Etheostoma spectabile (orangethroat darter): 116689426
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Entry
116689426 CDS
T08457
Symbol
prdm6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp00310
Lysine degradation
esp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
116689426 (prdm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esp03000
]
116689426 (prdm6)
03036 Chromosome and associated proteins [BR:
esp03036
]
116689426 (prdm6)
Enzymes [BR:
esp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
116689426 (prdm6)
Transcription factors [BR:
esp03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
116689426 (prdm6)
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
116689426 (prdm6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_jaz
zf-C2H2_11
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
116689426
NCBI-ProteinID:
XP_032371844
LinkDB
All DBs
Position
5:12676200..12790469
Genome browser
AA seq
643 aa
AA seq
DB search
MLKPGDASGSAFLKVDPSYLQHWQQLFPQSQLKAPLAPPPPPPDRLSIPMDSLRPSRLHS
HLLASTHCTSSSSSTSSSSSSSAAAAAAAAALTPSSSISISTSAGISQLPVPQQIALFGQ
ALAPVCGGPGGPGGGGGGGGGGDLMVVVPPENQHGHNPAAGLLHQAKEQSCGGVGVVSSS
VKSSGGGGGGEEGGKAASSRFKLTSEELDYYLYGQQRMEIIPLSNHTGEVNNRCDMCADN
RNGECPMHGPLHSLRRLVGTSSTAAPVTLPDVPDWLRDLPREVCLCTSTVPGLGYGICAS
QRIPQGTWIGPFQGVPLLLDKLHSGAVRNSRHLWEIYDAEGTLQHFIDGNDPSKSSWMRY
IRCARHCGEQNMMVVQYRSCIFYRACMDIPRGTELLVWYNDSYTSFFGIPLQCIAQDENL
NVPTTVMEAMTRQESLQTFSKNGKPSSSSSSSSSTPSATLMRSMVFPHSPCPRNFSLLDK
VGVGIQSDSSFSQLGSKNQRVLASPTSTSQLSSDFSDWHLWKCGQCFKTFTQRILLQMHV
CPQNPDRPYQCGHCSQSFSQPSDLRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHT
GEKPFKCERCDRSFTQATQLSRHQRLPNECKPVNESSESIEVD
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagccgggcgacgcaagcggctcggccttcttgaaggtggacccgtcctacctg
cagcactggcagcagctcttcccccagtcgcagctgaaggctcctctggccccgccgccg
cctccgcctgaccgcctctccatccccatggacagcctgcgcccatcccgcctgcacagc
cacctcctggcctccacacactgcacctcctcgtcttcatccacatcctcctcctcttct
tcttccgcagcagcagcagcagcagcagcagctctaaccccatcctcctccatctccatc
tccacctcggcagggatctcccagctgcccgtcccccagcagatcgcactctttgggcag
gcgttggctccggtgtgtggcgggcctggaggaccagggggaggaggaggaggaggagga
ggaggagatctgatggtggttgtgcccccggagaaccaacatggtcacaacccagcagcg
gggcttctccatcaggccaaagagcagagctgtgggggggtcggcgtggtgtcctccagc
gtgaagagcagcggaggaggaggaggaggagaggagggtggcaaagcagcgtcgtccagg
ttcaagctgacgtcggaggagctggactactacctgtacggacagcagaggatggagatc
atcccactgagcaatcacacgggagaggtcaacaaccgttgtgacatgtgtgcagataac
aggaacggcgagtgtccgatgcacggccctcttcactctctgcgtcgactcgtcggcacc
agcagcacggcagcgcctgtcaccctgccggatgtccctgattggctcagagatctgccc
agagaggtgtgtctgtgcaccagtaccgttcctggtctgggttacgggatctgtgcgtct
cagaggatccctcagggaacctggatcggcccgtttcagggggtccctctgctgctggac
aaactgcattctggagcggtccgaaacagcagacacctgtgggagatctatgatgcagag
gggacgttacagcactttattgatggtaatgatcccagtaaatccagttggatgaggtac
atccgctgtgccagacactgtggggagcagaacatgatggttgtacagtacaggtcctgt
atcttttacagagcgtgtatggatatccccagaggaacagagctgctggtttggtacaat
gactcctacacttccttcttcggcataccgctgcagtgcatcgctcaggacgaaaactta
aacgttccaaccacggtgatggaagcaatgactagacaggaatcactccaaaccttcagc
aaaaacggcaaaccctcgtcttcctcctcttcctcctcttccactccctccgccactctc
atgcgctccatggtcttcccccattctccctgccctaggaatttctccctgttggacaag
gttggggttgggattcagtcggactccagtttcagccagttgggttcaaagaaccaacga
gtcctggcgagtccgacctccaccagccagctaagcagtgacttcagcgactggcacctg
tggaagtgtggccagtgcttcaaaacgttcacccagaggattctgctgcagatgcacgtc
tgtccacagaatccagacagaccataccagtgtggccactgctcccagtccttctcccag
ccatcagatttgaggaaccacgtggtgacgcactcgagtgaccgacccttcaaatgtgga
tactgcggccgtgcgtttgctggtgccacaacgctcaacaaccacatccgcacgcacacc
ggggagaagccgttcaagtgtgagcgttgtgaccgcagcttcacacaggccactcagctc
agccgccaccagcgacttcccaacgagtgtaaaccggtgaatgagagcagcgagtccatt
gaggtggattaa
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