Etheostoma spectabile (orangethroat darter): 116691873
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Entry
116691873 CDS
T08457
Symbol
lamb2
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-2
KO
K06243
laminin, beta 2
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04510
Focal adhesion
esp04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116691873 (lamb2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116691873 (lamb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
LAMININ_IV_B
Laminin_N
F5_F8_type_C
Laminin_II
DUF745
Motif
Other DBs
NCBI-GeneID:
116691873
NCBI-ProteinID:
XP_032375649
LinkDB
All DBs
Position
7:complement(21382854..21431530)
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AA seq
1787 aa
AA seq
DB search
MQASLVMLVCVLAAAVGQEPDQSHGCAHGSCYPATGNLLVGREKNLKASSTCGMRKKEPY
CIVSHLQDEKKCFDCDSRRPYDPVYNTINHRIENVITTFKPHRKKSWWQSENGKSDVFIQ
LDLEAEFHYTHLIMTFKTFRPAAMLIERSADFGRTWKVYRYFSHDCATTFPGVSQGPLRN
INDVICESRYSDIEPSTEGEVIYRVLDPAISIEDPYSPSIQNQLKITNLRVNFTKLHTLG
DNLLDPRAEIKEKYYYAIYELVVRGNCFCYGHASECAPINGIRDDIEGMVHGRCVCNHNT
KGLNCEQCDDFHNDLPWRPAEGRNTNACRKCNCNGHSTMCHFDMAVYLAMGNVSGGVCDD
CQHXXXXMGRNCEMCKPFYYKDPVKDIRDPQVCIACDCDPDGSQNGGMCDSHTDPSLGML
GGQCRCKANVEGPRCDKCKTGFFGLSADNPQGCQPCRCDHRGTVSGSSQCDPVSGDCFCK
RLVTGRSCDQCLPEHWALSHDLNGCRGCECDIGGALDNHCSMESGQCRCRSHMTGRQCTQ
VESRYFFMALDHFLYEAELAKMGQGCTLETREHQPGRPATWTGVGFALVPEGGTLEFLIS
NIPYSMEYDLLIRYESQMPRDWEDVQITVIRPGLIPTSSPCGNTIPDDDRLTVSLPAGAR
FMVPPQAVCLERGVTYTLRFEFRRYQDANSILNGAANAVLLVDSIALMPRHSSMEMFNAG
DPASNNRKQTYERYRCHEGAKSVTRPLMSDTCAKLITSMSAIINDGALPCNCDPQGSVSA
MCDVRGGQCHCRPNVIGQRCDQCAPGTYGFGPSGCIACSCSLEGSVTRLCDKFTGQCQCR
PGAFGQRCDGCQAGHWGFPSCRPCQCNGHADACDQRTGACLNCRDNTGGDKCDRCASGYY
GNPVLGKASSGQCRPCPCPDGPNSGRHFAASCYQDNRNRQIICNCNQGYTGARCEECAPG
YYGNPSQPGGRCQPCQCNNNIDMSDMDACNRQTGECRKCLYNTEGTNCGICKSGYFGDAS
RRNCRKCTCNFLGTDSSQCMEREDCVCQRVSGQCQCLPNVIGLPCDHCAPNHWNLASGRG
CEPCGCDPNNSVTSSCNEFTGQCQCRDGFGGKTCTDCQENYWGDPRTQCRACDCDWRGIE
TSQCNRVTGHCVCQQGVSGVRCDQCARGFSGQFPDCKPCHQCFGDWDRIVQDLAVRTKTL
AERAHEIQTTGLTGAYEKVFRDLEAKLAQAQGIVNARNATAAAVAILMELIEELRAQIGE
TTDTLNRLEGDLTIVQDSNSEASKELSALEREAKELNLTSEQLHRQLDILKNSNFLGAYD
SIRSSYNRSCDAERRANESTTTRPSTVSQSADTRRRTERLIAAKKDDFNRKNAANKRGLG
DLNTRAQGLDLKKINEKVCGSPGDAPCEESPCGGAGCRDDEGNRHCGGLNCNGAVTAADN
ALEGAKHTEKELNKAMGEVEGLFIKVADAKTKAEEAKGKAQAALDKATATKKKVEHSNND
LRDLIKQIRDFLTQEGADPDSIEAVANHVLELSIPASSLQIRHLADEIKERVRSLSNVDA
ILEQTQDDVRKAEKLLLDAKRARHSAEEVKTTAETVKQALVDAKTAQTSAEKAIAIAKAD
IGETEARLAQIESETSNSEKDLNDAMDRLGTLGQEINALKTKRANNSMAAARAEETATMA
RDKANEAKQILDGQLTDKYHEVQQRVDTKAKAVQDAKKRAESLRDEAKKLLKDAQNKLRR
LAELEKNYEENQKRLEGKARQLDGLEDKMKAILNDINKQIQIYNTCQ
NT seq
5364 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcgtcactggtaatgctcgtctgcgtcctggctgctgccgttggtcaggagcct
