Eriocheir sinensis (Chinese mitten crab): 127006180
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Entry
127006180 CDS
T08870
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1-like
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
esn
Eriocheir sinensis (Chinese mitten crab)
Pathway
esn03020
RNA polymerase
esn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
esn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
127006180
09124 Replication and repair
03420 Nucleotide excision repair
127006180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esn03021
]
127006180
03400 DNA repair and recombination proteins [BR:
esn03400
]
127006180
Enzymes [BR:
esn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
127006180
Transcription machinery [BR:
esn03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
127006180
DNA repair and recombination proteins [BR:
esn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
127006180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
RNA_pol_Rpb1_3
EutB
Motif
Other DBs
NCBI-GeneID:
127006180
NCBI-ProteinID:
XP_050731689
LinkDB
All DBs
Position
32:complement(13604809..13613334)
Genome browser
AA seq
1272 aa
AA seq
DB search
MGILCKKTLGASSGSMMHLAWMELGHEIAGRFYGNIQTVVNNWLLLEGHSIGIGDTISDP
NTYRVIQDTIRKAKEDVIDVIHKAHNDELEPTPGNTLRQTFENQVNRILNDARDKTGGSA
KKSLTEYNNLKAMVVAGSKGSNINISQVIACVGQQNVEGKRIPFGFRKRTLPHFIKDDYG
PESRGFVENSYLAGLTPSEFYFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVNYD
ATVRNSVGQVIQLRYGEDGLAGEFVEFQSLPVIKLSHRRFEDNYRFDLTNERYLRKVYTE
GVVREIIGSPVAISTLEEEWRQLQEDRVALRQIFPKGDTKVVLPCNLERMIWNVQKIFHI
NKRSPSDLSPVKIVQSVNEMLARCVIVSGEDPISRQANANATLLFQCLVRSTLCTKKVAE
DHRLSAEAFNWLIGEIETRFSHALASPGEMVGALAAQSLGEPATQMTLNTFHFAGVSSKN
VTLGVPRLKEIINISKRPKAPSLTVFLTGAAARDAEKAKNVLCRLEHTTLRKVTSNTAIY
YDPDPQNTVVSEDQEFVNVYYEMPDFDVSRISPWLLRIELDRKKMTDRKLTMEQISQKIN
SGFGDDLNCIFNDDNAEKLVLRIRIIVGDDKLGGSDDHEEQVDKMEDDTFLRCIEANMLN
DLSLQGVDSISKVYMHLPQTDEKKRILINETGEFKAVAEWLLETDGTALMTVLSERHVDP
IRTTSNDILEVFTVLGIEAVRKCIEKEMNAVLMFYGLYVNYRHLALLCDVMTSKGHLMAI
TRHGINRQDTGALMKCSFEESVDVLMEAAAAAEVDPVRGVSEAIMLGKLPRLGTGAFQLL
LDDEKCKLGMEVPLPGMLMSMPALPSASPATSPTTHTPAHTPWTSASTPVMSPYGGWTPG
GGGMTPGGPAFSPTPTLDTPGYSPAWSPQPGSPGSPAPSPYYPSPSPALSPSYCPSSPAY
QPTSPSLTPASPGYSPTSPTYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS
PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS
PTSPSYSPTSPSYAPNYSPSSPGYSPTSPSYSPTSPSYSPSSPQYSPASPTYSPTSPKYS
PSPKYSPTSPTYSPTSPSYSPTSPKYSPTSPTYSPTSPSYSPTSPKYSPTSPTYSPTSPS
YSPTSPSYSPTSPTYSPTSPKYSPTSPSYSPSTPGYSPSSPTYSPSLRGGEGEAEEGEEE
AGRRKMKRRGKR
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atggggattctatgcaagaagacgctgggtgcctcctcggggtccatgatgcatttggcc
tggatggagctgggacacgagatagccgggaggttctacggcaacatccagactgtggtg
aacaactggctgctcctcgagggccacagcataggcatcggcgacactatttccgacccc
aacacctatagggtcatccaggacaccatcagaaaggccaaggaggatgtgattgacgtc
atccacaaggcccacaatgacgagctcgagccgaccccaggcaacaccctccgtcagacc
ttcgagaaccaggtcaaccgtatcctcaacgatgcccgcgacaagacgggaggctccgct
aagaagtccctgacggagtataacaacctgaaggcgatggtggtggcgggttccaagggc
tcgaacatcaacatctcgcaggtcatagcatgcgtgggccagcaaaacgtcgagggcaag
aggattcccttcggctttcgcaaacgcactctgccgcacttcatcaaggacgactatggg
ccagaatcgcgcgggtttgtcgagaactcctacctggccggcctgaccccctccgagttc
tatttccacgccatgggagggagggaggggctcatcgacacggcggtgaagacggcggag
