KEGG   Eremothecium cymbalariae: Ecym_2205
Entry
Ecym_2205         CDS       T02237                                 
Name
(RefSeq) Hypothetical protein
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
erc  Eremothecium cymbalariae
Pathway
erc03020  RNA polymerase
erc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:erc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Ecym_2205
  09124 Replication and repair
   03420 Nucleotide excision repair
    Ecym_2205
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:erc03021]
    Ecym_2205
   03400 DNA repair and recombination proteins [BR:erc03400]
    Ecym_2205
Transcription machinery [BR:erc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     Ecym_2205
DNA repair and recombination proteins [BR:erc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      Ecym_2205
SSDB
Motif
Pfam: RNA_POL_M_15KD TFIIS_C zf-UBP CPxCG_zf
Other DBs
NCBI-GeneID: 11470548
NCBI-ProteinID: XP_003644771
UniProt: G8JP49
LinkDB
Position
2:404430..404798
AA seq 122 aa
MTTFRFCRDCNNMLYPREDKEEQRLLFECRTCTYAEEAGTPLVYRHELITNIGETAGVVQ
DIGSDPTLPRSDRECPKCHSHDNVFFQSQQRRKDTSMVLFFVCLSCSHIFTSDRKNKRTT
FS
NT seq 369 nt   +upstreamnt  +downstreamnt
atgacgacgtttaggttttgccgggactgtaacaatatgttgtatccccgcgaggataag
gaggagcagaggcttttgtttgagtgcagaacatgcacctatgcagaggaagcaggtacg
cctttggtttaccggcatgagttgattacgaatattggtgagactgcgggtgttgttcaa
gatattgggagtgatccgacgctaccgaggtcggatcgagagtgtcccaaatgccattcg
cacgataatgtatttttccagtctcaacagcggaggaaagataccagtatggttttgttt
tttgtatgtttgagttgttctcatatctttacgtctgatcggaagaataagaggactacg
ttttcgtaa

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