Eriocheir sinensis (Chinese mitten crab): 127002566
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Entry
127002566 CDS
T08870
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1-like
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
esn
Eriocheir sinensis (Chinese mitten crab)
Pathway
esn03020
RNA polymerase
esn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
esn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
127002566
09124 Replication and repair
03420 Nucleotide excision repair
127002566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esn03021
]
127002566
03400 DNA repair and recombination proteins [BR:
esn03400
]
127002566
Enzymes [BR:
esn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
127002566
Transcription machinery [BR:
esn03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
127002566
DNA repair and recombination proteins [BR:
esn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
127002566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
EutB
Motif
Other DBs
NCBI-GeneID:
127002566
NCBI-ProteinID:
XP_050724607
LinkDB
All DBs
Position
2:30752371..30765695
Genome browser
AA seq
1915 aa
AA seq
DB search
MAMESKAPLRHARRVQFGILSPDEIRRMSATEGGIKYSEVYENGRPKLGGLMDPRQGCID
RNTRCTTCAGNMTDCPGHFGHLDLAKPVFHVGFLTKTMKILRCVCFYCSKLLFNAQYPKI
REIVTKSKGQPRKRLQHVYNLCKGKMICEGGDEIDVNKDGDDPNMAKKSAGHGGCGRYQP
NIKRVGLELVAEWKHVNEDTQERKQILTAERVFEIFKHISDEECYLLGMDPKYARPDWMI
MTVLPVPPLPVRPAVVMHGSARNQDDLTHKLADIIKANNELIRNEQAGAAAHIIVENLKM
LQFHVATLTDNDMPGMPRALQKSGRPLKAIKARLKGKEGRIRGNLMGKRVDFSARTVITA
DPNLRIDQVGVPRSIAQNLTYPEIVTPFNMTKMMELVKRGNNQYPGAKYIVRDNGARIDL
RYHPKPSDLHLQCGYKVERHITDGDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSVT
SPYNADFDGDEMNLHVPQSMETRAEIENLHVTPRMIITPQANKPVMGIVQDTLTAVRKMT
KRDVFLEKQEMMNLLMFLPIWDGRMPQPAILKPKPLWTGKQLFSLIIPGNLNLIKTHSTH
PDDEDDGPYEWISPGDTKVLVEHGELIMGILCKRTLGASSGSMLHVAWMELGHEIAGRFY
GNIQTVVNNWLLLEGMSIGIGDTISDPSTYKVIQETIRKAKEDVIEVIHKAHNDELEPTP
GNTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIACVG
QQNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGLID
TAVKTAETGYIQRRLIKAMESVMVNYDGTVRNSVSQVIQLRYGEDGLAGEYVEFQKMPTV
KQSNRRFEEHYRFDVTNERYLRRLFNEDVVRELIGSPEAISILEGEWQKLQEDRVGLRQV
FTKGDTKVVLPCNLERMIWNVQKIFHINKRTPTDLSPVRVVEGVREMLIKCNIVSGEDRI
SLQANENATFCFQCLVRSTLCTKKVAEEYKLTTESFNWLVGEIETRFHQAIAAPGEMVGA
LAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLIGASAR
DAEKAKNVLCRLEHTTLRKVTSNTAIYYDPDPQNTCITEDQEFVNVYYEMPDFDVSRISP
WLLRIELDRKKMTDKKLTMEQISQKINSGFGDDLNCIFNDDNAEKLVLRIRIIVGDDKLG
DDAEEQVDKMEDDTFLRCIEANMLNDLTLQGIEAITKVYMHLPQTDEKKRIIINDQGEFK
AIAEWLLETDGTALMKVLSERDVDPVRTTSNDILEVFEVLGIEAVRKCIEKEMNAVLMFY
GLYVNYRHLALLCDVMTSKGHLMAITRHGINRQDTGALMKCSFEESVDVLMEAASCAEVD
PIRGVSENIMLGQLPKIGTGSFDLVLDDGKCKLGMEIPMPGSGMMMGGGIFGAASPPSGM
TPAQTPWASGATPSMSPYGAWTPGVGSGMTPGGPSFSPAAASETTGLSPGYSPAWSPQPG
SPGSPGGVSPYYPSPAPLSPSYSPSSPAYQPTSPTMTPASPGYSPTSPTYSPTSPQYSPT
SPQYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY
SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYAPNYSPSSPGY
SPTSPSYSPTSPSYSPTSPQYSPASPSYSPSSPKYSPTSPNYSPTSPTYSPGSPSYSPTS
