctttggagaaggagtatgagaagatgaaggaggac
agggaggtcctccgagccattttccccactggggacagcaaggttgtgctgccatgcaac
ctggccagaatgatctggaacgctcagaagatcttccgcatcaacactcggaccccaacg
gacctcaaccctcttagggtggtcgagggtcttcaagacttgagcaaaaagctggttatc
gtgaacggtgacgacccgctcagccgacaggcccagcagaacgccaccctgctcttcaac
atccacctgcgctccacgctctgctccaaacgcatgaccgaggagttccgcctttccacc
gaagcgtacgactggctgctgggagagatcgaggccaagttcaaccattccatcgcccac
ccaggtgaaatggtcggcgctctggctgctcagtctctgggagagcccgccactcagatg
accctgaacactttccattacgccggtgtgtccgccaagaacgtaacactcggtgtgcct
cgtctgaaggagttgatcaacatctccaagaggcccaaaaccccctcgctgacggtcttc
ctgctgggtcaggcggctcgtgacgctgagagggccaaggacatcctctgtcggctggag
cacaccacgctgcgaaaggtgacggccaacaccgccatctactacgaccccaacccccag
aacacggtggtggccgaggaccaggagtgggtgaacgtctactatgagatgcccgacttt
gacgtgacgcgcatctccccgtggctgctgcgcatcgagctcgaccgcaagcacatgacc
gaccgcaagctgacaatggagcagatcgcagagaagatcaactgcggtttcggagatgac
ttgaactgcatcttcaatgacgacaacgctgagaagctcgtcctgcgaatccgaatcatg
aacagcgacgaaaacaagttccaagaggatgaggaggtggtggacaaaatggacgatgat
gtgttcctcaggtgcatcgagtccaacatgctgactgacatgaccctgcaaggcattgac
cagatcagcaaggtgtacatgcacttgccccagacggacaacaagaagaagatcatcatc
acggaggagggtgaattcaaggccctgcaggagtggatcctggagacggacggtgtgagc
ctcatgagggtcctcagcgagaaggacgtggatcccgtcaggacaacctccaacgacatc
gtggagatcttcacggtcttgggaattgaggcggtgcggaaggctctggagagggagttg
aaccatgtcatctcttttgacggctcctacgtcaactaccgtcacttgtccctgctttgt
gacaccatgacctcccgcggtcacttgatggccatcacgcgtcacggcatcaaccgtcaa
gacacaggcccgctcatgaagtgttcctttgaggagacggtggatgtgttgatggaggcg
tcggctcacgctgagagcgaccccatgaagggtgtgtcggagaacatcatgctcggccag
ctggccccggccggtacaggatgctttgatttgctgttggatgcggagaagtgtaaatac
ggcatggagatccctacaaacatccccggcatcagcgtggctggacccactggaatgttc
tttggaacgtcggcgagtcccatgagcggtatgtcgcctgccatgaccccgtggaacaca
ggagccacgcctgcctacggagcctggtcccccagcgtcggaagcggcatgacccccgga
gcagcaggtttctctcccagcgcggcatcagacgcaagtggcttctctccgggctactcc
cccgcctggtctcccactcctggctctccgggatccccaggacccgccagcccctacatc
ccatctccaggtggagccatgtcgcccaactactcccccacctcacccgcctacgagcct
cgctcccccggaggctacactccccagagccccggctactccccaacctccccctcctac
tcccccacgtctccctcttattccccgaccagccccaactacagccccacgtctccctcg
tactctcccacctcccccagttactccccaacctctccgtcctactctcccacatctccc
tcttattccccgacatctccctcctattcccccacctccccttcttactcccctacatcc
ccctcctactcccccacctcacccagctacagcccaacgtcgccgagctacagcccgacg
tcacccagctactcccccacttcaccttcttactccccaacctctccctcttattcccca
acctccccatcttactcccccacctccccatcttactcccccacctccccttcttactcg
ccgaccagcccgagctacagcccgacatcacccaactacacaccaacctcccccagttac
tcccccacctccccctcttactctccaacgtcgccctcatactccccgacctcccccaac
tacaccccgaccagccccaactactcccccacctccccctcgtactcccccacctctccg
tcctactcgccctccagtcctcgctacacccctcagtcgcccacctacacccccagctcc
ccctcatacagcccaagctccccctcctactcccccacctcccccaaatacacccccact
tccccctcgtacagccccagctccccagagtacaccccgacctctccaaagtactccccc
acctcaccaaagtactcgccgacgtcgccgaagtactcgcctacttcgcccacctactcc
ccgacgactccaaaatacagccccacctctcccacttactcccctacctcccccacgtac
acccccaccagccccaagtactccccgacatcgcctacttactcccccacttcccccaag
tactcacccacgtctcctacgtactcgccgactagtcccaaaggctccacgtactccccc
acctctccgggttacagccccacgtcgcccacctacagcccggccatcagccccgacgac
agcgacgaggagaacaactga
DBGET
integrated database retrieval system
