Exaiptasia diaphana (Aiptasia): 110234847
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Entry
110234847 CDS
T05080
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
epa
Exaiptasia diaphana (Aiptasia)
Pathway
epa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
epa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110234847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
epa03021
]
110234847
Enzymes [BR:
epa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110234847
Transcription machinery [BR:
epa03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
110234847
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
110234847
NCBI-ProteinID:
XP_028513706
LinkDB
All DBs
Position
Unknown
AA seq
1686 aa
AA seq
DB search
MTTSNEVPFHRLEGVKLSLYSTDEIKKLSVKRITNPETFDSLLHPNYGGLYDPALGPADR
DELCETCGQNNIHCPGHLGHIELPLPVYHPLFMKIMVVILRSSCFCCHNLLIQKVAKHTY
KCQVKLLDYGLITEANELETIVKNLISTSNEHGLKSEADNSTISDIDKHVHDLLQQVDKK
EARKRANAMNITDSRHEISKNFLKTHMVSRRRYCPVCKAPSREIRSEYNSKIYLKPLPKR
EAQKWASTRIAMEHLNSLESHAKRDPEEEFMDQGDEATQTPANVADSNDCDKEVAKCLQQ
SFLTPKEVQEHLVKVWXKDGDFLNILLGGYQTPKSRHRKSSSEMFFVDILPVIPTRFRPM
SALGEKRFENPQTANLCKVLKDCECIVDNLKGLNKKLQQSTEEXGDEPZPEQPKKKRGKN
AKVYVSGDTPSERLHNGWLKLQTDVNCVMDSDLDKLSTIKYPGVRQLLEKKEGLFRKHMM
GKRVDFAARSVISPDPYINTDEIGIPEVFATKLTYPQPVTTWNVKQLRQAVINGPLVHPG
AILVENENGTKTLLSDTDENQRQAIAKRLLTPSGNAQSALQSCKKVYRHLHNGDVMLLNR
QPTLHRPSIMAHKVRVLSKEKTIRLHYSNCKAYNADFDGDEMNAHFPQNELARAEAYNLA
STNFQYLVPKDGTPLGGLIQDHIVSGVRMTIRGRMFNRGDYQQLVFSALNFKNKPIKLVK
PCIVKPXLLWSGKQVVSTVLMNIIPDGLKLLNLKGKSKINPKNWSTHKPKRQFLDLEILK
QDEMTESEVIFREGEFLCGVLDKAHYGNTPYSLVHCCYELYGGVVAGEFLSSLARLFTTF
LQFHGFTLGVKDILVTKRADKQRRKFIAKGRESGHEAATKAFGMLEECNKSELRDRMQAA
HHDTDGTDMKELDQFVKRKTDHFQDEINKACIPRGLYQKFPENNLQLMVQAGAKGSAVNC
MQISCLLGQIELEGRRPPIMLSGRSLPSFLPYDTSPRAGGFVDGRFLTGIRPQEYFFHCM
AGREGLVDTAVKTSRSGYLQRCLIKHLEGLQVNYDLTVRDSDGSVVQFYYGEDGLDILKT
KFLSENQYPFMISNYKVRNTGNPKGFYKHLGLIESILFRLYEKLCSKPPPPVISKLRPDQ
YFGAVPEKISSSLNSYIQRNPHNSLSNGEESKSNDTVDADKFRSLMYLKTLRSLVEPGEA
VGLIAAQSIGEPSTQMTLNTFHFAGRAELNVTLGIPRLREILMTASPHIKTPTMDLPLLP
TKKAVRKAKKLQTKFTRVMLSEVLQSVDVWESLTAKELGTRTRAYRIRFLFLPESQYKDK
FYCSAHDILHYVETVFVKKLIGVIQKTVKNKQTQRLLEVVEDKGTQGAAETGTEEPDDDD
DNAELSDXDGADGGAADMKQRQKLEQHASYDAPDVDELEIEKELGAESGDDDDEEQASIS
ETQSTIGDPEDTASTLETKNKSKRKSSMDASRQERVVYSDNHIASYSYDDEEEQWCEVVI
KFPVLRWKVRVTTLIEKLAKQSVVYETPGIKRCFLVEEKDTNYLKTDGVNFQVAFRYPDI
LDINKLYTNDIHAVANTYGIEAAARVIAKEVKNVFGGYGIHVDPRHLILVAEYMTYEGKI
KAFNRIGIESSASPFQKMSFETTTHFLRGAVLSGDTENLKSPSSRLVVGRVVGGGTGCFE
LLQPWC
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atgacaacttcaaacgaagtaccatttcatcgtcttgagggcgtaaaactctctctctat
