Escherichia ruysiae: OSH18_13620
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Entry
OSH18_13620 CDS
T09019
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
eruy
Escherichia ruysiae
Pathway
eruy00540
Lipopolysaccharide biosynthesis
eruy01100
Metabolic pathways
eruy01250
Biosynthesis of nucleotide sugars
Module
eruy_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
eruy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
OSH18_13620 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
eruy01005
]
OSH18_13620 (rfaD)
Enzymes [BR:
eruy01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
OSH18_13620 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
eruy01005
]
Core region
OSH18_13620 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
WGM51297
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Position
complement(2841106..2842038)
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AA seq
310 aa
AA seq
DB search
MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQI
MAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATY
GGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGS
MASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSGIFNLGTGRA
ESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVT
EYMAWLNRDA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgttaccggcggcgcgggctttatcggcagcaacatcgttaaggccctgaat
gataaaggcatcaccgatattctggtggtggacaacctgaaagacggcaccaagtttgtg
aacctggtggatctgaatatcgcggactatatggataaggaagacttcctgatccagatt
atggctggcgaagagttcggcgatgtcgaagcgattttccacgaaggcgcgtgctcatcc
accaccgagtgggatggcaagtatatgatggataacaactatcaatactccaaagagctg
ctgcactactgcctggagcgcgaaattccgttcctgtatgcatcttccgcagcgacctat
ggcggacgcacctccgactttattgaatcccgcgaatacgaaaaaccacttaacgtctac
ggttactcaaaattcctgtttgatgaatatgttcgtcagattctgccagaagcgaactcg
cagattgttggtttccgttatttcaacgtttatgggccgcgtgaaggtcataaaggcagc
atggcgagcgtcgctttccatctcaacactcaacttaacaacggtgaatcaccgaagctg
ttcgaaggtagcgagaacttcaaacgcgacttcgtctacgtgggcgacgtggcagatgtg
aatctgtggttcctggaaaatggcgtttccggcatcttcaacctcggcactggtcgtgct
gaatccttccaggcagtagcagatgcaacactggcttatcacaagaagggtcagatcgaa
tacattccgttcccggataaactgaaaggccgctatcaggcgtttactcaggcggatctg
actaatctgcgcgcggcgggttacgacaaaccgttcaaaaccgttgctgaaggtgtaacg
gaatatatggcctggctgaatcgcgacgcgtaa
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