Erwinia sorbitola: GN242_17040
Help
Entry
GN242_17040 CDS
T06366
Symbol
ldcC
Name
(GenBank) lysine decarboxylase LdcC
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
erwi
Erwinia sorbitola
Pathway
erwi00310
Lysine degradation
erwi01100
Metabolic pathways
erwi01110
Biosynthesis of secondary metabolites
erwi01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
erwi00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
GN242_17040 (ldcC)
Enzymes [BR:
erwi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
GN242_17040 (ldcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QGU88821
UniProt:
A0A6I6EQ03
LinkDB
All DBs
Position
complement(3731824..3733974)
Genome browser
AA seq
716 aa
AA seq
DB search
MNIIAIMGPHNAFYKDEPIRELDITLKSQGFQTIYPHDASDLLKLIEHNPRICGVVFDWD
EYSLDLCSEINLLNEYLPLYAFINTHSTMDVSINEMRMTIWFFEYALNAADEIAQRIRQY
TDEYIDTITPPLTKALFTYVKEGKYTFCTPGHMAGTAFQKSPVGSLFYDFFGANALKADI
SISVTELGSLLDHTGPHLEAEEYVARTFGAEQSYMVTNGTSTSNKIVGMYAAPAGSTMLV
DRNCHKSLTHLLMMSDIIPIWLKPTRNALGILGGIPKREFTKESIALKVAQTPRASWPVH
AVITNSTYDGLLYNTQYIKETLDVPSIHFDSAWVPYTNFHPIYQGLSGMSGERTPGKVIY
ETQSTHKLLAAFSQASLIHIKGDYDEQTFNEAYMMHTTTSPNYAIVASIETAAAMLRGNP
GKRLINRSVERALHFRREVQRLREESEGWFFDIWQPEGVDEPECWPIQPGEEEWHGFRDA
DADHMYLDPIKVTILTPGMSELGEMAEEGIPAALVAKFLDERGVVVEKTGPYNLLFLFSI
GIDKTKAMSVLRGLTEFKRSYDLNLRVKNMLPDLYAEDPDFYRNMRIQDLARGIHTLIRQ
HDLPRLMLQAFATLPEMKLTPHHMFQQQVKGNIETVDISELVGRVSANMILPYPPGVPVV
MPGEMITEQSRAVLDFLLMLCAIGKHYPGFETDIHGAKLTDEGQYLVRVLKNDVEI
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
ttgaatattatcgcgatcatgggaccgcataacgcattctacaaagatgaacccatccgt
gagctggatatcactttaaaaagccagggctttcagacgatctacccgcacgacgccagt
gacctgctgaagctgattgaacataatccacgtatctgtggtgtcgtgtttgactgggat
gagtacagcctcgatctatgcagtgaaatcaatctgctcaacgaatatctgccgctgtat
gcctttatcaacacgcactcaacgatggatgtcagcattaatgaaatgcgcatgaccatc
tggttctttgaatatgccctgaacgccgccgatgagatcgcccagcgcatacgtcagtac
accgatgaatatattgataccattacgccccccctgacgaaggcgctgttcacctatgtg
aaagagggcaaatacaccttctgcacgcctggacatatggcgggaaccgcattccagaaa
agcccggtcggcagtctgttttatgattttttcggagccaatgccctgaaggcggatatc
tcgatttccgtcactgaactgggttcgctgcttgatcacaccgggccacacctggaagcc
gaagagtatgtcgcgcggactttcggtgccgagcagagctatatggtcaccaatggcacc
tcgacctccaataaaattgtcggcatgtacgctgccccggcgggcagtacgatgctggta
gatcgtaactgccataagtcgctcacccacctgttaatgatgagcgatattattcctatc
tggctgaagccaactcgtaatgcgctgggtattcttggcggcatcccgaaacgtgagttc
accaaagagagtattgcgctgaaagtggcgcaaacacctcgcgccagctggccggtgcat
gcggtgatcaccaactctacctacgacgggctgctgtacaatacgcagtacattaaagag
acgctggatgtgccatcaattcactttgattctgcctgggtaccctataccaacttccat
ccaatttatcaggggctgagtggcatgagcggggagcgcacgccgggtaaggtgatttac
gaaacccagtcgacgcataaactgctggctgcattctcgcaggcctcgctgatccacatt
aaaggcgactacgacgaacagacctttaatgaagcctacatgatgcacaccaccacctca
cctaactatgcgattgttgcttctatcgaaacggcggcggctatgctgcgcggtaacccg
ggtaagcgtttaatcaaccgttcggtagagcgggcgctgcattttcgtcgtgaagttcag
cgcctgcgtgaagagtctgaaggctggttctttgatatctggcagccggaaggcgtggat
gagccggagtgctggccgatccagcccggtgaggaagagtggcacggtttccgtgatgcc
gatgcggatcatatgtacctcgatccgatcaaagtcaccatccttacacccgggatgagc
gagctgggcgagatggcagaagaggggatcccggcggcgctggtggcgaaattcctcgac
gagcgcggcgtagtggtggaaaaaaccgggccgtacaacctgctgttcctgttcagcatc
ggtattgataaaaccaaagcgatgagcgtgctgcgcggtctgaccgagtttaaacgctcc
tatgacctcaatcttcgcgtgaaaaacatgttgccggatctctatgcagaagatcctgat
ttctaccggaatatgcgtattcaggatctggcccgggggatccacacgctgatccgccaa
cacgatttaccgcgcctgatgttacaggcctttgccacactgccagagatgaagctgacg
ccgcatcatatgttccagcagcaggtaaaaggcaatatcgaaacggtggatatcagtgaa
ctggtggggcgcgtctcggccaatatgatcctgccttatccgccaggcgtaccggtggtg
atgcccggtgagatgatcactgaacagagccgtgccgtgctcgactttttgctgatgctg
tgtgccataggtaaacactatccgggctttgaaacagatattcatggcgcgaagcttacc
gatgaagggcagtatctggtacgcgtgttgaaaaatgacgtagagatttaa
DBGET
integrated database retrieval system