Erwinia rhapontici: LJN55_05060
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Entry
LJN55_05060 CDS
T08392
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
erp
Erwinia rhapontici
Pathway
erp00730
Thiamine metabolism
erp01100
Metabolic pathways
erp01240
Biosynthesis of cofactors
erp04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
erp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
LJN55_05060 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
LJN55_05060 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
erp03016
]
LJN55_05060 (thiI)
Enzymes [BR:
erp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
LJN55_05060 (thiI)
Transfer RNA biogenesis [BR:
erp03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
LJN55_05060 (thiI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
Diphthami_syn_2
tRNA_Me_trans
DUF2934
Motif
Other DBs
NCBI-ProteinID:
UDQ81231
LinkDB
All DBs
Position
1080953..1082401
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AA seq
482 aa
AA seq
DB search
MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVVRHWDNIEVRAKDENQR
AAIVAELTRIPGIHHVLAVEDRSYTDVHHIFEQVLEMNRERIEGKTFSVRVKRRGKHEFS
SQDVERYVGGGLNQHVATAQVQLNRPEVTVNLEIEDDRLILVTARYEGIGGYPIGTQEDV
LSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVRQVAHYLWKRYGSSHRVRFV
AINFEPVVGEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQALVTGEALGQVSSQTLTN
LRLIDNASDTLILRPLISHDKEHIIKIAREIGTEDFARTMPEYCGVISKSPTVKAVKAKI
EAEEQNFDFSILDRMVDEATNVDIRQIAEKTEEEVVEVETVASFSDNDVILDIRSNDEQD
ARPLALDGVEVKPLPFYKLGTQFGDLDQSKTWLLYCERGVMSRLQALYLHEQGFKNVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcattaagttattccctgaaattacgatcaaaagtcagtctgtacgcctg
cgctttatcaaaatcctcaccggtaacatccgcaacgttctcaaacattacgatgaaacc
ctcgccgtggttcgccactgggacaacatcgaagtccgtgccaaagatgaaaaccagcga
gcggcgattgtcgctgaactgacgcgcatccccggcattcatcatgtgctggcggtggaa
gaccgttcatacaccgatgtgcatcatatttttgagcaggttctggaaatgaaccgcgag
cgcattgaaggcaagacattcagcgtgcgtgtgaaacgccgtggaaagcatgagttcagc
tcgcaagatgtggaacgctacgtcggcggtggtctgaatcagcatgtcgcaacggctcag
gtccagcttaaccggcctgaagtgaccgtgaatctggaaattgaagacgatcgcctgatt
ctggtgactgctcgctatgaagggatcggtggttatccaatcggcacccaggaagatgtg
ttatcgctgatttccggtggttttgactccggcgtgtccagctatatgctgatgcgccgt
gggtgtcgcgtgcattattgcttctttaacctcggtggcgctgcccatgaaattggtgtt
cgccaggtggcgcactacctgtggaagcgttacggcagctcgcaccgcgtgcgttttgtc
gcgattaacttcgagccggtggtaggcgagatcctcgaaaaagtcgatgatggtcagatg
ggcgtggtgctgaaacgtatgatggttcgtgcggcatcgaaagtcgcagagcgctacggt
gttcaggcgctggtaacgggtgaggccttaggtcaggtatccagtcagacgctgaccaac
ctgcgtttgatcgataacgccagcgatacgctgatcctgcgtccgctgatctcacatgac
aaagaacacatcatcaagattgctcgtgaaatcggaacggaagatttcgcccggacgatg
ccggaatattgcggtgtgatctctaaaagcccgacagtgaaagccgttaaagcgaagatc
gaagctgaagagcagaattttgacttcagtattttggatcgtatggtggatgaagcgacc
aacgtcgatattcgccagatcgcggagaagacagaagaagaagtggtagaagtcgaaact
gtggcttctttctctgacaacgatgtgattctggatatccgctctaacgatgagcaggat
gcacgaccgctggcgctggatggcgtggaagtgaaaccgttgccgttctataaactgggg
acgcagtttggcgacctcgatcagagtaaaacctggttgctgtactgtgaacgtggcgtg
atgagccgcttgcaggcactctacctgcatgagcagggctttaaaaacgttaaagtgtat
cgtccttaa
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