tcaacagatgagataaaaaagctcagtgtgaagcgaataacaaatccagaaacttttgac
tctcttcttcacccaaactatggcgggctttacgatccwgcgttggggcctgcagacaga
gatgaactatgcgagacgtgtgggcaaaacaacattcactgccctggccatcttggacac
atagagctgcckttgccygtrtaccatcctctctttatgaagattatggtcgtgattttg
cgttcctcgtgtttttgttgtcataatttgttgatacagaaagttgcaaagcatacttat
aaatgccaagtcaaacttcttgattatggactaattacagaagcaaatgaactagaaaca
attgtaaagaacttgatttcaacgtctaacgaacatgggttaaaaagtgaggcagataac
agtactatatcagacatagataaacatgtccatgatctcctacaacaagttgataaaaaa
gaagcaagaaaaagagcaaacgctatgaatattacagactcacgacatgagatttcaaaa
aacttcttaaaaactcatatggtttcaaggagaaggtattgtccagtttgcaaggcaccg
tccagagaaattcgtagtgagtataactcaaagatttatttgaagcctttgcctaagagg
gaggcwcaaaagtgggcttcaacaagaattgcaatggaacatttgaacagtttggagagy
catgctaagagagacccagaagaggaattcatggatcaaggggatgaagctactcaaact
cctgcaaatgtagcagactcaaacgactgtgataaagaagtagcaaaatgtcttcagcaa
agctttttaaccccaaaagaagtacaagaacatctagtraaggtttggaygaaagayggk
gactttttgaatatccttcttggtggctaccagactccaaagtcaagacatcgaaagtct
tcctcagaaatgttttttgttgayatacttccygttattccaacacgatttagaccaatg
tcagctcttggtgaaaaaaggttygagaatccccagactgctaacctgtgtaaggttctg
aaggactgtgagtgtatagtagataacttgaagggtctcaacaagaaactacaacaatct
acagaagagrctggagatgaaccasaaccagaacaaccaaagaaaaaaaggggaaagaat
gctaaagtgtatgtcagtggtgatactccttcagaaaggttgcataatggttggctaaag
ctgcaaactgatgtcaactgtgtaatggacagcgatcttgataagttatctacaattaaa
tatcctggagtcagacagttattggagaagaaagaaggcttgtttcgtaagcatatgatg
ggtaaacgagtagactttgctgccagatctgtgatatcaccagatccttacatcaatact
gatgagattggtatcccagaggtgtttgcaacaaagcttacttatccccagccagttacc
acatggaatgttaaacagctacgycaggctgtgattaatggtccacttgtacacccaggt
gctatacttgtggagaatgaaaatggtacaaaaacactgttgagtgacacagatgaaaat
caaagacaagccattgcaaagagattgctgactccatcrgggaatgcacagagtgctttg
cagtcctgcaaaaaggtttatcgtcacctacacaatggagacgtaatgctkctcaaccgt
caacccacacttcacaggcccagcataatggctcacaaggtccgtgtcttgtctaaggaa
aaaactatccgtcttcactattcaaactgcaaagcttacaatgctgattttgatggtgat
gaaatgaatgcgcattttcctcagaatgagctcgcaagagcagaagcctacaatctagct
agcacaaactttcagtacttagtacccaaagacggcacccccctgggtggcttgattcaa
gatcayattgtatcaggtgttaggatgaccatcagggggaggatgttcaacaggggggac
taccaacagttggtgtttagtgcccttaatttcaagaacaaacctattaaactagtcaaa
ccttgtattgttaaaccamagttgctgtggtctggaaaacaggtcgtttcaactgtactr
atgaacataataccagatggtttgaaactactgaacttaaagggaaaatctaagataaat
ccaaagaattggtcaacacacaagccaaaaagacagtttcttgaccttgagattctcaaa
caagatgaaatgactgagtctgaggttatttttcgagagggagagtttctgtgtggagta
cttgacaaggctcactatggtaacacaccatacagtttggttcattgttgctatgagctc
tatggaggagttgtggccggggagtttttgtcatcacttgcacgtctcttcaccacattc
ctacagtttcatggctttactcttggtgtcaaggacatccttgtgaccaagcgtgctgat
