Candidatus Endoriftia persephone: L0Y14_06030
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Entry
L0Y14_06030 CDS
T08211
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
eps
Candidatus Endoriftia persephone
Pathway
eps00521
Streptomycin biosynthesis
eps00523
Polyketide sugar unit biosynthesis
eps00541
O-Antigen nucleotide sugar biosynthesis
eps01100
Metabolic pathways
eps01110
Biosynthesis of secondary metabolites
eps01250
Biosynthesis of nucleotide sugars
Module
eps_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
eps00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
L0Y14_06030 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
L0Y14_06030 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
L0Y14_06030 (rfbC)
Enzymes [BR:
eps01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
L0Y14_06030 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
USF88788
UniProt:
A0A9J7A1I9
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All DBs
Position
1317955..1318500
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AA seq
181 aa
AA seq
DB search
MRVTPTSIPDVLVIEPQIFGDSRGFFLESFNAKAFQQATGSDVRFVQDNHSRSQRNVLRG
LHYQIQQPQGKLVRVAQGAVFDVAVDIRRSSPSFGQWVGVELTEENHRQLWVPAGFAHGF
VVLSESADFLYKTTDYYAPEHERCIRWDDPEIGIEWPINADLQLSSKDKEGLLLRQAEVF
A
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtgacaccgacttcgattcctgatgtgctggtgatcgagccacagatctttggt
gacagccggggcttctttctcgagagcttcaatgccaaggcgtttcaacaagcgacagga
tcggatgtgagatttgtgcaggacaaccactcacgttcccagcgcaacgtcctgcgcggg
ctgcattatcagatccagcagccccagggcaagctggtgcgtgtagcccagggggcggtg
ttcgatgtggcagtggatatccgtcgatcctcccccagctttggccagtgggtgggggtg
gagctgaccgaagagaatcaccgccagctgtgggtgccggcaggtttcgcccacggcttc
gtggtgctcagcgagagcgcggacttcctctacaagaccaccgactactacgcccctgaa
catgaacgctgcatccgctgggatgacccggagatcggcatcgaatggccaataaatgct
gatctgcagctgtcgtcgaaagataaagaaggtctcttgctccgtcaggccgaggtgttt
gcatga
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