gaccaaagccacggctgtgcccatggcagctgttacccagcaacggggaacttgctggtt
ggacgagagaagaacctgaaggcctcatccacatgtgggatgaggaaaaaagagccctat
tgcatcgtcagtcatctgcaggatgagaagaagtgcttcgactgtgactctagacggcca
tatgacccagtgtacaacaccatcaatcaccggatagagaacgttatcaccaccttcaaa
cctcaccgcaagaagtcctggtggcagtccgagaatggaaagtccgatgtctttatccag
ctggatctggaagctgagtttcattatactcacttgattatgacttttaagacctttcgt
ccagcggccatgctgattgaacggtcggcagattttggtcgtacctggaaggtctaccgc
tacttttcccacgactgcgctactacctttcccggagtctcccagggtcctttgcgtaac
attaatgatgtcatctgtgagtcacgctactctgacattgagccgtcaacagagggagag
gtcatctacagagtgttggatccagccatcagtattgaggatccatacagcccgagcatc
cagaaccagctgaagatcactaacttgagagtgaactttaccaagcttcacacactggga
gacaacttgctggacccgagagctgaaatcaaagaaaagtattactacgccatatatgag
cttgttgttcgcggaaattgcttttgctatggccacgcctcagagtgcgcccccatcaat
ggcatcagggatgatatagaaggaatggttcacggcaggtgtgtgtgcaaccataatacc
aagggtttgaactgcgagcaatgtgatgacttccacaacgaccttccctggagaccagct
gaagggcgcaacaccaacgcttgcaggaagtgtaactgcaatggccactcaaccatgtgc
cactttgacatggcggtgtatttggcaatgggaaacgtcagcggaggagtgtgtgacgac
tgtcagcacaannnnnnnnncatgggacgcaactgtgagatgtgcaaacctttctactac
aaagaccctgttaaggatatcagggacccacaggtctgcatagcttgtgactgcgaccca
gatggttctcagaatggaggcatgtgcgacagccacactgacccttccctcggcatgttg
ggaggtcagtgccgttgcaaggccaatgtcgaggggccgcgctgcgacaagtgtaagact
ggcttctttggcctaagcgctgacaaccctcagggctgccaaccttgccggtgtgaccac
aggggaacagtgtcaggtagctcccagtgtgacccagtcagtggagactgcttctgcaag
cgtcttgtcactggacgcagctgtgaccagtgtttgccagaacactgggctctgagccat
gacttaaacggctgccgaggctgcgagtgtgatatcggaggagccctggacaaccactgc
tccatggagagtggtcagtgtcgctgtcgcagtcacatgacaggacgccagtgtacgcag
gtggagtctagatatttcttcatggctctggatcacttcctgtatgaggctgagttggcc
aaaatggggcagggctgtacattggagaccagagaacaccagccgggtcgccccgccaca
tggacgggtgttgggttcgctctagtacctgagggtggcactctggagttcctaatcagt
aacatcccctactccatggaatatgatctgctcatccgctatgagtcacagatgccccga
gactgggaggatgtacaaataaccgtgatccgtccgggcctgattcctaccagcagcccc
tgtggaaacaccatcccagatgatgacagactcactgtctctctgccagctggagccagg
tttatggtcccccctcaggctgtgtgtctggagagaggtgtgacttacaccctccgcttt
gagttcagacgctatcaggatgccaacagcatcctcaatggagcggccaacgctgtcctc
cttgtggactctattgccttgatgccacgccactcctccatggagatgttcaacgcaggg
gatcctgcttctaacaacaggaagcagacctatgagcggtaccgctgccacgagggggct
aagagtgtaacccgcccactgatgagtgacacctgtgccaagctaatcaccagcatgtca
gctatcattaatgacggggctctgccttgtaattgcgatcctcaggggtccgttagcgcc
atgtgtgatgtccgtgggggccaatgtcactgcaggcccaatgtgattggtcaacgctgt
gatcagtgtgctcctggaacttacggctttggaccctcaggctgtatagcctgcagttgc
agcttggaaggctctgtgactcgactttgtgacaagttcactggtcagtgtcagtgccgc
cctggagcgtttggtcagcgctgcgacggatgccaggcgggtcactggggcttccccagc
tgccgaccctgccagtgtaacggacacgccgacgcgtgcgaccaaaggaccggagcctgc
ctcaactgcagggacaacactggaggagacaagtgtgacaggtgtgccagtggttactat
ggtaaccccgttttgggcaaagcatctagtggtcagtgtcgcccgtgcccgtgtcccgac
