Etheostoma spectabile (orangethroat darter): 116690819
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Entry
116690819 CDS
T08457
Name
(RefSeq) hemicentin-1-like
KO
K06499
carcinoembryonic antigen-related cell adhesion molecule
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
esp03037
]
116690819
04147 Exosome [BR:
esp04147
]
116690819
04090 CD molecules [BR:
esp04090
]
116690819
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
esp00537
]
116690819
Cilium and associated proteins [BR:
esp03037
]
Other cilia and associated proteins
Stereociliary proteins
116690819
Exosome [BR:
esp04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
116690819
Exosomal proteins of bladder cancer cells
116690819
CD molecules [BR:
esp04090
]
Proteins
116690819
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
esp00537
]
Antigens
116690819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
Ig_4
C2-set_2
V-set_CD47
Ig_6
Lep_receptor_Ig
C1-set
PKD
Motif
Other DBs
NCBI-GeneID:
116690819
NCBI-ProteinID:
XP_032373880
LinkDB
All DBs
Position
6:12336946..12375335
Genome browser
AA seq
1362 aa
AA seq
DB search
MEKNTEGTLTIVLLVLIQGVLASGAVEVQPSINPAVVGTSVTLSLSPPTALKSGSWAVGE
SLILTWLGDQQAVFPSYTGRASVNVLTGALTLSSVTVADSGVYMVQSSDAQLKANASIAV
LEPISNVTLRANQTELVEFNSSATAACSVSSGSSLSFLWMNGSSEATASNRVQLADRNST
LTIANVTRYDQGPFRCLVSNPVSNGTSNPVNFTISYGPDTMTLTVNRQNTTSFLIGSNLT
MLCSVQSNPPAQLMWTFRGEYVNTTGPLLELFNVSENQSGAYSCLAFNNHTNTNSNITVH
IMIANWNLSQPESSLAVEKTPTNKKLRRNMESPVVFVLLLVATIFTAGASFQIYASENPL
PVGDNVTLSSQNPITTGAWMFNNEMIVMIYPGGQITTNTWINRVTFNLTTSSLTIMSLQL
EDSGVYTLQGINSFRAQLSLSVQVPISNVSMRANATNLVEFNDTAVLMCSVLNGSSLSYV
WLNGSSVVTTGSMVQLSNGGATLTIVSVTRYDQGPFRCNVSNGVSQEVSLPVLLNISYGP
SNTTMTIMPMRSTYITGSNITLSCSADSLPPAMIQWMLDGMYLNQSGPQLQLQKVQKSNS
GNYQCLIYNTVTLRFSSKSAMISILEPIGAVVVNNTGGPVILHERLILHCEATGVVASYQ
WWRNGQPITTDNTTIIENKTLIILSVQLSDNGNYQCQAFNSVSNMTSSPYMVEVNYGPQT
PTIMGPNMAKTGDNATFSCYASSNPTASYKWFFNDSLVAHTSQYVTPLLTKKMSGTYTCM
AFNNITGKNSTAYTMLTVLAPVYLGINKNVGGQPIQNHTFTALTCEASGDVDSIIWMYGG
SQLYAGNTRNFSMDRATLTFDPVMISDNGNYQCKASNPLSSSLSQNFTLEVFYGPQMPTI
MGPNMAKTGDNATFSCYASSXXXXSYKWFFNDSLVANTSQYVTPLLTKEMSGTYTCMAFN
XXXXKNSTAYTMLTVFDSLKYMYIETPMTAAIAGNSYYLMCNVSGPAGVIYWMKNGEPLH
EDNRTVFSMDKKTVTFNQLRQNDTGFYQCMAIYAGGNMTSAPYMLIVNFGPETPIIEGPT
FAEKGHYAVFECFAMSTPPSQYSWWFNGSEVSNTSTFKTDLLSLNMSGEYTCMAYNYITK
KNSTNSKILTVVEPIKSVMIRNNTIPINSENFTLTCDVTGPYAMIYWIKDNMKLNMTNLT
ATPHMSYYIKNNMLHFTPLTMHSDGTYQCVATNHAGQHESPQYRLLVNFGPLSVAISGPR
SAEVNQLVSFNCSANSRPHSNFQWFFNNNSVALNTGSVLTFIAKKGTEGNYTCNAMNPVT
NITKSDTKPFTVSGHASAFHFPSQGVLMLMGLFALSVPVLFS
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaatactgaaggaaccctgaccattgtattgctggttttaattcaaggtgtt
ctggcctctggtgctgtggaggtccagccctccatcaaccctgctgtagttgggacctct
gtgacgctgtctctgtctcctccgaccgctctgaaaagtggaagctgggcagtgggagag
tccctcatcctcacctggctgggagaccagcaggccgtcttccccagttacaccggcagg
gcgtcagtcaatgtcctcactggagctctaaccctgagctccgtcacggtggcagactcg
ggagtctacatggtacagagcagtgacgcccagcttaaggccaatgcttctatcgctgtt
ctagagcccatctcaaatgtgaccctgagagccaatcaaactgagctggtggagttcaac
agttcagccaccgctgcctgctccgtctcttctggatcctctctctctttcctctggatg
aacggcagctctgaggctacagccagtaacagagttcaactcgctgatagaaactccact
ctcacaatagctaatgtgacccgctacgaccagggaccgttcaggtgtcttgtttctaat
cctgtcagtaatggaaccagtaatccagtaaactttactatcagctatggtccagatacc
atgacgctaaccgtgaacagacagaacaccacttcgtttctcattggttccaatctaact
atgctatgttcagtacagtccaatcctcctgctcagcttatgtggactttcagaggagag
tatgtgaacaccacaggtcctttgttggagctgttcaatgtcagcgagaaccaaagcgga
