Exaiptasia diaphana (Aiptasia): 110235463
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Entry
110235463 CDS
T05080
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
epa
Exaiptasia diaphana (Aiptasia)
Pathway
epa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
epa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110235463
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
epa03021
]
110235463
Enzymes [BR:
epa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110235463
Transcription machinery [BR:
epa03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
110235463
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
110235463
NCBI-ProteinID:
XP_028513800
LinkDB
All DBs
Position
Unknown
AA seq
1306 aa
AA seq
DB search
MVKEQFREAGVTKKISHVNFGMFSPEEMQQYSHLQCVSKNLYCQDNSRKPVPYGVLDAQM
GTCSKDRSCETCGKGLADCVGHYGYIDLELPVFHVGHFRSTIVTLQCICKSCSRVLLPPA
EKKQFLESLNRPVLSALAKKGIKKKIIEKCKKISHCPYCEALNGFVRKAGLMKIIHEKYK
STKKILDPEISEFHSSFEAAMEHNKELVGFVHKAQEVLNPLRVLDIFKQIPEKDCPLLML
RPGLSHPKDLIFTRILVPPVCIRPSVVSDLASGSNEDDVTMKLTEIVFLNDVIRKHRAIG
AKVQMIMEDWDFLQLQCSLYINSEMSGIPLNMQPKKGTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDQVAVPIHVAKILTYPERVTSSNMALMKKLVLNGTDQHPGANF
IQQRETNIKKFLKYGNRKLIAKQLKIGDVVERHLIDGDIVLFNRQPSLHKLSIMSHYATV
RPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEAIELMGVKNNLVTPRNGEPLIA
AIQDFITGAYLMTYKDVFLDRSQISQLCSIMVAGRDLTTVIDLPPPAILKVLTHISFYMY
ALIIPSYLPSFLPSSPSSLPSSTHSSLPSSNEDLCHNDSFVVIHNSDLMCGVLDKAVLGS
GSKNSIFYVLLRDYGPQVSADAMWRLARVCPFFLSNRGFSIGIGDVTPGQGLLQAKEELL
NTGYSKCDGFIQDFKEGKLQTQPGCSAEETLEAVILKELSVIRDHAGKACLRELHKTNTP
LNMALCGSKGSFINISQMIACVGQQAISGKRIPDGFEDRSLPHFKRHSKIPAAKGFVKNS
FFSGLTPTEFFFHTMGGREGLVDTAVKTAETGYMQRRLVKSLEDLCCHYDHTVRNSVGDI
VQFKYGGDGLDPTDMEGKDKPLDFARVFSHVQCNHVMRHERPMPPQMIRQRVNKILDGEV
FKDCSDDFKGEVKSYMDGLIKKIDQTQQRYGLDFDPNKQKFFALXHAVFTNRTTKHPNQG
KTSSYFVRDSEVMDCCPSEGQRYHPEMGQEDITLGVPRIKEIINASRRISTPIISAQLTN
DTDADLARAVKGRIERTLLGEVTEYIEEVYTPDSCYVLLXLALSRIRLLKSVFDHFSFIS
LTIHFFLIHLIPGVKGTACSSNNTIEVERVLGIEAARQTIMNEIIYTMKNHGMSIDVRHV
MLLAELMAFKGEILGITRFGLSKMKESVLMLASFEKTADHLFEAALHGRTDSIDGVSECI
IMGMPMSVGTGIFKLLHKPTNPRKPCRRPIIFDNKEFHLPLTSCTT
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atggttaaagaacagtttagagaagctggtgtcaccaaaaagataagtcatgtcaacttt
ggcatgttctcaccagaggaaatgcagcaatactcmcatctacartgcgtcagcaaaaac
ctgtattgccaggacaattcacgcaaacctgtcccmtatggtgtgcttgatgcccaaatg
ggtacatgctctaaagacagaagctgtgagacttgtggtaaaggattggctgactgtgtt
ggtcactatggatacattgatcttgagctgcctgtcttccatgtgggacattttagatct
actattgtaaccctacaatgtatatgtaagagttgtagccgtgtattattgcccccagct
gagaaaaagcagttcttggagagtttgaatcgtcctgtgctcagtgccttggctaaaaag
gggatcaagaagaagataattgaaaagtgtaaaaagatttctcattgcccgtattgtgaa
gcacttaatggttttgtgaggaaagcaggattgatgaagattatacatgagaaatacaag
tcaacaaaaaagatacttgatccagagatttcagagtttcayagctcttttgaagcagcc
atggagcacaacaaagagcttgttggttttgtccataaagcacaggaggtgcttaaccca
ttaagagtgcttgatatattcaaacaaatccccgaraaggactgtccattgttgatgctt
cgcccaggtctcagtcatccaaaagatttgattttcacgcgtattcttgttcctccggtg
tgcatcagaccttctgttgttagtgacctggcaagtggaagcaatgaagatgatgtgact
atgaagctgacagagattgtatttctaaatgatgtcatccgtaaacacagagcaataggg
