Etheostoma spectabile (orangethroat darter): 116670742
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Entry
116670742 CDS
T08457
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03020
RNA polymerase
esp04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
116670742 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
116670742 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esp03021
]
116670742 (polr3a)
Enzymes [BR:
esp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
116670742 (polr3a)
Transcription machinery [BR:
esp03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
116670742 (polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
116670742
NCBI-ProteinID:
XP_032357271
LinkDB
All DBs
Position
21:complement(16489107..16510626)
Genome browser
AA seq
1386 aa
AA seq
DB search
MVKEQFRETDVAQKISHICFGIKSAEQIRQQAHIQVVSKNLYSQDTKHTPLSYGVLDHRM
GTSEKDRPCLTCGKNLADCLGHYGYLDLELPCFHVGYFKATIGILQMICKTCSSIMLTKE
DKLQFMDLIKRPNLAYLQKRGLKKKISDKCRKKTICLNCSAFNGPVKKCGLLKIIHEKYK
TNKKVVDVFVSDFLQSFDTAIEHNKVVEPLLTRAQENLNPLVVLNMFKRIPQEDIPLLLM
NPEAGKPADLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMTG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPERVNKANLELLRKRVRNGPEVHPGANF
IQNRHTQIKRFLKYGNREKIAQELRFGDVVERHLMDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRSKTCQIVASILVGTDEKIRICLPRPAIMKPMALWTGKQI
FSLILKPSKDCPVKANLRTKGKQYCGKGEDLCHNDSYVVIHNSELMCGSLDKGTLGSGSK
NNIFYILLRDWGQLEAANAMSRLARLAPVFLSNRGFSIGIGDVTPGQGLLKAKQDLLDDG
YKKCDEYIEALSTGKLQQQPGCTAEETLEALILRELSVIRDRAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVADSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDVIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNMRAVYVCQDEPALSQNELVLTADVIMKRADFLC
CRETFLEEIKNFIKSISERIKKTRDKYGINDNGTSEPKVLYQLDRITPTQLEKFLETCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKNI
STPIITAHLDMEDDADFARLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLL
RLEVNAETVRYSICMSKLRVKPGDIAVHGEAVVCVSPRENSKSSMYYVLQSLKEELPKVV
VQGIPEVSRAVIHIDEQSSKTMYKLLVEGDNLRSVMATHGVKGSRTTSNNTYEVEKTLGI
EAARSTIINEIQYTMVNHGMSIDRRHVMLLADLMSYKGEILGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYFDKRLVCGVSECIIMGIPMNIGTGLFKLLPRLTGSPLQSKGLSSLTV
QTSIYL
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagttcagagagacagatgtggcccaaaaaataagccacatctgcttc
gggatcaaatctgctgaacagatacgtcagcaggcccacattcaggtggtcagtaagaat
ctgtacagccaagacaccaaacacactccactatcctatggagtgttggaccaccgtatg
ggcaccagtgagaaagacagaccatgtttgacatgtgggaagaatctggcagattgcctg
ggacattacggctacttggatctggagctgccatgttttcacgtgggctatttcaaagcc
acaataggaatcttacagatgatttgcaagacatgctccagcataatgctgacgaaagag
gacaaactgcagttcatggatttaataaaaaggcccaacctggcctatctccagaaacga
gggttgaagaagaagatctctgataaatgccgcaaaaagacaatctgtctaaattgttct
gcttttaatggaccagtgaaaaagtgtggcctgcttaagatcatccatgagaagtataaa
acaaacaagaaggtggtggatgtttttgtgtcagatttcctgcagtcctttgatactgcc
attgagcacaacaaagtggtggaacctctgctgaccagagcacaggaaaacctgaaccca
ctggtggtgctaaacatgttcaagaggattccccaagaagacattcccctgctgctgatg
aaccctgaggcggggaaacctgcagaccttattctcacccgcctcctggtgcctcctctc
tgcatacgaccatctgtggtcagcgacctaaagtcaggtaccaacgaggacgacctcacc
atgaagctcacagagataatcttcctcaacgatgtcatcaaaaagcaccgaatgacaggg
gcgaagacccagatgatcatggaggactgggacttccttcagctgcagtgtgctctttac
atcaacagtgagctttctggcatccccctcaacatggcacctaagaaatggaccagaggc