ggccccaacagtggacgccactttgctgcatcttgttaccaggacaaccgtaacagacaa
attatctgcaactgtaaccagggttacacaggagcccgatgtgaggaatgtgctccaggt
tattatggcaacccctctcaacccggagggcgctgccagccgtgccagtgcaacaacaac
atagacatgtcagacatggatgcttgcaataggcagaccggagagtgcagaaaatgcctt
tacaacactgagggcaccaactgtggcatctgcaagagcggctatttcggggacgcttcg
cgccgcaactgcaggaagtgtacatgtaacttcctgggtactgacagcagccagtgcatg
gagcgtgaggactgtgtgtgccagcgtgtctcagggcagtgccagtgtctaccaaacgtc
ataggtctgccatgtgaccactgcgcccccaaccactggaacctggccagcgggagaggc
tgtgaaccctgcggctgtgatcctaacaactcagtcacctcctcatgtaacgagtttact
gggcagtgtcagtgtcgtgacggctttggtgggaagacctgcacagactgtcaggagaac
tactggggagaccccaggacacagtgcagagcttgtgactgtgactggcgcggcattgag
acctctcagtgtaaccgggtgaccgggcactgtgtctgccagcagggggtgtctggtgtc
cgctgtgaccagtgtgccagaggcttttctggccagttccccgactgcaaaccctgtcat
cagtgcttcggggactgggatcgcattgtgcaggacctggcagtgcgtacaaagactctg
gcagaacgagcccacgagattcagaccacggggcttaccggggcctatgaaaaggtcttt
agggacctagaggccaaactggcacaagctcagggcattgtcaacgcacgcaatgccact
gctgcagccgttgctatcctaatggagcttattgaagaacttagagcgcagatcggcgag
accactgacaccctaaaccgtctggaaggggacctaaccatcgtccaggacagcaactcg
gaggcaagcaaggagctgagtgctctggagagagaggctaaagaactaaacctcacttca
gagcagctacaccgccaactggatatcctaaaaaactccaatttcctaggtgcgtacgac
agcatccgtagctcctacaacaggtcctgtgatgcggagcggcgcgccaatgaatcaaca
accacccggcccagcacagtcagccaatctgcagacactcgccgccgtaccgagcgtctc
atcgccgccaagaaggacgacttcaaccgtaaaaatgctgcaaacaaacgtgggcttgga
gacctcaacaccagagcacagggcctggacttgaagaagatcaatgagaaggtgtgcggc
tccccgggtgatgctccctgtgaggaaagtccttgtgggggggcaggttgccgtgacgat
gaagggaaccgtcactgtggaggcctaaactgtaacggtgctgtaacagcagctgacaat
gccctggagggagccaaacacactgagaaggagctgaacaaagctatgggagaggtggag
ggactctttatcaaggtggcagacgccaagaccaaggcagaggaggccaagggtaaagcc
caagcagctctggacaaagccaccgccaccaagaagaaagtggagcactccaacaatgac
ttgagagacctcatcaaacagatcagagacttcctcactcaggagggtgcagacccagac
agcattgaggcagtggcaaaccacgtgttggagctctccatccctgcttcatcccttcaa
atcagacatcttgctgatgaaatcaaggaacgggttcgcagcctttcaaacgtggacgcc
atcctggagcagacgcaggatgatgtccgcaaggccgagaagctgctgctggatgccaag
agggcaaggcacagtgctgaggaggtgaagaccacagcagagacagtgaaacaggccctg
gtggatgcgaagactgcccagacatcagcagagaaggccatagctatagccaaagctgac
attggggagactgaagcccgactggcacagattgagtcagagacatccaacagtgagaag
gacctgaatgatgccatggaccgcctgggcacactgggacaggagattaatgccctgaag
accaaacgtgccaacaacagcatggcagctgccagagccgaggagacagccaccatggca
cgagacaaagcaaatgaagccaagcagattctagatggccagctgacagataaataccat
gaggtgcagcagcgggttgacacaaaggccaaggctgtgcaggatgccaagaaaagggca
gagagcctcagagacgaagcaaagaaactactgaaagatgcccagaacaagctccggaga
ctagcagagctggagaaaaactatgaggagaaccagaagaggttggaggggaaagctcgt
caactggacggcttagaggacaagatgaaagccatcctcaatgacatcaacaaacaaatc
cagatctataacacatgccagtaa
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integrated database retrieval system
