Erwinia rhapontici: LJN55_21850
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Entry
LJN55_21850 CDS
T08392
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
erp
Erwinia rhapontici
Pathway
erp00071
Fatty acid degradation
erp00280
Valine, leucine and isoleucine degradation
erp00310
Lysine degradation
erp00362
Benzoate degradation
erp00380
Tryptophan metabolism
erp00410
beta-Alanine metabolism
erp00640
Propanoate metabolism
erp00650
Butanoate metabolism
erp00907
Pinene, camphor and geraniol degradation
erp00930
Caprolactam degradation
erp01100
Metabolic pathways
erp01110
Biosynthesis of secondary metabolites
erp01120
Microbial metabolism in diverse environments
erp01200
Carbon metabolism
erp01212
Fatty acid metabolism
Module
erp_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
erp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
LJN55_21850 (fadB)
00650 Butanoate metabolism
LJN55_21850 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
LJN55_21850 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LJN55_21850 (fadB)
00310 Lysine degradation
LJN55_21850 (fadB)
00380 Tryptophan metabolism
LJN55_21850 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
LJN55_21850 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
LJN55_21850 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
LJN55_21850 (fadB)
00930 Caprolactam degradation
LJN55_21850 (fadB)
Enzymes [BR:
erp01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
LJN55_21850 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
LJN55_21850 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
LJN55_21850 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
LJN55_21850 (fadB)
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
UDQ80018
LinkDB
All DBs
Position
4746239..4748425
Genome browser
AA seq
728 aa
AA seq
DB search
MLYQGETLSLDWLEDGIAELVFDAPGSVNKLDTQTVASLGEAISVLEQQPTLRGVLLTSR
KTAFIVGADITEFLSLFIAPEEKLTAWLGFANSIFNRLEDLPVPTVSAIRGYALGGGCEC
VLATDFRIATADTRIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIAAGKDIDGAQALK
VGLVDAVVAADKLDAAALSVLKEAISGRQPWRERRQCKLEALKLNKIEAAMSFTTAKAMV
MQTAGKHYPAPLTAVKTIEAAARLGRDEALKLETAAFVPLARSNEARALVGIFLNDQAVK
AKAKKLTRDVETPKQAAVLGAGIMGGGIAYQSAWKGVPVIMKDISDTSLTLGMNEAAKLL
NKQLVRGKIDGLTLAGVISTIQPTLHYTGFDRVDVVVEAVVENPQVKAAVLAETESHIRP
DTILASNTSTIPISQLAKALTRPENFCGMHFFNPVPRMPLVEVIRGEKTAESTIAKVVAW
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSLLLRDGADFRQVDKVMEKQFGWPMGPSWL
LDVVGIDTAHHAQRVMAEGFPQRMKKEYRDAIDILFEAKRYGQKNQQGFWRWETDNKGKA
KKVTDAETDRLLQSVCQPKRVFSDEEIIARMMIPMINEVVRCLEEGIIASPAEADMALVY
GLGFPPFHGGAFRYLDTLGSDQFVAQAEPLTVLGPLYHLPDGLRDKAAQGGSWYPLAVPL
NDLSLKTA
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaggcgaaaccctatccctcgactggctggaagacggcatagccgaactg
gtttttgatgcgcccggctcggtgaacaagctggatacacagacggttgccagcctcggt
gaagctatctcggtgctggaacagcaacccaccctgcgcggcgttctactaacctcgcgc
aaaacggcctttatcgtcggtgccgatatcacggaattcctctcactgtttatcgccccg
gaagaaaaactgacagcatggctgggctttgctaatagcatctttaatcggctggaagat
ttgcctgtccccaccgtttcggccatccgtggttatgcattgggtggcggatgcgaatgc
gtgctggcaacggatttccgtatcgcgactgccgatacccgcattggcctgccggaaacg
aagcttggcatcatgccaggtttcggcggttccgtgcgcctgccacgtctgctgggagct
gacagtgcgctggagattattgccgcaggtaaagatattgatggcgctcaggcgctgaaa
gtgggtctggtagatgctgtcgtggctgcggataaactggatgccgccgcattatccgtg
ttgaaagaagctatctccggccgacagccgtggcgggaacgccgccagtgcaagctggaa
gcgctaaaactgaataaaatcgaagccgcaatgagtttcaccacggccaaagctatggtg
atgcaaaccgccgggaaacactatccggccccactgaccgccgtgaaaaccattgaagcc
gccgcacgtctgggacgtgatgaagcactgaaactggaaacggctgcgtttgttcccctg
gcacgatcgaatgaagcccgtgccctggtcgggattttccttaacgatcaggcggtgaaa
gccaaagcgaagaaactgacccgcgacgtcgaaacgccaaaacaggccgccgtgctgggt
gccggcatcatgggcggcggcatcgcttatcagtccgcctggaaaggcgtgccggttatc
atgaaagatatcagcgacacatcgctgacgctggggatgaatgaagccgcaaaactgctg
aataagcagctggtacgcggcaagattgatggtctgacgctcgcaggagtcatcagcacc
attcaacccacgcttcactatacggggttcgatcgggttgatgtggtagtagaagcggta
gtagaaaatccgcaggtgaaagcggccgtactggccgaaacagaaagtcacattcgcccg
gatacgattctggcatcgaacacctcgaccattcccatcagccagcttgctaaagcactc
acccgcccggaaaatttctgcggtatgcacttcttcaacccggtgccccgtatgccactc
gttgaggttatccggggagaaaaaaccgctgaaagcaccatcgccaaagtggtggcctgg
gccagcaaaatgggcaagacaccgattgtcgtcaatgactgtccaggattctttgtgaac
cgcgtgctgttcccctacttcgctggcttcagtctgctgctgcgcgacggcgccgacttc
cgtcaggttgataaggtgatggaaaaacagttcggctggccaatgggcccctcgtggctg
ctggatgtggtaggcatcgatacagcgcatcatgcgcaacgcgttatggcagagggcttc
ccgcaacgtatgaagaaagagtaccgggatgccatcgatatcctgtttgaagcaaaacgc
tacggccagaaaaaccagcaaggattctggcgctgggaaaccgacaataaaggtaaagcg
aaaaaggtgacggatgccgaaaccgatcgtttgttgcagagcgtgtgccagcctaaacgc
gtgttcagcgatgaggaaattatcgcgcgcatgatgatccccatgattaacgaagtggtt
cgctgtctggaagaaggcattattgccagtccggcggaagccgatatggcgctggtgtac
ggccttggcttcccaccgttccacggcggcgcgttccgctatctggacacccttggcagc
gatcagtttgttgctcaggctgaaccgctcactgtactcggtccgctttatcatctgccg
gacgggttacgggataaggcagcgcagggcggaagctggtatccgctggcggttcccctg
aatgatctctctttgaaaacggcgtga
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