Eriocheir sinensis (Chinese mitten crab): 126981194
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Entry
126981194 CDS
T08870
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
esn
Eriocheir sinensis (Chinese mitten crab)
Pathway
esn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
esn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126981194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esn03019
]
126981194
Enzymes [BR:
esn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
126981194
Messenger RNA biogenesis [BR:
esn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
126981194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
AAA_16
CbiA
ATP_bind_1
AAA_33
AAA_22
AAA_10
nSTAND3
AAA_24
Motif
Other DBs
NCBI-GeneID:
126981194
NCBI-ProteinID:
XP_050687899
LinkDB
All DBs
Position
47:178342..185587
Genome browser
AA seq
420 aa
AA seq
DB search
MAEKEFKLDHDCELRFEVESKKDTVELKLTSGKAEVFGTELAPDKPYTFFPGAKVAVYTW
HGCGLKLTGATEGTYVAKETPMVMYLNTHACLERLRKHADEGLGRGEETRGPVTMVVGPG
AVGKSTLCRILLNYAVRMGRRPIFVDLDVGQGAISIPGTIGALLVERAASVGEGFSQEAP
LVYNFGHLSPASNPTLYNILVSRMAATVQEKMARNRKVAASGVVINTCGWVKDEGYKSLT
HVAQAFEVDVIIVLDQERLYNELVRDIPFIKVVFLPKSGGVVEGTQAMRASSRDDRIREY
YYGLHTKYHPHSFEVKMSHFQIYKIGAPALPDSCMPADMKVDDHMTKLVPVEPGVKLKHH
ILAVSLATDPEELLTSNVAGFICVLEVDEENKLVKVLSPQPKPLPKTIYILTDVQFMDSS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaaggagttcaagctggaccatgactgtgagctgcgctttgaggtggagagc
aagaaggatacggtggagctaaagttgaccagcggcaaggcggaggtgtttggcactgag
ctggcacccgacaagccctacaccttcttccccggtgccaaggtggctgtctacacctgg
cacggctgcggcctcaagctgaccggcgccacagaggggacttatgtggccaaggagacg
cccatggtgatgtacctcaacacccacgcttgcctggagcggctgaggaagcacgctgac
gagggtctggggcggggcgaggagacccgcggccccgtcaccatggtggtcggccctggt
gcggtgggcaagtccacactctgccgcatcctcctcaactacgccgtgcggatggggcgg
cggcccatctttgtggacctggatgtgggccagggggccatctccatacctgggaccatt
ggcgccctgctggtggagcgcgcggcctcggtgggtgaagggttctcccaggaggcgccg
ttggtctacaactttgggcacctgtcccccgccagcaaccccacgctgtacaacatcctg
gtgtcccgcatggcagccaccgtgcaggagaagatggccaggaacaggaaggtggctgca
tcgggcgtggtgatcaacacgtgtggctgggtgaaggacgaggggtacaagagcctgacc
cacgtggcgcaggcgtttgaggtggacgtgatcatcgtgctggaccaggagaggctgtac
aatgagctggtgcgagacattcccttcatcaaggtcgtcttcctacccaagagtggcggg
gtcgtggagggcacccaagccatgcgcgcctcctcccgtgacgaccgcatccgagagtac
tactacggcctgcacaccaagtaccacccccacagctttgaggtcaagatgtcacacttc
cagatatacaagatcggggccccagcgctgccagactcctgcatgccagcggacatgaag
gtggatgaccacatgaccaagctggtgcctgtggagccaggcgtgaagctgaagcaccac
atcctcgctgtcagcctggccaccgaccccgaggagctgctcacctccaacgtggccggc
ttcatctgcgtgctggaagttgacgaggagaacaagttggtcaaggtcctctcgccccag
cccaagcccctgcccaagaccatctacatattgacagacgtacagttcatggactcctcg
tag
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integrated database retrieval system