PKYSPTSPTYSPTSPSYSPSSPKYSPTSPNYSPSSPKYSPTSPTYSPSSPQYSPSSPKYS
PTSPTYSPSSPKYSPTSPTYSPTTPGYSPTSPLYSPSYEEEEEEQRRKAKKKSKR
NT seq
5748 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggagagcaaagcacctctgcggcatgcccgtagggtgcagtttggtatcctc
agtcctgatgagattcgccggatgtcagcgacagaaggaggaattaagtactccgaagtg
tatgagaatgggcggcccaagctaggagggctgatggacccccggcagggctgcattgac
aggaacactcgctgcaccacctgtgccggcaacatgactgactgtcctggacactttggt
cacctggacctagctaagccagtgtttcacgttggctttcttaccaagaccatgaagatt
ctaagatgtgtttgcttttattgtagcaagctgctcttcaatgctcaataccccaagatc
cgtgagattgtaacaaagtcaaaaggtcagcctaggaagaggctgcagcacgtttacaat
ctttgcaaagggaagatgatctgtgagggtggagatgagatagatgtcaacaaggatggc
gacgaccccaacatggcaaagaagtctgcaggccatggcgggtgtggccgttaccagccc
aacattaagcgagtgggcctggagctggtggctgagtggaagcacgtcaacgaggacaca
caggaacgcaagcagatcctcactgcagaacgtgtctttgagatcttcaagcacatctca
gatgaggagtgctacctcttgggcatggatcccaagtatgcccgtcctgactggatgatc
atgactgtcttgccggtaccgccacttcctgtgcgtcccgctgtggtgatgcatggctca
gcccgtaaccaggatgatctcacgcacaaactggcagacattatcaaggccaataatgag
ctgattcgcaatgagcaagctggtgctgccgcccacatcattgtggagaaccttaagatg
ctacagttccatgtggccacactaacagacaatgacatgcctggcatgcccagggcacta
cagaaatctggacgacccttgaaggctattaaagctcgtctgaaggggaaggaaggtagg
atccgtggtaaccttatgggaaagcgtgtggacttttctgcacgtactgtcatcacagct
gatcccaacctgcgtattgatcaggtcggggtgccaagatccattgctcaaaacctcacc
tacccggagattgtgacacccttcaacatgaccaaaatgatggaattggtgaagcgaggc
aacaaccagtaccccggtgccaagtacattgtgcgtgataatggggcgcgcattgacctc
cgctaccaccccaagccttcagatcttcacctgcagtgtggctacaaggtcgagcgacac
atcactgacggagacctcgttatcttcaaccgtcaacccacactgcataaaatgtccatg
atgggccacagagtgaaggttttgccatggtcaaccttccgtatgaacttgtctgtgaca
tcaccatacaatgctgactttgacggagatgagatgaacctccatgtgcctcagagcatg
gagactcgggcagaaatagagaacctccacgttacaccccgcatgatcatcactcctcag
gccaacaagccagtcatgggtattgtgcaggacacacttacagctgtcagaaagatgacc
aagagggacgtgtttctggagaagcaagagatgatgaacttgctgatgttcttgcccatt
tgggatggtcgcatgcctcagccagccattctgaaacccaaaccattgtggacaggaaag
cagctcttttcactcatcattcccggtaatctcaaccttatcaagactcattctactcac
cctgatgacgaagatgatggcccatatgagtggatatctcctggtgacacaaaggtgctg
gtagaacatggagaactaatcatgggtatattgtgcaagagaacccttggggcctcatct
ggatctatgttgcacgttgcttggatggagttgggacatgaaattgctggcagattttat
ggtaacattcagactgtagtcaacaactggctgctgctggagggtatgagcattggtatt
ggagacaccatttctgacccttccacctacaaagtcatccaggaaaccattcgcaaggcc
aaggaagacgtgatagaggtgatccacaaggctcacaacgatgagcttgagcccacacca
ggtaacaccttgaggcagaccttcgagaaccaggtgaaccgaatcctcaacgatgctcga
gacaaaactggtggatcagccaagaagtcattgactgagtataacaatctgaaggctatg
gtggtgtctgggtcaaaaggctccaacattaacatctctcaggttattgcctgtgtggga
caacagaacgttgaaggtaagagaattcccttcggcttcaggaaaaggacactccctcac
ttcatcaaagatgattacggtcctgagtccagaggctttgtagaaaactcgtaccttgcc
ggactgactccttcagagttttacttccacgccatgggaggtcgtgagggtctcattgat
actgctgtaaagactgcagaaacaggttacatccagcgacgactgatcaaggctatggaa
agcgtaatggtaaactatgatggcactgtgaggaacagtgtgagtcaggtgattcagctc
aggtatggagaagatggtctggctggtgaatatgtggagtttcagaagatgcccactgtc
aagcagtccaaccggcgctttgaagaacactatcggtttgatgtcactaatgagagatac
cttcggaggctgttcaatgaagatgttgtgcgggagctgataggatctccagaagccatc