tttgttcagagacttaaggggaaacaaggtcgattcagaggaaacctctcaggaaaaaga
gtggacttctctggcagaactgtcatttctcccgacccaaacctgaggatcgatgaggtg
gctgtccccgtgcatgtggccaaaatcctgacgtaccctgagagggtgaacaaagccaat
ctggagctactgaggaaacgggtccgcaatggtcctgaggttcatcccggagccaatttt
atccagaatcgtcacactcagataaaaaggtttttaaaatatggaaaccgtgagaagata
gctcaggagctcaggtttggtgatgtggtggagaggcacttgatggacggagacatcgtc
ctcttcaatcgacaaccctccctgcacaaactcagcatcatggcccacatcgccagagtc
aaacctcacaggacgtttcggttcaacgagtgtgtgtgcaccccttacaatgccgacttt
gatggtgatgaaatgaaccttcatcttcctcagactgaagaagccaaagctgaggccctc
gttctgatggggacaaaagcgaatcttgtcactccaagaaatggcgaacctctgattgct
gctattcaggactttctgacaggtgcctacctcttgacgctgaaggacactttctttgac
agatcaaaaacctgtcagatagtggcatcaatccttgtgggcacagatgaaaaaatcaga
atctgtctcccccgcccggctatcatgaagcccatggctctgtggacgggcaaacagatc
ttcagccttattctgaagccgagtaaggactgtcccgtcaaggcgaacctgcggaccaag
ggcaaacagtactgtggcaagggagaggatctctgtcacaacgactcatacgtggtgatt
cacaacagtgagctgatgtgtggtagcttggacaagggcactttggggtccggctccaag
aacaacatcttctacatcctgctaagagactggggacagctggaggctgccaacgccatg
tcccgcctcgcaagacttgctccagtgttcctctccaaccgtggcttttctattggcatc
ggtgatgtgacacctggccagggtctgctgaaggccaagcaggacttgctggatgacggt
tacaaaaagtgtgatgaatacatcgaagctctatccacgggaaagctgcaacagcagcca
ggctgcacagcagaggagactttggaggctctcattttgagagagctgtccgtcatcaga
gaccgagctggcagtgcctgcctcagggagcttgacaagagcaacagccctctgatcatg
gctctttgcggctccaaaggatctttcattaatatctctcagatgattgcctgtgtgggc
cagcaggccataagtggctctagagtacctgatggttttgagaaccgctccctgcctcac
tttgaaaagcactcaaaactgcctgctgctaaaggctttgtggccgacagcttctattct
ggcctgacgcccacagagtttttctttcacaccatggctggccgggagggtctggtggac
acggctgtgaaaacggcagagactggatatatgcagagacgtttggtgaagtccctggag
gatttgtgctcacaatacgacctgacagtacgcagctccactggcgacgtcatccaattt
atttatggcggcgatggtctggatccagctgccatggagggcaaggatgagccgctggag
tttaagagagtcctagacaacatgcgggcggtctatgtgtgtcaagatgagccggcactc
agtcaaaacgagctggtcctcactgctgatgtcatcatgaagagagctgacttcttgtgc
tgcagagagaccttcttggaggagataaagaactttattaagagcatctcagaaaggatc
aagaagaccagagacaagtacggcatcaacgacaatggcaccagcgagccaaaagttctt
tatcagctggaccgcataacccccacccagctggagaagttccttgaaacctgcagagac
aagtacatgagagctcagatggagccaggctcagcagtaggggccctgtgtgcccagagc
attggagagcccggtactcagatgaccctgaaaaccttccactttgctggtgtagcgtcc
atgaacatcactctgggggtgcctcgcatcaaagagatcatcaatgcctcaaagaacatc
agcacccctataatcactgctcatttggatatggaagacgacgctgactttgcccggctg
gtaaagggaaggatcgagaaaactcttctaggagagatttctgagtacatagaagaggtt
tttctaccagacgactgtttcatcctggtgaaattgtcattggagagaataaggctgctg
cgtctggaggtaaatgcagaaacggtgcgttactccatttgcatgtctaaactacgagtg
aaaccaggggacatcgctgtgcacggcgaggcggtggtgtgtgtgtctccacgagagaac
agcaaaagctccatgtactatgtgctgcagtcattaaaagaggagcttcctaaggtggtt
gttcaaggcatacctgaagtctcccgagctgtcattcacattgacgaacagagcagcaaa
accatgtacaaactcctggtggagggggacaacctgagatctgtcatggcaacgcacgga
gtgaagggaagcaggaccacgtcaaacaacacctatgaggttgagaagacgttgggtatt
gaggcagctagatctactataatcaatgagatccagtacaccatggtgaaccatggaatg
agcattgaccggcgtcatgtcatgcttctagcagatctcatgtcctacaagggggagata
ctgggaatcaccaggtttggtttagccaaaatgaaggagagtgtcctcatgctggcctcc
tttgaaaaaacagcggatcatctctttgatgctgcctactttgacaaaagactcgtctgt
ggtgtgtctgagtgcatcattatggggatacctatgaatattggaacaggactgtttaag
ctcctaccaaggctgacaggcagccctctccagtcaaaaggcctctcctctttgacagtg
cagacttccatatacctctaa
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integrated database retrieval system
