Encephalitozoon romaleae: EROM_100120
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Entry
EROM_100120 CDS
T03458
Name
(RefSeq) DNA-directed RNA polymerase subunit beta
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
ero
Encephalitozoon romaleae
Pathway
ero03020
RNA polymerase
ero03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ero00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EROM_100120
09124 Replication and repair
03420 Nucleotide excision repair
EROM_100120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ero03021
]
EROM_100120
03400 DNA repair and recombination proteins [BR:
ero03400
]
EROM_100120
Enzymes [BR:
ero01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EROM_100120
Transcription machinery [BR:
ero03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
EROM_100120
DNA repair and recombination proteins [BR:
ero03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
EROM_100120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
MlaD
Motif
Other DBs
NCBI-GeneID:
20564442
NCBI-ProteinID:
XP_009265327
UniProt:
I7AGE0
LinkDB
All DBs
Position
X:8829..12254
Genome browser
AA seq
1141 aa
AA seq
DB search
MESIFTKEHSWSIISSFFEQKGLVRQQLDSFDQFVRTKMQEVINENPAIIVQSAPTAGTE
IQKRITVRFGQIYVSKPPIYTESDGRTITVFPNEARIRDLTYASPLFIDVIKETVSELGV
VDKHKYSRVPFGSLPVMLRSSYCVLHGLGDKDLIDLGECPYDQGGYFIVNGSEKVIVAQE
RMASNTVYVFKKAQPATYTHYAEIRSVPEKSSRNPSTLSMKLCRSPGAIRVSLPLVKQDI
PLFVLYRALGFLSDKEIIDHILYEDDDEMFELLKESIEEGTVVQDQNVALDYIGKRSAPV
GTPQEKRITIARDLLAKEVLPHIGTQEFCETKKAYFIGYIVQRLLLVALGRRNPDDRDHY
GKKRMDLSGPLLASLFRTLFKKLCADTTRHMQKCIENGREFNIALGLKASIITQGFRYAL
ATGNWGDQAKAMQTRAGVAQVLNRYNFVSTLSHLRRVNTPIEKEGKLAAPRQLHNTHWGM
VCPAETPEGQACGLVKNLSLMAYISVGSSSGPLIEFLEECGVESLEEISTLQLSTATKVF
VNGVWVGIHSDPVYLIKSLKLLRRSLEIDKEVSIVRDIREKEIRIQSDAGRPCRPLMVVR
DNKLVITIEDIRKLRRGEIKWDNLIGEGFIEFLDVEEEEMSMIAMSTKVLNDECKNSSDV
KISYTHCEIHPALILGICASTIPFPDHNQSPRNTYQSAMGKQAMGIYATNFLLRMDTLSN
ILFYPQKPLVTTKSMEYLRFKELPSGQNALVAIACYSGYNQEDSIIMNQSAIDRGLFRSF
FYRTYTDQESMSRPGVNEEFCKPNRGSVLRMKNLNYNKLDEDGLISPGVRVTGDDVLIGK
ITPILDPERSTKEAPVYVYKDSSTAMRRTETGIVDTVIVTNKDGYKFSKVKIRSGRIPQM
GDKFASRHAQKGTIGITLRQEDMPFTSDGIVPDIIINPHAIPSRMTIGHLIECLLGKVSA
MSGEEGDATPFSGMSVNEISTRLKSYGFQQRGLEVMYNGMTGRKLRAQIFFGPTYYQRLK
HMVDDKIHARARGPLQILTRQPVEGRSRDGGLRFGEMERDCIISHGASAFLKERLMDVSD
AYSCYVCNLCGLLAMGGTKVNECKGCNNTTNVSMVEIPYAFKLLIQELMGMNIAPRIRFE
E
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atggagtctatattcacaaaggaacatagctggtcgataatatcttcattctttgagcaa
aaagggcttgttaggcagcagctagattcctttgatcagtttgttagaacaaagatgcag
gaagttatcaatgagaatccggcaataattgtccagtctgctcccactgcaggaactgag
attcaaaaaagaataacagttagattcgggcaaatatatgtttcaaagcctcctatctac
accgaatctgatggaaggacgattactgtgtttcccaatgaggctcgtataagagactta
acatatgcatctccattattcatcgatgtcataaaggaaacggtgtctgagctaggggtt
gttgacaaacataagtattcaagggttccttttgggtcattgccggtgatgctaagatcg
tcatactgcgtcctgcatggactaggggacaaggaccttattgatcttggagaatgccca
tatgaccaagggggatactttattgtgaatgggtctgagaaggttattgttgcccaagaa
cgaatggctagcaatactgtttacgtattcaaaaaggcacagcctgcaacatatacgcat
