Enterobacter pasteurii: HWQ17_00735
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Entry
HWQ17_00735 CDS
T09666
Symbol
pdeR
Name
(GenBank) cyclic di-GMP phosphodiesterase
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
ept
Enterobacter pasteurii
Pathway
ept02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ept00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HWQ17_00735 (pdeR)
Enzymes [BR:
ept01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
HWQ17_00735 (pdeR)
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Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
PAS_10
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
QLA70298
LinkDB
All DBs
Position
complement(149663..151651)
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AA seq
662 aa
AA seq
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MDDLEQNLLFRYMGTHSPWWRLTADSNALHLAASENTDIIQVVALDDEQADLIRQLTVIT
SSIAMTLPLYGVEVPVHLVGRKINKSEWAGTASAWNDTPSVARDLAQGLSFAEQVVSEAN
SVIVILDQNGNIQRFNRLSEEYTGLKEQEVIGQNVFKLFMSRSEAAASKRNIAGFFRNGS
SYEVERWIKTRKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRVLANTDT
ITGLPNRNAIHELISDAISARGDGQVGVVYLDLDNFKKVNDAYGHMFGDQLLQAVALAIL
SCLDEGQTLARLGGDEFIVMATDTSQGALEAMASRILTRLRQPFRIGLIEVYTGCSLGIA
LAPQHGNDRESVIRNADTAMYTAKENGRGKFCVFSPEMNQRVFEYLWLDTNLRKALDNDQ
LLIHYQPKLTWRGEVRSLEALVRWQSPERGLIPPMEFISYAEESGLIVPLGRWVMLDVVR
QVAKWRDKGINLRVAVNVSARQLADQTIFSDLKQALKDLNFEYCPIDVELTESCLIENEA
LALSLIQQFSRLGAQIHLDDFGTGYSSLSQLARFPIDAIKLDQSFVRDIHKQSISQSLVR
AIVAVAQALNLQVIAEGVESAKEDAFLTKNGVNERQGFLFAKPMPAAAFERWLKRYQARH
VR
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggacgatctggagcagaacctgctgtttcgttacatgggtacccatagcccctggtgg
cgattaacagcagacagcaatgctctgcatcttgccgcaagtgaaaacaccgacattatc
caggttgttgcgctggatgatgaacaggccgatctgattcgccagctaaccgtgatcacc
tccagcattgccatgaccctgccgctgtacggtgttgaagtccccgttcatctggtgggc
cgtaaaattaacaaaagcgagtgggcgggaacggcatcagcatggaacgacacgccttcc
gtggcgcgcgatctggcgcagggactctccttcgccgaacaggtggtgtccgaggctaac
tccgtcattgtcatcctcgaccagaacgggaatatccagcgcttcaatcgcttaagcgaa
gagtatacgggcctgaaggagcaggaagttatcggacaaaacgtgtttaaactgtttatg
agccgcagcgaggccgccgcatcaaaacgcaatattgccggtttttttcgtaacggcagt
tcgtacgaagtcgaacgctggatcaagacccgcaagggccagcgcttgtttctgttcaga
aataagtttgttcacagcggcagcgggaaaaatgaaatcttccttatctgttcgggcacc
gacatcacggaagagcgtcgtgcccaggagcggctgcgcgttctcgccaatacggatacc
attaccggattgccaaaccgcaacgccattcatgagctgatctccgatgccatcagcgcc
cgtggtgacggacaggtgggtgtggtctatctagacctggataacttcaaaaaggtaaac
gacgcgtatggccacatgtttggcgaccagctgcttcaggccgttgcgctggcgatcctg
agctgcctggatgaagggcaaacgctggcgcgcctcggcggggatgagtttatcgtgatg
gccaccgatacgtcacagggcgcgctggaagccatggcgtcgcgtatcctgacccgcctg
cgccagcctttccgcattggcttgattgaggtgtatacgggctgctcgcttggtatcgcg
cttgcgccccagcacggtaacgatcgcgaaagcgtcattcgcaatgccgacaccgccatg
tataccgccaaagaaaatggccggggtaaattctgcgtattctcgccagagatgaaccag
cgcgtatttgaatatctctggctggataccaacctgcgtaaggcgctggataacgatcag
ctgctgatccactaccagcccaagctgacatggcgcggcgaagtcaggagcctcgaggcg
ctggtgcgctggcagtcgccagagcgtggcctgatcccgccgatggagttcatctcctac
gctgaagagtcaggactgattgtgccccttggccgctgggtgatgctggacgtagtgcgg
caggtggcaaagtggcgcgacaagggaatcaacctgcgcgtcgcggtcaacgtctctgcc
cgtcagctggcggaccagaccatattcagcgacttaaaacaggcgctgaaggatctgaat
tttgaatattgcccgattgacgtggagctaaccgaaagctgccttatcgaaaatgaagcg
ctggcgctctcgctcatccagcagtttagccgcctgggggcgcaaatccatctggatgac
ttcgggacgggatactcttccctgtcgcagctggcgcgattccctatcgatgcgattaag
ctcgatcagtcgttcgtccgggatattcacaagcaatccatttcacagtctctggtgcgg
gcgattgtcgccgtggcgcaggcgttaaacttacaggttattgccgaaggcgtggagagc
gcgaaagaagacgcctttctgacgaaaaacggcgtcaacgaacggcagggttttcttttt
gctaagcccatgcccgctgccgcgttcgagcgatggctaaagcgctatcaggcgcggcac
gtccgctag
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