Etheostoma spectabile (orangethroat darter): 116689261
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Entry
116689261 CDS
T08457
Symbol
cdk7
Name
(RefSeq) cyclin-dependent kinase 7
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03022
Basal transcription factors
esp03420
Nucleotide excision repair
esp04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116689261 (cdk7)
09124 Replication and repair
03420 Nucleotide excision repair
116689261 (cdk7)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
116689261 (cdk7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
esp01001
]
116689261 (cdk7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esp03021
]
116689261 (cdk7)
03019 Messenger RNA biogenesis [BR:
esp03019
]
116689261 (cdk7)
03400 DNA repair and recombination proteins [BR:
esp03400
]
116689261 (cdk7)
Enzymes [BR:
esp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
116689261 (cdk7)
2.7.11.23 [RNA-polymerase]-subunit kinase
116689261 (cdk7)
Protein kinases [BR:
esp01001
]
Serine/threonine kinases: CMGC group
CDK family
116689261 (cdk7)
Transcription machinery [BR:
esp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
116689261 (cdk7)
Messenger RNA biogenesis [BR:
esp03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
116689261 (cdk7)
DNA repair and recombination proteins [BR:
esp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
116689261 (cdk7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Seadorna_VP7
ABC1
Kinase-like
Haspin_kinase
APH
Motif
Other DBs
NCBI-GeneID:
116689261
NCBI-ProteinID:
XP_032371619
LinkDB
All DBs
Position
5:9028199..9034931
Genome browser
AA seq
343 aa
AA seq
DB search
MALDVKSRTKRYEKLDFLGEGQFATVYKARDKTNDTIVAIKKIKVGHRTEAKDGINRTAL
REIKLLQELHHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDTSLVLTPANIKAYILM
TLQGLEYMHQHWVLHRDLKPNNLLLDGNGVLKLADFGLAKAFGSPNRVYTHQVVTRWYRS
PELLFGARMYGVGVDMWAVGCILAELLLRIPFLAGDSDLDQLTKIFEALGTPTEETWPGM
SSLPDYVSFKIFPGTPLEHIFSAAGDDLLELLQSFFTFNPLTRTTATQALTMRYFSNRPA
PTPGPQLPRPNCAAEALREKETICLKRKLEGPETAIMKKKLIF
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttgatgtaaaatccagaactaagcgatacgagaaactggatttcctcggagag
ggtcagttcgccacagtgtacaaagccagggacaaaacgaatgataccatagttgccatt
aaaaagattaaggttggccacagaactgaggctaaagatggtattaataggaccgctctt
cgtgagatcaaactgctgcaagaactgcatcatccaaatattattgggctgctggatgcc
tttggacacaaatccaacatcagcctggtgtttgatttcatggaaaccgatctggaggtg
atcatcaaagacaccagcctagtcctgactccagccaacatcaaagcctacattctaatg
actctacagggattagagtatatgcaccaacactgggtcctacacagggatctgaagccc
aataatctgctgttagatggcaacggagtgttgaagttggctgattttggtttggccaaa
gcatttggcagccccaacagagtctacacacatcaagttgttaccaggtggtaccgctcc
cctgagctcctgtttggtgccaggatgtacggtgtgggtgttgacatgtgggcagtggga
tgcatcttggcagagttactccttcggataccattccttgctggagactccgaccttgac
cagctaactaagatctttgaggctcttgggacgcccacagaagaaacatggccgggaatg
agtagtctaccagattatgtgtctttcaaaatattccctggcacacctctggaacatata
tttagtgcagctggagacgacttactagagctgctacagagcttcttcacctttaacccc
ttgacgaggaccacagcaacacaggctctgacgatgagatacttcagtaatcgacctgct
cccactcctggtccccaactcccccgacccaactgtgcagctgaggctctgagggagaag
gaaacaatctgcctcaagaggaaactcgagggcccagagacagctataatgaagaagaag
ctcattttctga
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