Eublepharis macularius (Leopard gecko): 129342157
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Entry
129342157 CDS
T09084
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc04020
Calcium signaling pathway
emc04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
129342157 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129342157 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
emc04040
]
129342157 (GRIN1)
Ion channels [BR:
emc04040
]
Ligand-gated channels
Glutamate (ionotropic)
129342157 (GRIN1)
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GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
DUF6724
Peripla_BP_6
Rap-GAP_dimer
Motif
Other DBs
NCBI-GeneID:
129342157
NCBI-ProteinID:
XP_054853745
UniProt:
A0AA97LFE3
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Position
14:complement(43925655..43978924)
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AA seq
941 aa
AA seq
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MSAMRLLLLAVLVSFSFARAGCEPKIVNIGAVLSTKKHEQVFREAINQANKRHGTWKIQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPAPNDHLTPTPVSYTAGFYRIPVIG
LTTRMSIYSDKSIHLSFLRTVPPYSHQSNVWFEMMRYYKWNHIILIVSDDHEGRAAQKKL
ETLLEEKESKSKKRNYENLEQLSYDNKRGPKAEKVLQFEPGTKNVTSLLLEAKELEARVI
ILSASEDDATTVYTSAAKENMTGPGYVWLVGEREISGNALRHAPEGLIGLQLMNGKNESA
HIRDAVAVVAQAVHDLFEKENITDPPRGCVGNTNIWKTGPLFKRVLMQTKYAEGVTGRVE
FNEDGDRKYANYSVMNLQNNKLVQVGVYNGSHFLPNDRKIIWPGGETETPQGYEMSTKLK
IVTIHQEPFVYVKPTLADGKCKALLNSTGGLVQQVLCTGPNETMPGRPSVMLCCYGFCID
LLIKLAKTMNFTYEVHLVGDGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINN
ERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLD
RFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAM
IIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELST
MYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIG
MRKDSPWKQNVSLAILNLHENGFMEELDKTWVRYQECDSRSNAPATLTFENMAGVFMLVA
GGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKATFR
SFTSTLASSFKRRRSSKDTQYHPTDITGQLNLSDPSVSTVV
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgatgcgcctcttgcttctcgccgtgctcgtctccttctcgtttgcccgcgcc
ggctgcgagcccaagatcgtcaatatcggcgcggtgctgagcaccaagaaacatgagcag
gtcttccgcgaggccatcaaccaggccaacaagcgccatggcacctggaagatccagctc
aacgccacctccgtcacgcacaagcccaacgccatccagatggccctgtccgtctgcgag
gatcttatctccagccaggtctatgccatcttagtgagccacccaccagctcccaatgac
cacctaacaccaacgcctgtgtcatacacagccggcttctatagaatccctgttattggg
ctgacaacacgcatgtctatatattcagataagagtatccacttgtctttcttgcgcact
gtccccccctattcccaccagtccaatgtctggtttgaaatgatgcgttattataagtgg
aaccacattattctcattgtcagcgatgatcacgaggggcgggcggcgcaaaagaaacta
gagaccctcttggaggaaaaagaatccaagagtaaaaaaaggaactatgaaaacctcgaa
caactatcctatgacaacaagcgaggacccaaggctgagaaagtgcttcagtttgaacct
ggaacaaaaaacgtgacttcgctgctgctggaagctaaggaactggaggcccgagttatt
atcctctctgcgagtgaggatgatgctacaactgtgtacacatcggcagccaaagaaaac
atgactggcccaggctatgtgtggttggtaggggaaagggagatctcaggcaatgctctg
cgtcatgcaccagaagggttaattggtttgcagctcatgaatgggaagaatgagtctgca
cacatcagagatgcagtggctgtggtggcccaggccgtgcatgacttgtttgagaaagag
aacattacagatccaccaagaggctgcgtgggaaataccaacatctggaagacgggacct
ctgttcaagagagtgctgatgcagaccaagtatgcagagggtgtgactggccgggtggag
ttcaatgaagatggagaccggaaatatgccaattacagtgtcatgaacctacagaacaat
aaactggtgcaagttggagtatacaatggtagccacttcctgcccaatgaccgcaagatc
atctggcctggaggagaaactgagacaccacagggctatgaaatgtctacaaaattaaag
attgtcacaatccaccaagagccctttgtctatgtgaaaccaacactggcagatggaaag
tgcaaagcactgctcaacagtactggggggctagtgcaacaggtcctctgcactgggcca
aatgagactatgccaggacgccccagtgtcatgctgtgttgctatggcttctgtatcgac
ttactgatcaagcttgctaagacaatgaatttcacctacgaagttcaccttgtaggcgat
ggtaaatttggaacgcaagagagggtgaacaacagcaacaagaaagagtggaatgggatg
atgggggagcttctgagtggccaagctgacatgattgtggccccgctgactatcaacaat
gagcgagcacaatacattgaattctccaagcctttcaaataccagggactcaccatcttg
gtcaaaaaggaaattccccgcagcaccttggactcattcatgcaaccattccagagcact
ttgtggcttttggtggggctctcggtgcatgtggtagctgtgatgttgtatctcctcgac
aggttcagcccatttggccggtttaaagtgaacagtgaggaagaagaagaggatgccctg
acactctcttctgctatgtggttctcctggggagtcctcctgaactctggcattggagaa
ggagctccccggagtttctcggctcgaattctcggaatggtgtgggctggatttgccatg
attattgtggcctcatatactgccaatctggctgccttcctggtgttggacagacctgaa
gaacgaatcacaggcatcaatgatcctaggttgagaaacccctcggataaattcatatat
gctacagtgaagcaaagttcggtggacatttacttccgccgtcaggtggagctgagcacc
atgtaccgccacatggagaaacacaattatgagagcgctgcagaagctatccaggctgtc
agggataacaagctccatgcattcatctgggattcagcagtgctagaatttgaagcctct
cagaagtgtgacctggtgacaacaggggagcttttcttccgctctggttttggcatcggg
atgcgcaaggacagcccttggaagcagaacgtctccctggccatcctcaacctccacgag
aatggcttcatggaagagcttgacaagacttgggtgaggtatcaggagtgcgattcccgt
agcaatgccccagcaacactcacctttgagaatatggcaggtgtattcatgctggtggct
ggaggtattgtggccgggatatttttaatattcatagaaatagcttacaaaaggcataaa
gacgcccggaggaagcagatgcaactggcgtttgcagcagttaatgtgtggcggaaaaac
ctgcaggatagaaaaagtggtagagcagaaccagaccctaaaaagaaagccacttttagg
tccttcacctctaccctggcctccagcttcaagagacgtaggtcctccaaagacacgcag
tatcatcccaccgacatcacggggcagctcaacctctccgacccctcggtcagcaccgtg
gtgtga
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