tatgcagaaatacgttctgttccggaaaaaagctctagaaacccaagcactttatctatg
aagctatgtagatctcccggggcgataagggtttctctgccattggttaagcaagacatt
cctctctttgttctgtatagagcactagggtttttatctgataaagagatcatcgaccat
attctttatgaagatgatgatgagatgtttgagcttttgaaggaaagtattgaggaaggg
acggttgtccaggatcaaaatgtagcattggattatataggaaagaggtctgcacctgta
ggaacaccacaagaaaaaaggataacaattgcaagagacctattagcaaaagaggttctt
cctcatattggaacccaagaattttgtgaaactaagaaggcatatttcattggatacatt
gtccaaagattattacttgtggcattaggaagaagaaatcccgatgacagagatcattac
ggaaagaagaggatggacctaagtggtccattgcttgcatctttattcaggaccttattt
aaaaagttatgtgcagatacaacaaggcatatgcaaaagtgtatagagaatggccgggag
tttaacatagctctcggattgaaagcaagcataatcacgcaaggattccgatatgctctg
gcaacgggaaattggggagatcaggcaaaagccatgcagaccagagctggggttgctcaa
gttctaaacagatacaattttgtctcaacactcagtcatttgaggagagtcaatacacca
attgaaaaggagggaaaattggcagcaccccgtcaacttcataatacacattggggtatg
gtttgccctgctgagacgccggaagggcaagcatgtggacttgtgaaaaatttatctcta
atggcatacatttctgttggatcatcctcagggccgttaatagagtttctggaagaatgc
ggagttgagtcacttgaggaaatatctactctacagctcagcacagcaaccaaggtcttt
gtcaacggtgtatgggttggaattcactctgaccctgtgtatctgataaaatcacttaag
ctgttgagacgaagccttgaaatagacaaagaggtcagtattgtcagagacattagagaa
aaggaaatcagaatacagtctgatgcaggaaggccttgcaggcccttaatggtcgttagg
gacaataagcttgtaatcacaatagaagatatcaggaaactaagaagaggagaaattaaa
tgggacaacctgattggagaaggatttattgagtttctggatgttgaggaggaagaaatg
tccatgatagcaatgagtactaaagtccttaatgacgagtgcaagaattcttctgacgtg
aagatatcctatacacactgcgagattcatccagcattaatactaggaatctgtgcctca
actattccgtttcctgatcacaatcagagtcctcgtaacacctaccagagtgctatgggt
aagcaagcgatggggatctatgcaacaaatttcctactaagaatggacaccttgagcaac
attctgttctatcctcaaaaacctcttgtaacaacaaaaagtatggaatacctcaggttc
aaggaactaccatctggccagaatgctctagttgcaattgcgtgctattctgggtacaac
caggaagacagtattatcatgaaccaaagtgctattgataggggtttattccgaagcttc
ttctacaggacatacaccgatcaagagtctatgtcaaggcctggagttaatgaagagttt
tgtaaacctaacaggggaagtgttttaaggatgaagaacctgaactataacaaactggat
gaagatggacttataagtcctggagtaagggtcacgggggatgatgttcttattggaaag
ataacgcctatactggatcctgaaagaagtactaaagaggcgcctgtatatgtttataag
gacagtagcactgcaatgcgtaggacagaaacaggaattgtcgacacggttattgttaca
aacaaggatggttataagttctctaaggtcaagataagatcgggaagaattcctcagatg
ggagacaaatttgcatcgagacatgcccagaaaggaactattggaattactttgaggcaa
gaagatatgccattcacctcggatggaatagttccagacataattataaacccccatgcc
attcccagtcgtatgactattggacatttgattgaatgcctccttggtaaggttagtgcg
atgagtggagaggaaggagatgcaacaccattcagtggaatgagtgttaatgaaatatcc
acgagactgaaatcttacggttttcagcaaagaggattagaagttatgtataatgggatg
actgggagaaagcttagagcccagatattctttggacctacatattaccaaaggctcaag
catatggttgatgataagatacatgctagagcacgcgggcctcttcagatacttaccaga
cagcctgttgaggggagatccagagatggagggcttcgatttggagaaatggaaagggac
tgcataatttctcatggcgcctcggcctttctaaaagagagattgatggatgtgagtgat
gcatattcctgttacgtttgtaatctttgtggacttcttgcaatgggaggaaccaaggtg
aatgagtgtaagggctgtaacaacaccacgaatgttagcatggttgagattccatatgcc
ttcaagctcttgattcaagaacttatgggaatgaacattgcacctcgaattcgctttgaa
gaataa
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