Enterobacter sp. T2: G0034_12415
Help
Entry
G0034_12415 CDS
T07956
Symbol
pdeR
Name
(GenBank) cyclic di-GMP phosphodiesterase
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
enz
Enterobacter sp. T2
Pathway
enz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
enz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
G0034_12415 (pdeR)
Enzymes [BR:
enz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
G0034_12415 (pdeR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
PAS_10
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
QIB82455
LinkDB
All DBs
Position
2593019..2595010
Genome browser
AA seq
663 aa
AA seq
DB search
MIDDLEQNLLFRYMGTHSPWWRLSADSNALHLAASENADATQVVTLDDEQATLIRQLTVI
TSSISMNLSLYGEEVPVHLVGRKITRNEWAGTASAWNDTPSVARDLAQGLSFAEQVVSEA
NSVIVILDQHGNIQRFNRLSEEYTGLKEQEVIGQNVFKLFMSRSEAAASKRNITGFFRNG
SSYEVERWIKTRKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRVLANTD
TITGLPNRNAIHEQISDAINHRGETQVGVVYLDLDNFKKVNDAYGHMFGDQLLQAVALAI
LSCLDEGQVLARLGGDEFIVMATNTSQGSLEAMASRILTRLRQPFRIGLIEIYTGCSLGI
ALAPQHGNDRESVIRNADTAMYTAKENGRGKFCVFSPEMNQRVFEYLWLDTNLRKALDND
QLLIHYQPKMTWRGEVRSLEALVRWQSPERGLIPPLEFISYAEESGLIVPLGRWVMLDVV
RQVAKWRDKGINLRVAVNVSARQLADQTIFSDLKQALKDLHFEYCPIDVELTESCLIENE
ELALSVIQQFSRLGAQIHLDDFGTGYSSLSQLARFPIDAIKLDQSFVRDIHKQSISQSLV
RAIVAVAQALNLQVIAEGVENAKEDAFLTKNGVNERQGFLFAKPMPAAAFERWLKRYQAR
QQR
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacgatcttgagcagaatttgctgtttcgttacatgggtactcacagtccgtgg
tggcgattgtcggcagacagcaacgctctgcaccttgccgccagcgaaaatgccgatgcg
actcaggtggtgacgctggacgatgaacaagccacgttgatccgccagttaacggtaatt
acctccagcatttcaatgaacctctccctgtatggcgaagaggttcccgtgcatcttgtc
ggccgcaaaatcacccgaaacgagtgggctggcacggcatcggcctggaacgataccccc
tccgtagcacgcgatctcgctcaaggactctccttcgcggaacaggtggtttcggaagcg
aattccgtcattgtgattctcgatcagcacggcaatattcagcgttttaatcgcctgagc
gaagagtataccggtctgaaagagcaggaagtgatcggtcagaacgtgttcaaattgttt
atgagtcgcagcgaggcggcagcctcgaagcgaaatatcaccggtttcttccgtaacggc
agctcctacgaagttgaacgctggatcaagacgcggaaaggacaacgcttgtttctgttc
agaaacaaattcgttcacagcggcagcggtaaaaacgaaatatttcttatttgctccggc
accgacattaccgaggaacgtcgggcgcaggagcgcctgcgcgtgctggccaataccgat
accatcaccggtttacccaaccgcaatgccatccacgaacagatctcagacgccatcaac
catcggggcgaaacgcaggttggcgtggtgtatcttgacctggataacttcaaaaaggtc
aacgatgcctacgggcatatgtttggcgatcagctcttacaggcggttgcactcgccatt
ctgagttgccttgacgaggggcaggtcctggcccggctcggcggcgatgagtttatcgtg
atggccacgaatacgtctcagggctcgctggaagcgatggcgtcgcgcattctgacccgc
ctgcgccagccgttcagaatcgggctgattgagatatataccggctgttctttggggatc
gccctcgcgccgcagcacgggaacgatcgggaaagtgtgattcgcaatgccgatacggcc
atgtacaccgccaaggaaaatggcaggggtaagttctgcgtcttctcccctgaaatgaac
cagcgcgtatttgagtatctttggctggacaccaatctgcgtaaagcgctggataacgat
cagcttctgattcactaccagcctaaaatgacctggcgcggtgaggtcagaagtcttgag
gcgctggtccgctggcagtcgccggagcgcggcttgatcccaccgctggaatttatctct
tatgccgaagagtccggtttgattgtgccgctggggcgctgggtgatgctcgacgtggtt
cgtcaggtggcgaaatggcgtgacaaggggattaacctgcgcgtggccgtgaacgtctct
gcacgtcagcttgccgaccagacgattttcagcgatttaaagcaggcgcttaaggatctg
cattttgagtactgtcctatcgacgtcgagttaacagagagctgtctcatcgaaaacgaa
gagctggcgctttcggtgatccagcaattcagccgactcggggcgcaaatacatctggat
gactttggtacgggctactcttccctttcccagctggcgcgttttcctattgacgccatt
aaactcgatcaatcttttgtcagagatattcataagcagtccatctcccagtctctggta
cgcgccattgtcgcagtggcacaggccctgaatctgcaggtgatcgccgagggggtggag
aatgcaaaagaagacgcctttctgactaagaatggcgtcaacgaacggcagggtttcctt
tttgctaagccgatgcccgctgccgcattcgagcgatggctaaaacgctatcaggcgcga
caacagcgctag
DBGET
integrated database retrieval system