acagggtacatccagcgccgtctgatcaaggccatggagagcgtgatggtcaactacgac
gcgacggttcggaacagcgtcggacaggtgatccagctgcgctacggagaggacggactg
gcgggggagttcgtggagtttcagtccctgccagtgatcaagctctcccatcgacgcttc
gaggacaactacagattcgacctgaccaacgagcgctacctgcggaaggtctacaccgag
ggggtcgtccgggagatcatcggctcccctgtggccatcagcaccctggaggaggagtgg
cggcagctgcaggaggatcgcgtggccctccggcagatctttccgaagggtgacactaag
gtcgtgcttccatgcaacctcgagcgcatgatctggaacgtgcagaaaatcttccacatc
aacaaacgctcgccctcggacctgtccccggtgaagatcgtgcagtcggttaacgagatg
ctggcgaggtgcgtgattgtgtcaggcgaggaccccatcagcaggcaggccaacgctaat
gccaccctgctcttccaatgcctggtacgctccaccctctgcaccaagaaagtggccgag
gatcacaggctgtccgcagaggccttcaactggctcatcggggagatcgagaccaggttt
tcccacgcgttagccagccccggggagatggtgggggccctggcagctcagagcctcggg
gaaccagcgacgcagatgacgctcaacaccttccactttgccggggtgtcgtcgaagaac
gtcaccctcggcgtgccaagactcaaggaaatcatcaacatctccaagcggcccaaggct
ccctccctgactgtgttcctgacgggcgcagcggcgagggatgcggagaaggcgaagaat
gtgctgtgtcgcctggaacataccactctgaggaaggtcacctccaacacggcaatctac
tacgacccagacccccagaacaccgtggtatccgaggaccaggagttcgtcaacgtgtac
tacgagatgccggactttgacgtgagccgcatttcgccctggttgctgaggattgaactg
gacaggaagaaaatgacagaccggaagctgaccatggaacagatatcacagaaaatcaac
agcgggttcggtgacgacctcaactgcatcttcaacgacgataacgcagagaagctggtc
ttgaggatcaggataattgtaggcgacgacaagctgggtggcagtgatgaccatgaagag
caggttgacaagatggaagacgacacgttcttacgctgcatcgaggctaacatgctgaac
gacctgagcctgcaaggggtggacagcatttccaaggtgtacatgcacttgccgcagacc
gacgagaagaagagaatcctcatcaacgagacgggggagttcaaggccgtggcggagtgg
ctgctcgagaccgacggcaccgcgctcatgacggtgctcagcgaacgccacgtcgacccc
atacgcaccacgtccaatgacatcctggaggtgttcaccgtgctgggtatcgaggccgtc
cgcaagtgcattgagaaggagatgaatgccgtcttgatgttctatggcctgtacgtgaac
taccgacacctggcgctgctgtgtgacgtcatgaccagcaaggggcatctcatggccatc
acgcgtcacgggattaaccgtcaggacaccggagcgctcatgaagtgctcgtttgaggag
tccgttgatgtcctaatggaggcggcagctgcggcggaagttgacccagtccggggggtg
tccgaggcgatcatgcttgggaagttaccccgcctagggacaggggcgttccagctgctt
ttggacgacgagaaatgcaagctggggatggaagtgccgctccccggaatgctgatgtcc
atgcccgccctccccagcgcctccccagccacctccccgaccacccacacccccgcccac
accccctggacctctgcctctaccccagttatgtccccatacggcgggtggactcctggg
ggtggggggatgactccaggggggccggccttctccccgacaccaaccctagacacccca
gggtattccccagcttggagcccccagccaggttccccaggttccccagccccgagtccc
tattacccctctccttccccagctctctccccatcctactgcccctcctccccagcctac
cagcccacctctcccagcctcaccccagctagtccaggatattccccgacctccccgacg
tattccccgacctccccacagtactccccaacttccccaagctattccccgacatctcct
tcatattccccaacctcaccttcatattccccgacctccccatcgtattccccaacgtcc
ccatcctattccccgacgagtccttcttactccccgacaagcccctcctattccccaacc
tccccaagttactcccctacctctccatcttattccccaacctcacctagttattccccg
acttccccaagttattccccaacatccccaagctattccccaacttcccctagctattcc
ccgacatccccgagctattctccaacctccccgagctatgccccgaattactccccgtcc
tcccctggatattccccgacttccccatcgtactccccaaccagcccctcctactccccc
tcctccccacagtactccccggcatccccaacctactccccaacttccccaaaatactcc
ccatcccctaaatactccccaacctccccgacatactcccccacctccccaagctattcc
ccaacctccccaaagtattccccaacctccccgacatactcccccacctccccaagctat
tccccaacctccccaaaatattctccaacttccccaacttactccccaaccagtccttct
tactcacctacatccccgtcctactccccgacttccccgacatactccccaacttcccca
aaatattccccgaccagcccatcgtattccccaagcacacccggttactccccctcctcc
ccaacctactcccctagtctgagaggtggggagggggaggcagaagagggggaagaggag
gcagggaggaggaagatgaagaggaggggtaagcgataa
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