aaacaaagaaggaagtttattgccaagggtcgggaatcagggcacgaggccgccactaaa
gcttttggcatgttagaagaatgcaacaaatctgaattgagggaccgtatgcaagcagct
catcatgacaccgatggaactgacatgaaggaattagaccagtttgtgaagagaaagact
gaccactttcaagacgagattaacaaggcgtgtatcccacgaggattgtaccagaaattc
ccagaaaataatcttcaactgatggtccaagctggtgcaaagggatcagccgtcaactgt
atgcagatatcatgtcttctyggtcaaattgagttggagggtcgacgtccacccattatg
cttagtggtcgttctctaccrtcttttctgccctatgatacyagtcccagggctggcggc
tttgtcgatgggaggtttttaacaggcattagacctcaggagtacttctttcactgtatg
gctggtagagagggtctcgttgatacagctgtcaagacaagtcgtagtggttatctacag
cgctgcctaataaaacatctagaaggactacaagtaaactatgacttgactgtcagggat
agtgatgggtctgtcgtacagttctactatggagaagatggacttgatattctgaagacc
aagtttctatcagagaatcaatatccttttatgataagtaattacaaggtgagaaacaca
gggaacccaaaaggcttctataaacatttaggactgattgagagtatattgtttagacta
tatgaaaagctttgtagcaaaccaccacctcctgttatatccaaactaagaccagaccag
tattttggtgcagttcctgagaagatmtcctcatcgttaaatagctacatccaaagaaac
ccgcacaayagcttgtctaatggagaggaatccaagtcgaatgataccgtagatgctgat
aaattccgatccctaatgtacctcaaaacactacgttcactcgttgagccaggagaagct
gttggtcttatagcagctcagtcaattggtgagccgtcgacgcagatgacgttgaacaca
tttcactttgctggtcgtgctgagctcaacgttacactaggaattcctagactgagagaa
atcctgatgacagccagtccacacatcaaaacacccactatggaccttccgttgctaccg
accaaaaaagctgtgagaaaagccaagaaactacaaacgaagttcactagagtgatgtta
tcagaggttcttcagtccgtagacgtctgggaatctcttactgctaaggaattgggaaca
aggacgcgagcgtatcgaatccgattcctttttttacccgagtcgcagtacaaggacaag
ttctactgctcagcccacgatatccttcactatgtggagactgtatttgtcaagaaacta
attggtgtgatccagaaaaccgtgaaaaacaaacagacgcagaggcttcttgaagtcgta
gaagacaagggaactcagggagccgccgaaaccggaacagaagaaccagatgatgacgat
gataacgccgagctttcagacgawgatggtgctgatggtggagctgccgatatgaagcaa
agacagaaacttgagcaacatgctagctacgatgctccsgatgttgacgagttagaaatc
gagaaagaactaggagcagaaagtggtgacgatgatgacgaggagcaagcaagcatcagt
gaaacacagtctactataggagatcctgaagatacggcttccactttagaaacgaaaaac
aaaagcaaacgaaaatctagcatggatgctagtagacaagagcgtgtagtctacagtgat
aatcatatcgcttcatactcgtatgatgacgaagaagaacagtggtgtgaagtggttatt
aagttcccagtcttaagatggaaagtgcgagtcacaactctgattgaaaagctcgctaaa
cagagtgttgtatacgagacaccaggaatcaaacgatgctttcttgtagaagagaaggac
acgaactatctcaagactgacggagtcaatttccaagttgcttttcgataccccgatata
ctggacatcaataagttgtacactaatgatatccatgctgtcgcaaacacgtatggtatc
gaggctgcggctcgcgtcattgccaaggaagtcaaaaacgtttttggtggttacggcatm
catgtggacccamggcatttaatccttgtagcggaatatatgacttacgagggaaaaatc
aaagccttcaaccgaatagggatcgaatcaagcgcgtctcccttccagaagatgagcttt
gaaackackacgcactttttacgtggtgctgtcttgtctggagacacagaaaatctcaaa
tcaccttcgtcgaggcttgttgttggccgagtagttggtggagggactggatgctttgaa
ttgcttcagccgtggtgttga
DBGET
integrated database retrieval system