gcatattcctgcctggccttcaacaatcacaccaacacgaacagcaatatcaccgtacac
atcatgatagcaaattggaatttatcacagccagagtcaagtttagctgtcgagaagact
ccaaccaataagaaactgaggcgcaatatggagtctccagtggtgtttgtcctgctcctg
gtcgcgacaatcttcacagcaggtgcaagttttcagatttatgcctctgaaaacccgtta
ccagtgggagacaatgtcacactttccagccagaacccgattaccacaggggcatggatg
tttaacaatgaaatgattgtgatgatatacccgggaggtcaaatcacaactaacacttgg
attaacagagttactttcaatttaaccacttcatcattgactataatgtcactacagctg
gaggactctggagtgtacacattacagggaataaattcttttcgtgctcagttatcactg
tcagtccaagtgcctatttcaaatgtgtctatgagggcaaatgcaaccaacctggtggag
ttcaatgacacagcagttctcatgtgctctgtgctcaacggctcgtccctgtcttatgtt
tggttaaacggcagctctgtggttacaaccggtagtatggtacagctcagcaatggaggc
gccactctcaccatagtcagtgtaacccgctatgatcaggggccgttcaggtgcaatgtg
tccaatggtgtgagccaagaagtcagtctccctgtacttctgaacatcagctatggtcca
agtaacacaacaatgacgatcatgcccatgagatccacctacataacaggatctaacatc
acactgtcatgctcagctgactcccttcctccagcgatgatccagtggatgctcgatggg
atgtatctaaatcagtctggcccacagcttcaactacagaaggttcaaaagagcaactcg
ggaaattaccaatgcttaatttacaacacagtcacgctccggttcagcagcaaaagtgca
atgatcagtattttagagccaataggagcagtagtggtgaataacacaggtggaccagta
atacttcatgagagattaattctgcattgtgaagcgactggagttgttgccagttatcaa
tggtggagaaatggtcaacctattactactgacaatacaacaataattgagaacaagaca
ctgattatcttatcagtccaactatcagataatgggaattatcagtgtcaggcttttaat
tctgtgagcaacatgaccagcagcccctacatggttgaagtaaactatggaccgcagacg
ccaactataatggggccaaatatggcgaagacaggagacaatgccacattcagctgctat
gcatcatcaaaccctaccgcctcctacaaatggttcttcaatgattctctagtggcccat
acgtcacagtatgtcacacctcttcttaccaaaaaaatgagtggaacgtacacctgcatg
gccttcaacaacatcactgggaaaaacagcaccgcctacacgatgctcactgttttggct
ccagtatacttgggcatcaataaaaatgtcggcggtcagccgatccagaaccacacgttc
actgctttaacctgtgaggcatctggagatgtggattccattatctggatgtatggtggg
tcccaactgtatgctggaaacaccagaaacttctcaatggaccgagccaccctcaccttt
gatcctgtcatgatctctgacaatggaaattatcagtgtaaagcttccaacccactcagc
agctcattaagccaaaactttacgctggaagttttctatggaccgcaaatgccaactata
atggggccaaatatggcaaagacaggagacaatgccacattcagctgctatgcatcatca
aannnnnnnnnntcctacaaatggttcttcaatgattctctagtggccaatacgtcacag
tatgtcacacctcttcttaccaaagaaatgagtggaacgtacacctgcatggccttcaac
annnnnnnnnngaaaaacagcaccgcctacacgatgctcactgtttttgattctttaaaa
tatatgtacatagaaacacccatgactgctgccatagcaggtaattcttattatctaatg
tgcaatgtgagtggacctgctggggttatttactggatgaaaaatggtgagccactgcat
gaagacaacagaactgttttctcaatggataagaagacagtcaccttcaaccaactaaga
caaaatgatactgggttctaccagtgtatggctatttatgctggtgggaacatgaccagc
gctccttacatgctcattgtgaactttggaccagaaacacccataattgaagggccaact
tttgctgagaaaggacattacgctgtttttgaatgttttgccatgtcgacacctcctagt
cagtacagctggtggttcaatggctctgaggtgtccaatacttcaacgtttaaaactgac
cttctgtctttaaatatgagtggagaatacacctgcatggcttataattatatcacaaaa
aagaacagcacaaactccaagatactcacagtcgttgagccaattaagtcagtgatgatc
agaaacaacaccattccaataaactctgaaaacttcactctcacttgtgatgttactggg
ccctatgccatgatctactggataaaggacaacatgaaactcaacatgaccaacctcacc
gcaacccctcacatgtcctactacattaaaaacaacatgctgcacttcactccattgacg
atgcacagtgatgggacatatcagtgtgtcgctaccaatcatgctggtcaacatgaaagc
cctcaatacaggctcctggtgaactttggccctctgagtgtggcgatctctggtccacgt
tcagctgaagttaaccaactagtgtccttcaattgctctgctaattctcggccacattcc
aacttccagtggttctttaacaataactcagtggctctcaatactggctctgtattgact
ttcattgcaaagaaagggactgaaggaaactacacgtgtaacgcaatgaaccctgtgacc
aacatcacaaagtccgataccaaaccctttactgtcagtggtcacgcctcggctttccat
ttcccatcccaaggcgttctgatgttgatgggtctgtttgctttgtctgtgcctgtgctg
ttcagctaa
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integrated database retrieval system
