Eublepharis macularius (Leopard gecko): 129330810
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Entry
129330810 CDS
T09084
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion protein 1
KO
K06527
vascular cell adhesion molecule 1
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
129330810 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
emc04090
]
129330810 (VCAM1)
04091 Lectins [BR:
emc04091
]
129330810 (VCAM1)
CD molecules [BR:
emc04090
]
Proteins
129330810 (VCAM1)
Lectins [BR:
emc04091
]
I-type lectins (Siglecs)
129330810 (VCAM1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
C2-set
C2-set_2
Ig_4
Izumo-Ig
Ig_5
Receptor_2B4
ICAM1_3_5_D2
ICAM_N
Ig_6
Herpes_gE_N
BTD
Motif
Other DBs
NCBI-GeneID:
129330810
NCBI-ProteinID:
XP_054836985
UniProt:
A0AA97JFV0
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All DBs
Position
5:49372656..49383118
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AA seq
533 aa
AA seq
DB search
MTRVISTVTALLFFFMNSKAFDVKEIVPGGEVTAEIGSKLVLNCNTTGCESPTFLWRTQL
DSPLGGTVSNQGSRSVLTMDPVSFANEHDYLCNAACGGNNKQRTVSIRVFSLPSDPVIDI
SNPLVLGKQASITCRILGVYPAAELEVYLKKGEDLMPVGDRFEDPTTRFLETISVTTTFT
PTETDIGGKITCVARMSIEEMEVKERQAMHILNVNYGPQKTHITASPGTTLLEDGTLMLH
CVTESNPPARIVWKKQLANETLQSIVKNHTLSIPNAQLDDSGIYICEVTNEVTNKTENRT
VTVSVQGAPRRPEFSVLPSATVYEGERVTLMCSVESSPAAQIVIRKKSTSKDVILDSQDG
IVHIPSVTRDDAGSYECEAANEFGRRKMAGTLSVEALSSTAITLTNQPENVTEAEDFDIK
SATYNTPHPEYESDIPEKEDSLTPKTKNFTLYRLSKNDTITYAAEVLGAVTNGTEEIEII
IVKTEQDYVTPVIIAVFSLATVAGPMAAILVYISRKAKINGSYSLVSSLKPQV
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgaccagagtaatttccacagtgacagcgcttttattcttcttcatgaattccaaagca
tttgatgtcaaggagattgtgccgggcggtgaggttactgcagagataggcagcaagctg
gtgctaaactgcaacacaactggctgtgaatccccaactttcctttggagaacccagttg
gactccccattaggagggactgtaagcaatcaagggagccgttcagtcttgacgatggat
cctgtgagctttgccaatgagcatgattatctctgcaatgctgcttgtgggggcaataat
aaacaaaggacagtcagcattcgcgttttctcacttcccagtgatcccgttattgatatc
agcaacccacttgttcttgggaaacaagctagcatcacctgtagaattctgggtgtctac
cctgctgctgaactggaggtgtatctaaagaaaggagaggatctcatgcctgtgggagac
cgatttgaagatcctactaccagatttttggaaacaataagtgtgacaactacttttact
cccactgagacggatattgggggaaagatcacttgtgtggctaggatgtcaattgaggag
atggaagtcaaggaaaggcaggcaatgcacatacttaatgtgaattatggtccacagaaa
actcatatcacagcatctccgggtaccaccttattggaagatggcacattaatgcttcac
tgcgtgactgaaagtaacccaccagcaaggattgtatggaagaaacagctggctaatgaa
actctgcaaagcattgtaaaaaaccacacgttgtcaattccaaatgctcagcttgatgac
tctggcatatatatctgtgaagtcacaaatgaagtaaccaacaaaactgagaacagaaca
gtgactgtttctgtacaaggtgcccccaggaggccagaattttctgtacttccttctgca
acagtgtatgaaggggaaagggttacgctgatgtgctccgtggagagcagccctgctgcc
cagattgtcataagaaaaaaatccaccagtaaagatgtgatacttgatagccaagatgga
attgttcatatcccaagtgttacccgtgatgatgctggaagctatgagtgtgaagcagca
aatgaatttgggaggaggaaaatggcaggaacattaagcgtggaagctctttcctcaact
gccataacattgaccaatcaaccagaaaatgttactgaggcagaggattttgatattaag
agtgcaacctataatacgccacatccagaatatgagagtgacattccggaaaaggaagat
tcgcttacaccaaagaccaaaaatttcacattgtacagattatcaaaaaatgataccatc
acatatgcagcggaggttcttggtgctgtcacaaatggtacagaagagattgaaattatc
atagtcaaaacagaacaggattatgtgacacctgtgatcatcgcagttttttctttagca
acagtagcaggccccatggcagcaatattggtttacatttctaggaaggcaaagattaat
ggatcctacagtcttgtaagctcactgaaaccacaagtataa
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