Escherichia coli O103 H2 12009 (EHEC): ECO103_2788
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Entry
ECO103_2788 CDS
T01096
Symbol
trmC
Name
(GenBank) fused 5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase/FAD-dependent demodification enzyme
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
eoh
Escherichia coli O103:H2 12009 (EHEC)
Brite
KEGG Orthology (KO) [BR:
eoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eoh03016
]
ECO103_2788 (trmC)
Enzymes [BR:
eoh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
ECO103_2788 (trmC)
Transfer RNA biogenesis [BR:
eoh03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
ECO103_2788 (trmC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
BAI31555
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Position
2835820..2837826
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AA seq
668 aa
AA seq
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MKHYSIQPANLEFNAEGTPVSRDFDDVYFSNDNGLEETRYVFLGGNQLEVRFPEHPHPLF
VVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPEL
APWAEQLQAQWPMPLPGCHRLLLDEGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGF
APAKNPDMWTQNLFNAMARLARPGGTLATFTSAGFVRRGLQDAGFTMQKRKGFGRKREML
CGVMEQTLPLPCSAPWFNRTGSSKREAAIIGGGIASALLSLALLRRGWQVTLYCADEAPA
LGASGNRQGALYPLLSKHDEALNRFFSNAFTFARRFYDQLPVKFDHDWCGVTQLGWDEKS
QHKIAQMLSMDLPAELAVAVEANAVEQITGVATNCSGITYPQGGWLCPAELTRNVLELAQ
QQGLQIYYQYQLQNLSRKDDCWLLNFAGDQQATHSVVVLANGHQISRFSQTSTLPVYSVA
GQVSHIPTTPELAELKQVLCYDGYLTPQNPANQHHCIGASYHRGSEDTAYSEDDQQQNRQ
RLIDCFPQAQWAKEVDVSDKEARCGVRCATRDHLPMVGNVPDYEATLVEYASLAEQKDEA
VSAPVFDDLFMFAALGSRGLCSAPLCAEILAAQMSDEPIPMDASTLAALNPNRLWVRKLL
KGKAVKAG
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacactactccatacaacctgccaacctcgaatttaatgctgagggtacacctgtt
tcccgagattttgacgatgtctatttttccaacgataacgggctggaagagacgcgttat
gtttttctgggaggcaaccaattagaggtacgctttcctgagcatccacatcctctgttt
gtggtagcagagagcggcttcggcaccggattaaacttcctgacgctatggcaggcattt
gatcagtttcgcgaagcgcatccgcaagcgcaattacaacgcttacatttcattagtttt
gagaaatttcccctcacccgtgcggatttagccttagcgcatcaacactggccggaactg
gctccgtgggcagaacaacttcaggcgcagtggccaatgcccttgcccggttgccatcgt
ttattgctcgatgaaggccgcgtgacgctggatttatggtttggcgatattaacgaactg
accagccaactggacgattcgctaaatcaaaaagtagatgcctggtttctggacggcttt
gcgccagcgaaaaacccggatatgtggacgcaaaatctgtttaacgccatggcaaggttg
gcgcgtccgggcggcacgctggcgacatttacgtctgccggttttgtccgccgcggtttg
caggacgccggattcacgatgcaaaaacgtaagggctttgggcgcaaacgggaaatgctt
tgcggggtgatggaacagacattaccgctcccctgctccgcgccgtggtttaaccgcacg
ggcagcagcaaacgggaagcggcgattatcggcggtggtattgccagcgcgttgttgtcg
ctggcgctattacggcgcggctggcaggtaacgctttattgcgcggatgaggcccccgca
ctgggtgcttccggcaatcgccagggggcgctgtatccgttattaagcaaacacgatgag
gcgctaaaccgctttttctctaatgcgtttacttttgctcgtcggttttacgaccaatta
cccgttaaatttgatcatgactggtgcggcgtcacgcagttaggctgggatgagaaaagc
cagcataaaatcgcacagatgttgtcaatggatttacccgcagaactggctgtagccgtt
gaggcaaatgcggttgaacaaattacgggcgttgcgacaaattgcagcggcattacttat
ccgcaaggtggttggctgtgcccagcagaactgacccgtaatgtgctggaactggcgcaa
cagcagggtttgcagatttattatcaatatcagttacagaatttatcccgtaaggatgac
tgttggttgttgaattttgcaggagatcagcaagcaacacacagcgtagtggtactggcg
aacgggcatcaaatcagccgattcagccaaacgtcgactctcccggtgtattcggttgcc
gggcaggtcagccatattccgacaacgccggaactggcagagctgaagcaggtgctgtgc
tatgacggttatctcacgccacaaaatccggcgaatcaacatcattgtattggtgccagt
tatcatcgcggcagcgaagatacggcgtacagtgaggacgatcagcagcagaatcgccag
cggttgattgattgtttcccgcaggcacagtgggcaaaagaggttgatgtcagtgataaa
gaggcgcgctgcggtgtgcgttgtgccacccgcgatcatctgccaatggtaggcaatgtt
cccgattatgaggcaacactcgtggaatatgcgtcgttggcggagcagaaagatgaggcg
gtaagcgcgccggtttttgacgatctctttatgtttgcggctttaggttctcgcggtttg
tgttctgccccgctgtgtgccgagattctggcggcgcagatgagcgacgaaccgattccg
atggatgccagtacgctggcggcgttaaacccgaatcggttatgggtgcggaaattgttg
aagggtaaagcggttaaggcggggtaa
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