agcatcctggaaggagagtggcagaagcttcaggaggacagagttgggctccggcaagtg
ttcaccaaaggagacacaaaggtggtgctgccttgtaacctggagcgaatgatttggaat
gtgcagaaaatcttccacatcaacaagcgcacccccacagacttgtccccagtcagagtg
gtggagggagtgagggagatgttgatcaagtgtaacatcgtgagtggagaagacagaatt
agtttacaggccaacgaaaacgccacattttgcttccagtgcttggtacgatccacactg
tgcaccaaaaaggttgcagaagagtacaagctgaccacagaatcgttcaactggcttgtt
ggtgaaatagaaacaagattccaccaggctattgctgctcccggagaaatggtgggtgcc
cttgctgcccagtcccttggtgagccggccacccagatgacactgaacactttccatttt
gctggtgtgtcatccaagaacgtaacccttggtgtgcccaggctcaaggaaatcatcaac
atcagcaagaagcccaaagctccctcccttaccgtgttcctgatcggtgcttcggccagg
gacgctgagaaggccaagaatgtcctctgccgtctggagcacaccacactgcgcaaggtg
acatcaaatacagctatctactatgatccagacccccagaacacctgtatcaccgaggac
caggagtttgtcaatgtgtactatgagatgcctgactttgatgtgtccaggatatcgcct
tggctcctccgcattgaactggacaggaagaagatgacagataaaaaactgacaatggag
cagatttctcagaagatcaactcaggatttggagatgatttgaactgcattttcaatgat
gacaatgccgagaaacttgtgctccgaatccgtattattgtgggcgacgacaagctggga
gacgatgctgaggagcaggtggacaagatggaagatgacactttcctgaggtgtattgag
gccaacatgttgaatgacttgactctgcaaggcattgaggccatcaccaaggtgtacatg
cacttgccgcagactgatgaaaagaagcgcatcatcatcaacgaccagggagagttcaaa
gctatcgccgagtggctcttggaaactgacggcaccgccctcatgaaggtgctctcagaa
cgggatgtggaccctgtgcgtaccacctccaacgacatcttagaggtgtttgaggtgctt
ggcattgaggctgtcaggaaatgtattgagaaggagatgaatgctgtgctaatgttctat
ggtctgtacgtgaactaccggcaccttgccttgctgtgtgacgtgatgaccagcaagggt
cacctcatggccatcactcgccacggcatcaacaggcaggacactggcgccctcatgaag
tgttccttcgaggagtctgtggatgtgctgatggaggctgcatcctgtgctgaggtggac
cccatccgaggtgtgtctgagaacattatgcttggacaacttccaaagattggcactggt
tcctttgatctggtgctggatgatggcaagtgcaagctgggcatggagatccccatgcct
gggtctggcatgatgatgggtggtggcatatttggtgcagcatcaccaccatcaggcatg
acccctgcccagactccatgggcatcaggagcaacaccctccatgtctccatatggtgcc
tggacccctggtgtgggcagtggcatgaccccaggtggtccatccttctcccctgctgca
gccagtgaaactactgggttatcaccaggttactccccagcctggtcccctcagcctggc
agtcctggctcccctggtggagtcagtccttactatccaagccctgctcctctgtctcct
tcatactcaccatcttcccctgcctaccagcccacatccccgaccatgacacctgcctcc
ccagggtactccccaacctccccaacatacagtcccaccagtccccagtactctccaacc
tcaccccagtactctcccaccagcccatcctactcccccacctctccttcatacagcccc
acttccccttcatattcccccacctcaccatcctattccccaacctcaccatcctacagc
cccacctccccctcatactccccaacctctccatcttattcaccaacctcaccctcctac
tcccctaccagtccatcctactccccaacttctccaagctacagccccacctccccctct
tactctcccacctcaccctcatactcacccacttccccctcttactccccaaccagtcct
tcctactccccgacatcacccagctatgcccccaactactccccatcatcaccagggtat
tcaccaacaagtccatcctactccccaacaagcccctcctactcccccacatcaccccag
tactccccagcctccccctcttactccccatcctctccaaagtactcccccaccagcccc
aactactccccaacaagccctacctactctccagggtcaccttcatactcccccacatca
cccaagtactccccaaccagccccacttactcccccacctccccttcatattccccatcc
tcgcccaaatactcaccaacttcccccaactattcaccctcctcccccaagtactccccc
acctcccccacctacagtccatccagtccccagtacagcccgtcaagtcccaaatactcc
ccaacctccccaacttacagccccagcagccccaagtactccccaaccagtcccacctac
agccccaccacccctggctacagccccacctcgcccctctactccccgagctacgaggag
gaggaggaggagcagcggcgcaaggcgaagaagaagtccaagcgttaa
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integrated database retrieval system
