Etheostoma spectabile (orangethroat darter): 116689294
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Entry
116689294 CDS
T08457
Symbol
mmp2
Name
(RefSeq) 72 kDa type IV collagenase
KO
K01398
matrix metalloproteinase-2 (gelatinase A) [EC:
3.4.24.24
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
116689294 (mmp2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
esp01002
]
116689294 (mmp2)
Enzymes [BR:
esp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.24 gelatinase A
116689294 (mmp2)
Peptidases and inhibitors [BR:
esp01002
]
Metallo peptidases
Family M10
116689294 (mmp2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_4
Reprolysin_5
DUF4953
Motif
Other DBs
NCBI-GeneID:
116689294
NCBI-ProteinID:
XP_032371680
LinkDB
All DBs
Position
1:complement(25687392..25702806)
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AA seq
658 aa
AA seq
DB search
MGFPTIFSCRRIVLKVFLVQFIAFQATYAAPSPIIRFPGDDTTPKTDKEVALHYLNKFYG
CPQDRCNLMVLKDTLKKMQKFFSLQETGEIDAKTVEIMKKPRCGVPDVANYNFFHRKPMW
QKKDITYRILGYSPDLDEEVINDAFFRAFKVWSDVSPLSFTRLMDGEADIMINFGRNEHG
DGYPFDGKDGLLAHAFAPGPGIGGDSHFDDDEQWTLGDGQVVKVKYGNADGEFCKFPFLF
MGTEYNSCTAQGRDDGFLWCSTTYNFDEDGKYGFCPHELLFTIAGNADGAACKFPFTFLG
EKYDACTTQGRDDGYRWCATTENYDQDKTFGFCPETAMSTVGGNAEGSPCVFPFTFLGDT
YDSCTSSGRSDGKMWCASTKSYDDDRKWGFCPDQGYSLFLVAAHEFGHALGLEHSQDPGA
LMAPIYTYTKDFRLPDDDIKGIQELYGVPTDKPLPPTRGPVTPMDICKEPLVFDAVAQIR
GETFFFKDRFLFRSVNFRSKPNGPMLVATYWPDLPAKIDAAYENPVEEKTVFFSGNEMWV
YKADELERGYPKRISSLDLPTDLQQIDAVFNFRKNRKTYLFAGDKFWRYDEDNKKMDLGF
PKLIADSWNGIPDGIDAAFSLNGIDYSYFFKDNHYFKLEDSSLKIVKLGEITKDWLGC
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgggctttccgacgatatttagttgtcgccggattgttctcaaggtgtttttggttcag
ttcatcgcctttcaagcaacatatgctgctccttcgcctataatcaggtttcctggagac
gatactactcccaaaacagacaaagaggttgctttgcactatctgaataagttttatgga
tgcccgcaagacagatgtaacctaatggtgctaaaggacaccctgaagaaaatgcaaaag
ttcttctctctgcaagaaactggagagattgatgccaaaactgtggaaatcatgaaaaag
ccccgctgtggcgtcccagatgtggccaactacaatttcttccacaggaaacccatgtgg
cagaagaaagacataacttacagaatccttggctacagtcctgacctggatgaggaagtc
ataaatgacgctttcttcagagccttcaaagtatggagtgacgtctccccactctcgttt
acccgcctcatggacggagaggctgacatcatgattaattttggccgcaatgagcacgga
gatggttacccctttgacggcaaagatggcctcttggctcatgccttcgctccagggccg
ggaattgggggggactcccactttgatgatgatgagcagtggacactgggagacggtcaa
gtggtaaaggtaaaatatggcaatgctgatggggagttctgtaaattccccttcctgttc
atgggcactgagtacaacagctgcacagcccagggccgtgatgatggcttcctgtggtgc
tcaaccacatacaatttcgatgaagatggcaaatatggattttgcccccatgaattacta
ttcaccatcgctggaaacgcagatggcgctgcatgtaaattccctttcacctttctggga
gagaagtatgatgcatgcaccactcaaggcagggatgatgggtaccgctggtgtgccacc
actgagaactatgaccaggacaaaacctttgggttctgccctgaaactgccatgtccacg
gtgggcggaaacgcagagggaagcccctgtgtcttccccttcaccttcttgggtgacacc
tacgactcctgtacctcatctggacgcagcgatggtaaaatgtggtgcgcttccaccaag
agttatgatgacgaccgcaaatggggattctgtccagaccaaggctacagtttgttcctg
gtggcagcccatgagtttggtcatgcccttggcttggagcactctcaggaccccggagca
ttgatggcccctatttacacttacaccaaagacttcagacttcctgatgatgacattaaa
ggcatccaagagctctacggtgtgccgacagacaagccgttgcctccaacccggggtcca
gtcactccaatggacatctgtaaagagccacttgtctttgatgctgtagcacagatcaga
ggagagaccttcttcttcaaggacaggttcctgttcaggtcagtaaacttcagaagcaag
cccaacggccctatgctggtggccacctactggccagacctgcctgccaagatagatgct
gcctatgaaaacccagtggaggaaaaaacagtgttcttctcaggcaacgagatgtgggtc
tacaaagccgatgagctggagagaggctatcccaagaggatttcaagtcttgatctaccc
accgacctgcagcaaattgacgctgtcttcaactttaggaagaacaggaagacttacctg
tttgctggggacaaattctggagatacgatgaagataataagaaaatggatcttggcttc
cccaaacttattgctgactcctggaatggaatcccagatggcatagatgctgccttcagt
cttaatggcattgattacagttacttcttcaaagacaaccactatttcaaactggaagac
agcagcttgaagattgtcaaattgggtgaaatcacaaaggactggctcggttgttga
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