gccaaggtgcagatgattatggaagattgggatttcttgcagcttcagtgttctctgtac
attaacagtgaaatgtctggtattccmctcaacatgcagcccaagaaagggactagagga
ttcgttcaaagacttaagggcaaacaaggacgtttccgtggaaacctgtctggaaagaga
gttgacttctctggtcggactgtgatatcacctgatcctaatctaaggatagaccaggtt
gcagttccaatccatgtagccaaaatattaacttatcctgaamgggtaacrtcrtccaat
atggcrcttatgaagaaattagttttaaayggtacagatcaacatccaggagcaaacttt
atccagcaacgagaaaccaacatcaagaaatttttgaagtatggcaacagaaagctgata
gccaagcaattgaagattggcgatgttgtagaaagacacttgattgayggtgatattgtc
ytgttcaatcgacaaccgtcgcttcacaaactgagcattatgtctcattacgcgaccgtc
cgtcctcaycgtacattcaggttcaatgaatgtgtctgtacgccttacaatgctgacttt
gatggagatgaaatgaatctccatctgccacaaacagaagaagcaaaggcagaggcaata
gaacttatgggggtaaagaacaatcttgtaaccccamgaaatggtgaaccattgattgca
gcaatccaggattttattacaggggcatatcttatgacatacaaggatgtattccttgat
cgcagtcaaatatcccagttgtgtagyatcatggttgctggtagagacttgacaacagtg
attgacctgccacctcctgctattttaaaggtactcactcacatttcattttatatgtat
gctcttatcatcccttcctatcttccttcctttcttccatcatccccttcttccctccct
tcatctactcattcgtcccttccctcntctaatgaagacttgtgccacaatgactctttt
gtggtgattcataacagtgacctaatgtgtggtgttcttgacaaggctgttcttggttca
ggctctaaaaacagyatcttttatgttcttctcagagactatggacctcaggtttcagca
gatgccatgtggagactggctagagtatgtcctttctttttgagtaatcgtgggttctct
attggtattggtgacgtcacacctggtcagggtttactgcaagccaaagaagaacttctg
aatactgggtattcaaagtgcgatggatttattcaagatttcaaagaaggaaaacttcaa
actcaacctggatgttctgctgaagaaactctagaggccgtcattttaaaggagctgtca
gtcatcagggaccacgctggtaaagcatgcctragggaactccacaaaacaaacactcca
ttaaatatggccctttgtgggtcgaaagggtcgttcatcaacatatctcagatgattgct
tgtgtggggcagcaggccatttctgggaagagaatccctgatggytttgaagatcgttcc
ctgcctcactttaaacgacattccaagataccagcagcaaaaggtttcgtgaagaacagt
tttttctcaggtctcactccaactgagttctttttccatacaatgggaggacgagaaggt
cttgtagatacagctgtcaaaacagcagaaacaggctacatgcagcgacgtcttgtgaag
tctttagaagatctttgctgtcattatgaccacactgttcgtaattcagtcggygacatt
gtacagtttaaatatggcggcgatggactggatcctactgacatggaagggaaagacaaa
cctttggatttcgcacgggtgtttagtcatgtacagtgtaatcacgtgatgcgccatgag
cgaccaatgcctcctcaaatgatacgtcaacgtgtcaacaaaatattagatggcgaagtc
ttcaaagattgcagcgatgactttaagggcgaagtcaagtcatatatggatggtcttata
aagaagattgatcagacgcagcaaagatatggactagactttgacccaaacaagcaaaag
ttctttgcattayctcatgcagtatttacgaacagaactaccaaacatcctaatcaaggt
aaaacctcatcatattttgttcgagatagcgaggtcatggattgttgtccaagtgaaggg
caacgttatcatccagagatgggacaagaggatatcactcttggagttcccaggatcaaa
garattataaacgcatcacgyaggattagtactcctatcatatcggcacagcttactaac
gacacagacgctgaccttgcgagagctgtgaaaggaagaattgagagaacattgctggga
gaggtaactgaatacatcgaggaggtctacacgcctgatagttgttatgtactcctgcrg
ctcgctttgagtagaatacgactgttaaagagtgtgtttgaccatttttcttttatttct
ctcactattcatttttttctcattcatctcattccaggcgtcaaaggtacagcgtgctca
tctaacaacacgatagaggtggaaagagtccttgggatagaagctgcaaggcaaactatt
atgaatgagattatttatacaatgaagaaccatggtatgagcattgatgtacgacatgtc
atgctattggctgaactcatggctttcaagggagaaatacttggcataacacggttcggt
ctcagtaaaatgaaggaaagcgtgctgatgttggcttcgtttgaaaagaccgctgaccat
ttgtttgaagccgctcttcacgggagaaccgactctatcgatggagtgagcgagtgcatc
atcatgggaatgcctatgtccgtggggactggaatcttcaaacttttacataagccgacc
aatcctaggaaaccttgcaggcgtcctatcatttttgacaacaaagaatttcacttgccg
ttgacgtcatgtaccacgtga
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